Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir/ref_genome.fa
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f3/6c314033764322236759227d58d2a4/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f3/6c314033764322236759227d58d2a4/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a3/66f99fe47335a4786a254ba5de1183/aih-tih-sc-55b175-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/ae7cf8c95bfbf12fabbb5af89a6ad7/aih-tih-sc-55b175-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam.bai
==> STAGING COMPLETE (5 inputs)

ls: *.sam: No such file or directory
ls: *.csi: No such file or directory
ls: *.crai: No such file or directory