Using standard /usr/local/lib/perl5/site_perl/auto/share/dist/AGAT/agat_config.yaml file
------------------------------------------------------------------------------
| Another GFF Analysis Toolkit (AGAT) - Version: v1.2.0 |
| https://github.com/NBISweden/AGAT |
| National Bioinformatics Infrastructure Sweden (NBIS) - www.nbis.se |
------------------------------------------------------------------------------
------ Start parsing ------
-------------------------- parse options and metadata --------------------------
=> Accessing the feature_levels YAML file
Using standard /usr/local/lib/perl5/site_perl/auto/share/dist/AGAT/feature_levels.yaml file
=> Attribute used to group features when no Parent/ID relationship exists (i.e common tag):
* locus_tag
* gene_id
=> merge_loci option deactivated
=> Machine information:
This script is being run by perl v5.32.1
Bioperl location being used: /usr/local/lib/perl5/site_perl/Bio/
Operating system being used: linux
=> Accessing Ontology
No ontology accessible from the gff file header!
We use the SOFA ontology distributed with AGAT:
/usr/local/lib/perl5/site_perl/auto/share/dist/AGAT/so.obo
Read ontology /usr/local/lib/perl5/site_perl/auto/share/dist/AGAT/so.obo:
4 root terms, and 2596 total terms, and 1516 leaf terms
Filtering ontology:
We found 1861 terms that are sequence_feature or is_a child of it.
--------------------------------- parsing file ---------------------------------
=> Number of line in file: 36167
=> Number of comment lines: 0
=> Fasta included: No
=> Number of features lines: 36167
=> Number of feature type (3rd column): 2
* Level1: 0 =>
* level2: 0 =>
* level3: 2 => exon CDS
* unknown: 0 =>
=>Check because only level3 features:
* Number of feature with Parent attribute:0
* Number of feature with a common attribute:36167
=> Some common attributes and some Parent attributes missing.
/!\ For features where both are missing A single Level2 features (e.g. mRNA) and a single level1 (e.g. gene) will be created by AGAT, and all level3 feautres (e,g, CDS,exon) will be attached to them. This is probably not what you want...
see B. 2.2 and 3. at https://agat.readthedocs.io/en/latest/agat_how_does_it_work.html
/!\ For features where the common attribute or the parent attribute is missing, it would be fine as long as you do not expect isoforms in your annotation (Eukaryote). see B. 4. at https://agat.readthedocs.io/en/latest/agat_how_does_it_work.html
!! You might try to fix the issue by choosing a common tag attribute to use in order to group the features correctly (parameter --ct in agat_convert_sp_gxf2gxf.pl).
=> Version of the Bioperl GFF parser selected by AGAT: 2
------ End parsing (done in 6 second) ------
------ Start checks ------
---------------------------- Check1: feature types -----------------------------
----------------------------------- ontology -----------------------------------
All feature types in agreement with the Ontology.
------------------------------------- agat -------------------------------------
AGAT can deal with all the encountered feature types (3rd column)
------------------------------ done in 0 seconds -------------------------------
------------------------------ Check2: duplicates ------------------------------
None found
------------------------------ done in 0 seconds -------------------------------
-------------------------- Check3: sequential bucket ---------------------------
Nothing to check as sequential bucket!
------------------------------ done in 0 seconds -------------------------------
--------------------------- Check4: l2 linked to l3 ----------------------------
L1 and L2 created:
AC005670.3--SP2 HAVANA gene 34704 47350 . + . FI_gene_label "SP2^ENSG00000167182.15" ; ID "AC005670.3--SP2^SP2^ENSG00000167182.15" ; ccdsid "CCDS11521.2" ; exon_id "ENSE00002729406.2" ; exon_number 1 ; gene_id "AC005670.3--SP2^SP2^ENSG00000167182.15" ; gene_name SP2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150196.4" ; havana_transcript "OTTHUMT00000316777.3" ; hgnc_id "HGNC:11207" ; level 2 ; orig_coord_info "chr17,47896287,47896293,+" ; protein_id "ENSP00000365931.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "AC005670.3--SP2^ENST00000376741.5" ; transcript_name "SP2-201" ; transcript_support_level 1 ; transcript_type protein_coding
AC005670.3--SP2 HAVANA mRNA 34704 47350 . + . FI_gene_label "SP2^ENSG00000167182.15" ; ID "AC005670.3--SP2^ENST00000376741.5" ; Parent "AC005670.3--SP2^SP2^ENSG00000167182.15" ; ccdsid "CCDS11521.2" ; exon_id "ENSE00002729406.2" ; exon_number 1 ; gene_id "AC005670.3--SP2^SP2^ENSG00000167182.15" ; gene_name SP2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150196.4" ; havana_transcript "OTTHUMT00000316777.3" ; hgnc_id "HGNC:11207" ; level 2 ; orig_coord_info "chr17,47896287,47896293,+" ; protein_id "ENSP00000365931.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "AC005670.3--SP2^ENST00000376741.5" ; transcript_name "SP2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
AC005972.3--FBXL20 HAVANA gene 13944 38574 . + . FI_gene_label "FBXL20^ENSG00000108306.13" ; ID "AC005972.3--FBXL20^FBXL20^ENSG00000108306.13" ; ccdsid "CCDS32640.1" ; exon_id "ENSE00002727680.2" ; exon_number 1 ; gene_id "AC005972.3--FBXL20^FBXL20^ENSG00000108306.13" ; gene_name FBXL20 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179002.9" ; havana_transcript "OTTHUMT00000444315.4" ; hgnc_id "HGNC:24679" ; level 2 ; orig_coord_info "chr17,39401361,39401402,-" ; protein_id "ENSP00000264658.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "AC005972.3--FBXL20^ENST00000264658.11" ; transcript_name "FBXL20-201" ; transcript_support_level 1 ; transcript_type protein_coding
AC005972.3--FBXL20 HAVANA mRNA 13944 38574 . + . FI_gene_label "FBXL20^ENSG00000108306.13" ; ID "AC005972.3--FBXL20^ENST00000264658.11" ; Parent "AC005972.3--FBXL20^FBXL20^ENSG00000108306.13" ; ccdsid "CCDS32640.1" ; exon_id "ENSE00002727680.2" ; exon_number 1 ; gene_id "AC005972.3--FBXL20^FBXL20^ENSG00000108306.13" ; gene_name FBXL20 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179002.9" ; havana_transcript "OTTHUMT00000444315.4" ; hgnc_id "HGNC:24679" ; level 2 ; orig_coord_info "chr17,39401361,39401402,-" ; protein_id "ENSP00000264658.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "AC005972.3--FBXL20^ENST00000264658.11" ; transcript_name "FBXL20-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
AC005972.3--SKAP1 HAVANA gene 13108 30069 . + . FI_gene_label "SKAP1^ENSG00000141293.16" ; ID "AC005972.3--SKAP1^SKAP1^ENSG00000141293.16" ; ccdsid "CCDS32674.1" ; exon_id "ENSE00002733332.2" ; exon_number 1 ; gene_id "AC005972.3--SKAP1^SKAP1^ENSG00000141293.16" ; gene_name SKAP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178823.3" ; havana_transcript "OTTHUMT00000443432.2" ; hgnc_id "HGNC:15605" ; level 2 ; orig_coord_info "chr17,48430075,48430120,-" ; protein_id "ENSP00000338171.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "AC005972.3--SKAP1^ENST00000336915.11" ; transcript_name "SKAP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
AC005972.3--SKAP1 HAVANA mRNA 13108 30069 . + . FI_gene_label "SKAP1^ENSG00000141293.16" ; ID "AC005972.3--SKAP1^ENST00000336915.11" ; Parent "AC005972.3--SKAP1^SKAP1^ENSG00000141293.16" ; ccdsid "CCDS32674.1" ; exon_id "ENSE00002733332.2" ; exon_number 1 ; gene_id "AC005972.3--SKAP1^SKAP1^ENSG00000141293.16" ; gene_name SKAP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178823.3" ; havana_transcript "OTTHUMT00000443432.2" ; hgnc_id "HGNC:15605" ; level 2 ; orig_coord_info "chr17,48430075,48430120,-" ; protein_id "ENSP00000338171.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "AC005972.3--SKAP1^ENST00000336915.11" ; transcript_name "SKAP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
AC079610.2--IKZF2 HAVANA gene 7237 23374 . + . FI_gene_label "IKZF2^ENSG00000030419.16" ; ID "AC079610.2--IKZF2^IKZF2^ENSG00000030419.16" ; exon_id "ENSE00003626229.1" ; exon_number 1 ; gene_id "AC079610.2--IKZF2^IKZF2^ENSG00000030419.16" ; gene_name IKZF2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000133005.7" ; havana_transcript "OTTHUMT00000256594.1" ; hgnc_id "HGNC:13177" ; level 2 ; orig_coord_info "chr2,213150181,213150183,-" ; protein_id "ENSP00000342876.2" ; tag basic appris_alternative_1 ; transcript_id "AC079610.2--IKZF2^ENST00000342002.6" ; transcript_name "IKZF2-201" ; transcript_support_level 1 ; transcript_type protein_coding
AC079610.2--IKZF2 HAVANA mRNA 7237 23374 . + . FI_gene_label "IKZF2^ENSG00000030419.16" ; ID "AC079610.2--IKZF2^ENST00000342002.6" ; Parent "AC079610.2--IKZF2^IKZF2^ENSG00000030419.16" ; exon_id "ENSE00003626229.1" ; exon_number 1 ; gene_id "AC079610.2--IKZF2^IKZF2^ENSG00000030419.16" ; gene_name IKZF2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000133005.7" ; havana_transcript "OTTHUMT00000256594.1" ; hgnc_id "HGNC:13177" ; level 2 ; orig_coord_info "chr2,213150181,213150183,-" ; protein_id "ENSP00000342876.2" ; tag basic appris_alternative_1 ; transcript_id "AC079610.2--IKZF2^ENST00000342002.6" ; transcript_name "IKZF2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
AC092807.3--DDAH1 HAVANA gene 13647 23704 . + . FI_gene_label "DDAH1^ENSG00000153904.21" ; ID "AC092807.3--DDAH1^DDAH1^ENSG00000153904.21" ; ccdsid "CCDS705.1" ; exon_id "ENSE00001013010.7" ; exon_number 1 ; gene_id "AC092807.3--DDAH1^DDAH1^ENSG00000153904.21" ; gene_name DDAH1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000191181.3" ; havana_transcript "OTTHUMT00000029189.3" ; hgnc_id "HGNC:2715" ; level 2 ; orig_coord_info "chr1,85464743,85465045,-" ; protein_id "ENSP00000284031.8" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "AC092807.3--DDAH1^ENST00000284031.13" ; transcript_name "DDAH1-201" ; transcript_support_level 1 ; transcript_type protein_coding
AC092807.3--DDAH1 HAVANA mRNA 13647 23704 . + . FI_gene_label "DDAH1^ENSG00000153904.21" ; ID "AC092807.3--DDAH1^ENST00000284031.13" ; Parent "AC092807.3--DDAH1^DDAH1^ENSG00000153904.21" ; ccdsid "CCDS705.1" ; exon_id "ENSE00001013010.7" ; exon_number 1 ; gene_id "AC092807.3--DDAH1^DDAH1^ENSG00000153904.21" ; gene_name DDAH1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000191181.3" ; havana_transcript "OTTHUMT00000029189.3" ; hgnc_id "HGNC:2715" ; level 2 ; orig_coord_info "chr1,85464743,85465045,-" ; protein_id "ENSP00000284031.8" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "AC092807.3--DDAH1^ENST00000284031.13" ; transcript_name "DDAH1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ACOX1--SRP68 HAVANA gene 1012 18865 . + . FI_gene_label "ACOX1^ENSG00000161533.12" ; ID "ACOX1--SRP68^ACOX1^ENSG00000161533.12" ; ccdsid "CCDS11734.1" ; exon_id "ENSE00001419361.2" ; exon_number 1 ; gene_id "ACOX1--SRP68^ACOX1^ENSG00000161533.12" ; gene_name ACOX1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000180027.3" ; havana_transcript "OTTHUMT00000439500.3" ; hgnc_id "HGNC:119" ; level 2 ; orig_coord_info "chr17,75978965,75979073,-" ; protein_id "ENSP00000293217.4" ; tag basic MANE_Select appris_principal_2 CCDS ; transcript_id "ACOX1--SRP68^ENST00000293217.10" ; transcript_name "ACOX1-201" ; transcript_support_level 1 ; transcript_type protein_coding
ACOX1--SRP68 HAVANA mRNA 1012 18865 . + . FI_gene_label "ACOX1^ENSG00000161533.12" ; ID "ACOX1--SRP68^ENST00000293217.10" ; Parent "ACOX1--SRP68^ACOX1^ENSG00000161533.12" ; ccdsid "CCDS11734.1" ; exon_id "ENSE00001419361.2" ; exon_number 1 ; gene_id "ACOX1--SRP68^ACOX1^ENSG00000161533.12" ; gene_name ACOX1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000180027.3" ; havana_transcript "OTTHUMT00000439500.3" ; hgnc_id "HGNC:119" ; level 2 ; orig_coord_info "chr17,75978965,75979073,-" ; protein_id "ENSP00000293217.4" ; tag basic MANE_Select appris_principal_2 CCDS ; transcript_id "ACOX1--SRP68^ENST00000293217.10" ; transcript_name "ACOX1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ACOX1--SRP68 HAVANA gene 21866 41438 . + . FI_gene_label "SRP68^ENSG00000167881.15" ; ID "ACOX1--SRP68^SRP68^ENSG00000167881.15" ; ccdsid "CCDS11738.1" ; exon_id "ENSE00002798223.2" ; exon_number 1 ; gene_id "ACOX1--SRP68^SRP68^ENSG00000167881.15" ; gene_name SRP68 ; gene_type protein_coding ; havana_gene "OTTHUMG00000180054.3" ; havana_transcript "OTTHUMT00000449487.2" ; hgnc_id "HGNC:11302" ; level 2 ; orig_coord_info "chr17,76072308,76072491,-" ; protein_id "ENSP00000312066.1" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "ACOX1--SRP68^ENST00000307877.7" ; transcript_name "SRP68-201" ; transcript_support_level 1 ; transcript_type protein_coding
ACOX1--SRP68 HAVANA mRNA 21866 41438 . + . FI_gene_label "SRP68^ENSG00000167881.15" ; ID "ACOX1--SRP68^ENST00000307877.7" ; Parent "ACOX1--SRP68^SRP68^ENSG00000167881.15" ; ccdsid "CCDS11738.1" ; exon_id "ENSE00002798223.2" ; exon_number 1 ; gene_id "ACOX1--SRP68^SRP68^ENSG00000167881.15" ; gene_name SRP68 ; gene_type protein_coding ; havana_gene "OTTHUMG00000180054.3" ; havana_transcript "OTTHUMT00000449487.2" ; hgnc_id "HGNC:11302" ; level 2 ; orig_coord_info "chr17,76072308,76072491,-" ; protein_id "ENSP00000312066.1" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "ACOX1--SRP68^ENST00000307877.7" ; transcript_name "SRP68-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ADK--ANK3 HAVANA gene 32496 99628 . + . FI_gene_label "ANK3^ENSG00000151150.22" ; ID "ADK--ANK3^ANK3^ENSG00000151150.22" ; ccdsid "CCDS7258.1" ; exon_id "ENSE00002724313.2" ; exon_number 1 ; gene_id "ADK--ANK3^ANK3^ENSG00000151150.22" ; gene_name ANK3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018288.16" ; havana_transcript "OTTHUMT00000048201.5" ; hgnc_id "HGNC:494" ; level 2 ; orig_coord_info "chr10,60389425,60389538,-" ; protein_id "ENSP00000280772.1" ; tag basic MANE_Select CCDS ; transcript_id "ADK--ANK3^ENST00000280772.7" ; transcript_name "ANK3-201" ; transcript_support_level 1 ; transcript_type protein_coding
ADK--ANK3 HAVANA mRNA 32496 99628 . + . FI_gene_label "ANK3^ENSG00000151150.22" ; ID "ADK--ANK3^ENST00000280772.7" ; Parent "ADK--ANK3^ANK3^ENSG00000151150.22" ; ccdsid "CCDS7258.1" ; exon_id "ENSE00002724313.2" ; exon_number 1 ; gene_id "ADK--ANK3^ANK3^ENSG00000151150.22" ; gene_name ANK3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018288.16" ; havana_transcript "OTTHUMT00000048201.5" ; hgnc_id "HGNC:494" ; level 2 ; orig_coord_info "chr10,60389425,60389538,-" ; protein_id "ENSP00000280772.1" ; tag basic MANE_Select CCDS ; transcript_id "ADK--ANK3^ENST00000280772.7" ; transcript_name "ANK3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ADK--ANK3 HAVANA gene 1023 22515 . + . FI_gene_label "ADK^ENSG00000156110.15" ; ID "ADK--ANK3^ADK^ENSG00000156110.15" ; exon_id "ENSE00001248887.4" ; exon_number 1 ; gene_id "ADK--ANK3^ADK^ENSG00000156110.15" ; gene_name ADK ; gene_type protein_coding ; havana_gene "OTTHUMG00000018506.4" ; havana_transcript "OTTHUMT00000529318.1" ; hgnc_id "HGNC:257" ; level 2 ; orig_coord_info "chr10,74151279,74151343,+" ; protein_id "ENSP00000286621.3" ; tag RNA_Seq_supported_only basic ; transcript_id "ADK--ANK3^ENST00000286621.7" ; transcript_name "ADK-201" ; transcript_support_level 1 ; transcript_type protein_coding
ADK--ANK3 HAVANA mRNA 1023 22515 . + . FI_gene_label "ADK^ENSG00000156110.15" ; ID "ADK--ANK3^ENST00000286621.7" ; Parent "ADK--ANK3^ADK^ENSG00000156110.15" ; exon_id "ENSE00001248887.4" ; exon_number 1 ; gene_id "ADK--ANK3^ADK^ENSG00000156110.15" ; gene_name ADK ; gene_type protein_coding ; havana_gene "OTTHUMG00000018506.4" ; havana_transcript "OTTHUMT00000529318.1" ; hgnc_id "HGNC:257" ; level 2 ; orig_coord_info "chr10,74151279,74151343,+" ; protein_id "ENSP00000286621.3" ; tag RNA_Seq_supported_only basic ; transcript_id "ADK--ANK3^ENST00000286621.7" ; transcript_name "ADK-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ADRM1--LAMA5 HAVANA gene 10152 47651 . + . FI_gene_label "LAMA5^ENSG00000130702.15" ; ID "ADRM1--LAMA5^LAMA5^ENSG00000130702.15" ; ccdsid "CCDS33502.1" ; exon_id "ENSE00001622903.1" ; exon_number 1 ; gene_id "ADRM1--LAMA5^LAMA5^ENSG00000130702.15" ; gene_name LAMA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000032908.6" ; havana_transcript "OTTHUMT00000080014.3" ; hgnc_id "HGNC:6485" ; level 2 ; orig_coord_info "chr20,62366949,62367245,-" ; protein_id "ENSP00000252999.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "ADRM1--LAMA5^ENST00000252999.7" ; transcript_name "LAMA5-201" ; transcript_support_level 1 ; transcript_type protein_coding
ADRM1--LAMA5 HAVANA mRNA 10152 47651 . + . FI_gene_label "LAMA5^ENSG00000130702.15" ; ID "ADRM1--LAMA5^ENST00000252999.7" ; Parent "ADRM1--LAMA5^LAMA5^ENSG00000130702.15" ; ccdsid "CCDS33502.1" ; exon_id "ENSE00001622903.1" ; exon_number 1 ; gene_id "ADRM1--LAMA5^LAMA5^ENSG00000130702.15" ; gene_name LAMA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000032908.6" ; havana_transcript "OTTHUMT00000080014.3" ; hgnc_id "HGNC:6485" ; level 2 ; orig_coord_info "chr20,62366949,62367245,-" ; protein_id "ENSP00000252999.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "ADRM1--LAMA5^ENST00000252999.7" ; transcript_name "LAMA5-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ADRM1--LAMA5 HAVANA gene 1905 7151 . + . FI_gene_label "ADRM1^ENSG00000130706.13" ; ID "ADRM1--LAMA5^ADRM1^ENSG00000130706.13" ; ccdsid "CCDS13496.1" ; exon_id "ENSE00003894119.1" ; exon_number 2 ; gene_id "ADRM1--LAMA5^ADRM1^ENSG00000130706.13" ; gene_name ADRM1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000032904.4" ; havana_transcript "OTTHUMT00000504216.2" ; hgnc_id "HGNC:15759" ; level 2 ; orig_coord_info "chr20,62303569,62303781,+" ; protein_id "ENSP00000253003.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "ADRM1--LAMA5^ENST00000253003.7" ; transcript_name "ADRM1-201" ; transcript_support_level 1 ; transcript_type protein_coding
ADRM1--LAMA5 HAVANA mRNA 1905 7151 . + . FI_gene_label "ADRM1^ENSG00000130706.13" ; ID "ADRM1--LAMA5^ENST00000253003.7" ; Parent "ADRM1--LAMA5^ADRM1^ENSG00000130706.13" ; ccdsid "CCDS13496.1" ; exon_id "ENSE00003894119.1" ; exon_number 2 ; gene_id "ADRM1--LAMA5^ADRM1^ENSG00000130706.13" ; gene_name ADRM1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000032904.4" ; havana_transcript "OTTHUMT00000504216.2" ; hgnc_id "HGNC:15759" ; level 2 ; orig_coord_info "chr20,62303569,62303781,+" ; protein_id "ENSP00000253003.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "ADRM1--LAMA5^ENST00000253003.7" ; transcript_name "ADRM1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
AKAP1--TEX14 HAVANA gene 22993 60801 . + . FI_gene_label "TEX14^ENSG00000121101.16" ; ID "AKAP1--TEX14^TEX14^ENSG00000121101.16" ; ccdsid "CCDS56042.1" ; exon_id "ENSE00001410784.1" ; exon_number 2 ; gene_id "AKAP1--TEX14^TEX14^ENSG00000121101.16" ; gene_name TEX14 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179245.2" ; havana_transcript "OTTHUMT00000445446.1" ; hgnc_id "HGNC:11737" ; level 2 ; orig_coord_info "chr17,58651866,58652001,-" ; protein_id "ENSP00000240361.8" ; tag basic appris_alternative_2 CCDS ; transcript_id "AKAP1--TEX14^ENST00000240361.12" ; transcript_name "TEX14-201" ; transcript_support_level 1 ; transcript_type protein_coding
AKAP1--TEX14 HAVANA mRNA 22993 60801 . + . FI_gene_label "TEX14^ENSG00000121101.16" ; ID "AKAP1--TEX14^ENST00000240361.12" ; Parent "AKAP1--TEX14^TEX14^ENSG00000121101.16" ; ccdsid "CCDS56042.1" ; exon_id "ENSE00001410784.1" ; exon_number 2 ; gene_id "AKAP1--TEX14^TEX14^ENSG00000121101.16" ; gene_name TEX14 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179245.2" ; havana_transcript "OTTHUMT00000445446.1" ; hgnc_id "HGNC:11737" ; level 2 ; orig_coord_info "chr17,58651866,58652001,-" ; protein_id "ENSP00000240361.8" ; tag basic appris_alternative_2 CCDS ; transcript_id "AKAP1--TEX14^ENST00000240361.12" ; transcript_name "TEX14-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
AKAP1--TEX14 ENSEMBL gene 4329 14316 . + . FI_gene_label "AKAP1^ENSG00000121057.13" ; ID "AKAP1--TEX14^AKAP1^ENSG00000121057.13" ; exon_id "ENSE00002192183.1" ; exon_number 2 ; gene_id "AKAP1--TEX14^AKAP1^ENSG00000121057.13" ; gene_name AKAP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000140369.6" ; hgnc_id "HGNC:367" ; level 3 ; orig_coord_info "chr17,57105465,57107178,+" ; protein_id "ENSP00000314075.3" ; tag basic ; transcript_id "AKAP1--TEX14^ENST00000314126.4" ; transcript_name "AKAP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
AKAP1--TEX14 ENSEMBL mRNA 4329 14316 . + . FI_gene_label "AKAP1^ENSG00000121057.13" ; ID "AKAP1--TEX14^ENST00000314126.4" ; Parent "AKAP1--TEX14^AKAP1^ENSG00000121057.13" ; exon_id "ENSE00002192183.1" ; exon_number 2 ; gene_id "AKAP1--TEX14^AKAP1^ENSG00000121057.13" ; gene_name AKAP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000140369.6" ; hgnc_id "HGNC:367" ; level 3 ; orig_coord_info "chr17,57105465,57107178,+" ; protein_id "ENSP00000314075.3" ; tag basic ; transcript_id "AKAP1--TEX14^ENST00000314126.4" ; transcript_name "AKAP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
AL136367.1--LRMDA HAVANA gene 8546 27813 . + . FI_gene_label "LRMDA^ENSG00000148655.15" ; ID "AL136367.1--LRMDA^LRMDA^ENSG00000148655.15" ; ccdsid "CCDS7351.1" ; exon_id "ENSE00001457957.1" ; exon_number 1 ; gene_id "AL136367.1--LRMDA^LRMDA^ENSG00000148655.15" ; gene_name LRMDA ; gene_type protein_coding ; havana_gene "OTTHUMG00000018532.5" ; havana_transcript "OTTHUMT00000048839.1" ; hgnc_id "HGNC:23405" ; level 2 ; orig_coord_info "chr10,75782976,75783022,+" ; protein_id "ENSP00000361577.1" ; tag basic CCDS ; transcript_id "AL136367.1--LRMDA^ENST00000372499.5" ; transcript_name "LRMDA-201" ; transcript_support_level 1 ; transcript_type protein_coding
AL136367.1--LRMDA HAVANA mRNA 8546 27813 . + . FI_gene_label "LRMDA^ENSG00000148655.15" ; ID "AL136367.1--LRMDA^ENST00000372499.5" ; Parent "AL136367.1--LRMDA^LRMDA^ENSG00000148655.15" ; ccdsid "CCDS7351.1" ; exon_id "ENSE00001457957.1" ; exon_number 1 ; gene_id "AL136367.1--LRMDA^LRMDA^ENSG00000148655.15" ; gene_name LRMDA ; gene_type protein_coding ; havana_gene "OTTHUMG00000018532.5" ; havana_transcript "OTTHUMT00000048839.1" ; hgnc_id "HGNC:23405" ; level 2 ; orig_coord_info "chr10,75782976,75783022,+" ; protein_id "ENSP00000361577.1" ; tag basic CCDS ; transcript_id "AL136367.1--LRMDA^ENST00000372499.5" ; transcript_name "LRMDA-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
AL353752.1--LRMDA HAVANA gene 8670 27937 . + . FI_gene_label "LRMDA^ENSG00000148655.15" ; ID "AL353752.1--LRMDA^LRMDA^ENSG00000148655.15" ; ccdsid "CCDS7351.1" ; exon_id "ENSE00001457957.1" ; exon_number 1 ; gene_id "AL353752.1--LRMDA^LRMDA^ENSG00000148655.15" ; gene_name LRMDA ; gene_type protein_coding ; havana_gene "OTTHUMG00000018532.5" ; havana_transcript "OTTHUMT00000048839.1" ; hgnc_id "HGNC:23405" ; level 2 ; orig_coord_info "chr10,75782976,75783022,+" ; protein_id "ENSP00000361577.1" ; tag basic CCDS ; transcript_id "AL353752.1--LRMDA^ENST00000372499.5" ; transcript_name "LRMDA-201" ; transcript_support_level 1 ; transcript_type protein_coding
AL353752.1--LRMDA HAVANA mRNA 8670 27937 . + . FI_gene_label "LRMDA^ENSG00000148655.15" ; ID "AL353752.1--LRMDA^ENST00000372499.5" ; Parent "AL353752.1--LRMDA^LRMDA^ENSG00000148655.15" ; ccdsid "CCDS7351.1" ; exon_id "ENSE00001457957.1" ; exon_number 1 ; gene_id "AL353752.1--LRMDA^LRMDA^ENSG00000148655.15" ; gene_name LRMDA ; gene_type protein_coding ; havana_gene "OTTHUMG00000018532.5" ; havana_transcript "OTTHUMT00000048839.1" ; hgnc_id "HGNC:23405" ; level 2 ; orig_coord_info "chr10,75782976,75783022,+" ; protein_id "ENSP00000361577.1" ; tag basic CCDS ; transcript_id "AL353752.1--LRMDA^ENST00000372499.5" ; transcript_name "LRMDA-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ARL17B--SP2 HAVANA gene 23536 36182 . + . FI_gene_label "SP2^ENSG00000167182.15" ; ID "ARL17B--SP2^SP2^ENSG00000167182.15" ; ccdsid "CCDS11521.2" ; exon_id "ENSE00002729406.2" ; exon_number 1 ; gene_id "ARL17B--SP2^SP2^ENSG00000167182.15" ; gene_name SP2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150196.4" ; havana_transcript "OTTHUMT00000316777.3" ; hgnc_id "HGNC:11207" ; level 2 ; orig_coord_info "chr17,47896287,47896293,+" ; protein_id "ENSP00000365931.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "ARL17B--SP2^ENST00000376741.5" ; transcript_name "SP2-201" ; transcript_support_level 1 ; transcript_type protein_coding
ARL17B--SP2 HAVANA mRNA 23536 36182 . + . FI_gene_label "SP2^ENSG00000167182.15" ; ID "ARL17B--SP2^ENST00000376741.5" ; Parent "ARL17B--SP2^SP2^ENSG00000167182.15" ; ccdsid "CCDS11521.2" ; exon_id "ENSE00002729406.2" ; exon_number 1 ; gene_id "ARL17B--SP2^SP2^ENSG00000167182.15" ; gene_name SP2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150196.4" ; havana_transcript "OTTHUMT00000316777.3" ; hgnc_id "HGNC:11207" ; level 2 ; orig_coord_info "chr17,47896287,47896293,+" ; protein_id "ENSP00000365931.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "ARL17B--SP2^ENST00000376741.5" ; transcript_name "SP2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ARL17B--SP2 HAVANA gene 1053 16124 . + . FI_gene_label "ARL17B^ENSG00000228696.10" ; ID "ARL17B--SP2^ARL17B^ENSG00000228696.10" ; ccdsid "CCDS54137.1" ; exon_id "ENSE00002352294.1" ; exon_number 2 ; gene_id "ARL17B--SP2^ARL17B^ENSG00000228696.10" ; gene_name ARL17B ; gene_type protein_coding ; havana_gene "OTTHUMG00000178031.2" ; havana_transcript "OTTHUMT00000440292.1" ; hgnc_id "HGNC:32387" ; level 2 ; orig_coord_info "chr17,46358250,46358397,-" ; protein_id "ENSP00000391751.2" ; tag basic CCDS ; transcript_id "ARL17B--SP2^ENST00000434041.6" ; transcript_name "ARL17B-201" ; transcript_support_level 1 ; transcript_type protein_coding
ARL17B--SP2 HAVANA mRNA 1053 16124 . + . FI_gene_label "ARL17B^ENSG00000228696.10" ; ID "ARL17B--SP2^ENST00000434041.6" ; Parent "ARL17B--SP2^ARL17B^ENSG00000228696.10" ; ccdsid "CCDS54137.1" ; exon_id "ENSE00002352294.1" ; exon_number 2 ; gene_id "ARL17B--SP2^ARL17B^ENSG00000228696.10" ; gene_name ARL17B ; gene_type protein_coding ; havana_gene "OTTHUMG00000178031.2" ; havana_transcript "OTTHUMT00000440292.1" ; hgnc_id "HGNC:32387" ; level 2 ; orig_coord_info "chr17,46358250,46358397,-" ; protein_id "ENSP00000391751.2" ; tag basic CCDS ; transcript_id "ARL17B--SP2^ENST00000434041.6" ; transcript_name "ARL17B-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ATE1--RET HAVANA gene 1453 19569 . + . FI_gene_label "ATE1^ENSG00000107669.18" ; ID "ATE1--RET^ATE1^ENSG00000107669.18" ; ccdsid "CCDS31300.1" ; exon_id "ENSE00001513271.3" ; exon_number 1 ; gene_id "ATE1--RET^ATE1^ENSG00000107669.18" ; gene_name ATE1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000019178.2" ; havana_transcript "OTTHUMT00000050739.1" ; hgnc_id "HGNC:782" ; level 2 ; orig_coord_info "chr10,121927844,121927949,-" ; protein_id "ENSP00000224652.6" ; tag basic appris_alternative_2 CCDS ; transcript_id "ATE1--RET^ENST00000224652.11" ; transcript_name "ATE1-201" ; transcript_support_level 1 ; transcript_type protein_coding
ATE1--RET HAVANA mRNA 1453 19569 . + . FI_gene_label "ATE1^ENSG00000107669.18" ; ID "ATE1--RET^ENST00000224652.11" ; Parent "ATE1--RET^ATE1^ENSG00000107669.18" ; ccdsid "CCDS31300.1" ; exon_id "ENSE00001513271.3" ; exon_number 1 ; gene_id "ATE1--RET^ATE1^ENSG00000107669.18" ; gene_name ATE1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000019178.2" ; havana_transcript "OTTHUMT00000050739.1" ; hgnc_id "HGNC:782" ; level 2 ; orig_coord_info "chr10,121927844,121927949,-" ; protein_id "ENSP00000224652.6" ; tag basic appris_alternative_2 CCDS ; transcript_id "ATE1--RET^ENST00000224652.11" ; transcript_name "ATE1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ATE1--RET HAVANA gene 22593 43213 . + . FI_gene_label "RET^ENSG00000165731.20" ; ID "ATE1--RET^RET^ENSG00000165731.20" ; ccdsid "CCDS53525.1" ; exon_id "ENSE00003744437.1" ; exon_number 1 ; gene_id "ATE1--RET^RET^ENSG00000165731.20" ; gene_name RET ; gene_type protein_coding ; havana_gene "OTTHUMG00000018024.7" ; havana_transcript "OTTHUMT00000358138.3" ; hgnc_id "HGNC:9967" ; level 2 ; orig_coord_info "chr10,43077259,43077331,+" ; protein_id "ENSP00000344798.4" ; tag basic CCDS ; transcript_id "ATE1--RET^ENST00000340058.6" ; transcript_name "RET-201" ; transcript_support_level 1 ; transcript_type protein_coding
ATE1--RET HAVANA mRNA 22593 43213 . + . FI_gene_label "RET^ENSG00000165731.20" ; ID "ATE1--RET^ENST00000340058.6" ; Parent "ATE1--RET^RET^ENSG00000165731.20" ; ccdsid "CCDS53525.1" ; exon_id "ENSE00003744437.1" ; exon_number 1 ; gene_id "ATE1--RET^RET^ENSG00000165731.20" ; gene_name RET ; gene_type protein_coding ; havana_gene "OTTHUMG00000018024.7" ; havana_transcript "OTTHUMT00000358138.3" ; hgnc_id "HGNC:9967" ; level 2 ; orig_coord_info "chr10,43077259,43077331,+" ; protein_id "ENSP00000344798.4" ; tag basic CCDS ; transcript_id "ATE1--RET^ENST00000340058.6" ; transcript_name "RET-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ATIC--LINC00607 HAVANA gene 1104 17831 . + . FI_gene_label "ATIC^ENSG00000138363.15" ; ID "ATIC--LINC00607^ATIC^ENSG00000138363.15" ; ccdsid "CCDS2398.1" ; exon_id "ENSE00001914660.2" ; exon_number 1 ; gene_id "ATIC--LINC00607^ATIC^ENSG00000138363.15" ; gene_name ATIC ; gene_type protein_coding ; havana_gene "OTTHUMG00000133023.8" ; havana_transcript "OTTHUMT00000256610.2" ; hgnc_id "HGNC:794" ; level 2 ; orig_coord_info "chr2,215312143,215312161,+" ; protein_id "ENSP00000236959.9" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "ATIC--LINC00607^ENST00000236959.14" ; transcript_name "ATIC-201" ; transcript_support_level 1 ; transcript_type protein_coding
ATIC--LINC00607 HAVANA mRNA 1104 17831 . + . FI_gene_label "ATIC^ENSG00000138363.15" ; ID "ATIC--LINC00607^ENST00000236959.14" ; Parent "ATIC--LINC00607^ATIC^ENSG00000138363.15" ; ccdsid "CCDS2398.1" ; exon_id "ENSE00001914660.2" ; exon_number 1 ; gene_id "ATIC--LINC00607^ATIC^ENSG00000138363.15" ; gene_name ATIC ; gene_type protein_coding ; havana_gene "OTTHUMG00000133023.8" ; havana_transcript "OTTHUMT00000256610.2" ; hgnc_id "HGNC:794" ; level 2 ; orig_coord_info "chr2,215312143,215312161,+" ; protein_id "ENSP00000236959.9" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "ATIC--LINC00607^ENST00000236959.14" ; transcript_name "ATIC-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ATP1B1--C1orf112 HAVANA gene 19213 44329 . + . FI_gene_label "C1orf112^ENSG00000000460.17" ; ID "ATP1B1--C1orf112^C1orf112^ENSG00000000460.17" ; ccdsid "CCDS1285.1" ; exon_id "ENSE00003596167.1" ; exon_number 3 ; gene_id "ATP1B1--C1orf112^C1orf112^ENSG00000000460.17" ; gene_name C1orf112 ; gene_type protein_coding ; havana_gene "OTTHUMG00000035821.9" ; havana_transcript "OTTHUMT00000087126.3" ; hgnc_id "HGNC:25565" ; level 2 ; orig_coord_info "chr1,169800906,169800971,+" ; protein_id "ENSP00000286031.6" ; tag basic appris_principal_1 CCDS ; transcript_id "ATP1B1--C1orf112^ENST00000286031.10" ; transcript_name "C1orf112-201" ; transcript_support_level 1 ; transcript_type protein_coding
ATP1B1--C1orf112 HAVANA mRNA 19213 44329 . + . FI_gene_label "C1orf112^ENSG00000000460.17" ; ID "ATP1B1--C1orf112^ENST00000286031.10" ; Parent "ATP1B1--C1orf112^C1orf112^ENSG00000000460.17" ; ccdsid "CCDS1285.1" ; exon_id "ENSE00003596167.1" ; exon_number 3 ; gene_id "ATP1B1--C1orf112^C1orf112^ENSG00000000460.17" ; gene_name C1orf112 ; gene_type protein_coding ; havana_gene "OTTHUMG00000035821.9" ; havana_transcript "OTTHUMT00000087126.3" ; hgnc_id "HGNC:25565" ; level 2 ; orig_coord_info "chr1,169800906,169800971,+" ; protein_id "ENSP00000286031.6" ; tag basic appris_principal_1 CCDS ; transcript_id "ATP1B1--C1orf112^ENST00000286031.10" ; transcript_name "C1orf112-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ATP1B1--C1orf112 HAVANA gene 1994 10446 . + . FI_gene_label "ATP1B1^ENSG00000143153.13" ; ID "ATP1B1--C1orf112^ATP1B1^ENSG00000143153.13" ; ccdsid "CCDS1276.1" ; exon_id "ENSE00001903510.3" ; exon_number 1 ; gene_id "ATP1B1--C1orf112^ATP1B1^ENSG00000143153.13" ; gene_name ATP1B1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000034590.4" ; havana_transcript "OTTHUMT00000083695.3" ; hgnc_id "HGNC:804" ; level 2 ; orig_coord_info "chr1,169106830,169106926,+" ; protein_id "ENSP00000356789.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "ATP1B1--C1orf112^ENST00000367815.9" ; transcript_name "ATP1B1-201" ; transcript_support_level 1 ; transcript_type protein_coding
ATP1B1--C1orf112 HAVANA mRNA 1994 10446 . + . FI_gene_label "ATP1B1^ENSG00000143153.13" ; ID "ATP1B1--C1orf112^ENST00000367815.9" ; Parent "ATP1B1--C1orf112^ATP1B1^ENSG00000143153.13" ; ccdsid "CCDS1276.1" ; exon_id "ENSE00001903510.3" ; exon_number 1 ; gene_id "ATP1B1--C1orf112^ATP1B1^ENSG00000143153.13" ; gene_name ATP1B1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000034590.4" ; havana_transcript "OTTHUMT00000083695.3" ; hgnc_id "HGNC:804" ; level 2 ; orig_coord_info "chr1,169106830,169106926,+" ; protein_id "ENSP00000356789.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "ATP1B1--C1orf112^ENST00000367815.9" ; transcript_name "ATP1B1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
BCAS3--IKZF3 HAVANA gene 59653 69208 . + . FI_gene_label "IKZF3^ENSG00000161405.17" ; ID "BCAS3--IKZF3^IKZF3^ENSG00000161405.17" ; exon_id "ENSE00002692875.1" ; exon_number 1 ; gene_id "BCAS3--IKZF3^IKZF3^ENSG00000161405.17" ; gene_name IKZF3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000133250.5" ; havana_transcript "OTTHUMT00000257011.2" ; hgnc_id "HGNC:13178" ; level 2 ; orig_coord_info "chr17,39864120,39864126,-" ; protein_id "ENSP00000462791.1" ; transcript_id "BCAS3--IKZF3^ENST00000293068.9" ; transcript_name "IKZF3-201" ; transcript_support_level 1 ; transcript_type nonsense_mediated_decay
BCAS3--IKZF3 HAVANA mRNA 59653 69208 . + . FI_gene_label "IKZF3^ENSG00000161405.17" ; ID "BCAS3--IKZF3^ENST00000293068.9" ; Parent "BCAS3--IKZF3^IKZF3^ENSG00000161405.17" ; exon_id "ENSE00002692875.1" ; exon_number 1 ; gene_id "BCAS3--IKZF3^IKZF3^ENSG00000161405.17" ; gene_name IKZF3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000133250.5" ; havana_transcript "OTTHUMT00000257011.2" ; hgnc_id "HGNC:13178" ; level 2 ; orig_coord_info "chr17,39864120,39864126,-" ; protein_id "ENSP00000462791.1" ; transcript_id "BCAS3--IKZF3^ENST00000293068.9" ; transcript_name "IKZF3-201" ; transcript_support_level 1 ; transcript_type nonsense_mediated_decay
L1 and L2 created:
BCAS3--IKZF3 HAVANA gene 1437 56528 . + . FI_gene_label "BCAS3^ENSG00000141376.23" ; ID "BCAS3--IKZF3^BCAS3^ENSG00000141376.23" ; ccdsid "CCDS45749.1" ; exon_id "ENSE00003693165.1" ; exon_number 2 ; gene_id "BCAS3--IKZF3^BCAS3^ENSG00000141376.23" ; gene_name BCAS3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000180064.2" ; havana_transcript "OTTHUMT00000449578.1" ; hgnc_id "HGNC:14347" ; level 2 ; orig_coord_info "chr17,60679458,60679540,+" ; protein_id "ENSP00000375067.4" ; tag basic CCDS ; transcript_id "BCAS3--IKZF3^ENST00000390652.9" ; transcript_name "BCAS3-201" ; transcript_support_level 1 ; transcript_type protein_coding
BCAS3--IKZF3 HAVANA mRNA 1437 56528 . + . FI_gene_label "BCAS3^ENSG00000141376.23" ; ID "BCAS3--IKZF3^ENST00000390652.9" ; Parent "BCAS3--IKZF3^BCAS3^ENSG00000141376.23" ; ccdsid "CCDS45749.1" ; exon_id "ENSE00003693165.1" ; exon_number 2 ; gene_id "BCAS3--IKZF3^BCAS3^ENSG00000141376.23" ; gene_name BCAS3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000180064.2" ; havana_transcript "OTTHUMT00000449578.1" ; hgnc_id "HGNC:14347" ; level 2 ; orig_coord_info "chr17,60679458,60679540,+" ; protein_id "ENSP00000375067.4" ; tag basic CCDS ; transcript_id "BCAS3--IKZF3^ENST00000390652.9" ; transcript_name "BCAS3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
BCAS3--PPIAP55 HAVANA gene 1437 56528 . + . FI_gene_label "BCAS3^ENSG00000141376.23" ; ID "BCAS3--PPIAP55^BCAS3^ENSG00000141376.23" ; ccdsid "CCDS45749.1" ; exon_id "ENSE00003693165.1" ; exon_number 2 ; gene_id "BCAS3--PPIAP55^BCAS3^ENSG00000141376.23" ; gene_name BCAS3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000180064.2" ; havana_transcript "OTTHUMT00000449578.1" ; hgnc_id "HGNC:14347" ; level 2 ; orig_coord_info "chr17,60679458,60679540,+" ; protein_id "ENSP00000375067.4" ; tag basic CCDS ; transcript_id "BCAS3--PPIAP55^ENST00000390652.9" ; transcript_name "BCAS3-201" ; transcript_support_level 1 ; transcript_type protein_coding
BCAS3--PPIAP55 HAVANA mRNA 1437 56528 . + . FI_gene_label "BCAS3^ENSG00000141376.23" ; ID "BCAS3--PPIAP55^ENST00000390652.9" ; Parent "BCAS3--PPIAP55^BCAS3^ENSG00000141376.23" ; ccdsid "CCDS45749.1" ; exon_id "ENSE00003693165.1" ; exon_number 2 ; gene_id "BCAS3--PPIAP55^BCAS3^ENSG00000141376.23" ; gene_name BCAS3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000180064.2" ; havana_transcript "OTTHUMT00000449578.1" ; hgnc_id "HGNC:14347" ; level 2 ; orig_coord_info "chr17,60679458,60679540,+" ; protein_id "ENSP00000375067.4" ; tag basic CCDS ; transcript_id "BCAS3--PPIAP55^ENST00000390652.9" ; transcript_name "BCAS3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
CASC15--DST HAVANA gene 121194 228481 . + . FI_gene_label "DST^ENSG00000151914.21" ; ID "CASC15--DST^DST^ENSG00000151914.21" ; ccdsid "CCDS47443.1" ; exon_id "ENSE00002133064.1" ; exon_number 1 ; gene_id "CASC15--DST^DST^ENSG00000151914.21" ; gene_name DST ; gene_type protein_coding ; havana_gene "OTTHUMG00000014913.26" ; havana_transcript "OTTHUMT00000041022.4" ; hgnc_id "HGNC:1090" ; level 2 ; orig_coord_info "chr6,56642622,56642788,-" ; protein_id "ENSP00000244364.6" ; tag basic CCDS ; transcript_id "CASC15--DST^ENST00000244364.10" ; transcript_name "DST-201" ; transcript_support_level 1 ; transcript_type protein_coding
CASC15--DST HAVANA mRNA 121194 228481 . + . FI_gene_label "DST^ENSG00000151914.21" ; ID "CASC15--DST^ENST00000244364.10" ; Parent "CASC15--DST^DST^ENSG00000151914.21" ; ccdsid "CCDS47443.1" ; exon_id "ENSE00002133064.1" ; exon_number 1 ; gene_id "CASC15--DST^DST^ENSG00000151914.21" ; gene_name DST ; gene_type protein_coding ; havana_gene "OTTHUMG00000014913.26" ; havana_transcript "OTTHUMT00000041022.4" ; hgnc_id "HGNC:1090" ; level 2 ; orig_coord_info "chr6,56642622,56642788,-" ; protein_id "ENSP00000244364.6" ; tag basic CCDS ; transcript_id "CASC15--DST^ENST00000244364.10" ; transcript_name "DST-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
CCDC6--PRKG1 HAVANA gene 1001 16128 . + . FI_gene_label "CCDC6^ENSG00000108091.11" ; ID "CCDC6--PRKG1^CCDC6^ENSG00000108091.11" ; ccdsid "CCDS7257.1" ; exon_id "ENSE00001950758.3" ; exon_number 1 ; gene_id "CCDC6--PRKG1^CCDC6^ENSG00000108091.11" ; gene_name CCDC6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018284.3" ; havana_transcript "OTTHUMT00000048176.3" ; hgnc_id "HGNC:18782" ; level 2 ; orig_coord_info "chr10,59906122,59906424,-" ; protein_id "ENSP00000263102.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "CCDC6--PRKG1^ENST00000263102.7" ; transcript_name "CCDC6-201" ; transcript_support_level 1 ; transcript_type protein_coding
CCDC6--PRKG1 HAVANA mRNA 1001 16128 . + . FI_gene_label "CCDC6^ENSG00000108091.11" ; ID "CCDC6--PRKG1^ENST00000263102.7" ; Parent "CCDC6--PRKG1^CCDC6^ENSG00000108091.11" ; ccdsid "CCDS7257.1" ; exon_id "ENSE00001950758.3" ; exon_number 1 ; gene_id "CCDC6--PRKG1^CCDC6^ENSG00000108091.11" ; gene_name CCDC6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018284.3" ; havana_transcript "OTTHUMT00000048176.3" ; hgnc_id "HGNC:18782" ; level 2 ; orig_coord_info "chr10,59906122,59906424,-" ; protein_id "ENSP00000263102.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "CCDC6--PRKG1^ENST00000263102.7" ; transcript_name "CCDC6-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
CCDC6--PRKG1 HAVANA gene 21152 34510 . + . FI_gene_label "PRKG1^ENSG00000185532.20" ; ID "CCDC6--PRKG1^PRKG1^ENSG00000185532.20" ; exon_id "ENSE00003828625.1" ; exon_number 1 ; gene_id "CCDC6--PRKG1^PRKG1^ENSG00000185532.20" ; gene_name PRKG1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018248.15" ; havana_transcript "OTTHUMT00000494523.1" ; hgnc_id "HGNC:9414" ; level 2 ; orig_coord_info "chr10,51074591,51074901,+" ; protein_id "ENSP00000363087.4" ; tag dotter_confirmed basic ; transcript_id "CCDC6--PRKG1^ENST00000373976.9" ; transcript_name "PRKG1-202" ; transcript_support_level 3 ; transcript_type protein_coding
CCDC6--PRKG1 HAVANA mRNA 21152 34510 . + . FI_gene_label "PRKG1^ENSG00000185532.20" ; ID "CCDC6--PRKG1^ENST00000373976.9" ; Parent "CCDC6--PRKG1^PRKG1^ENSG00000185532.20" ; exon_id "ENSE00003828625.1" ; exon_number 1 ; gene_id "CCDC6--PRKG1^PRKG1^ENSG00000185532.20" ; gene_name PRKG1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018248.15" ; havana_transcript "OTTHUMT00000494523.1" ; hgnc_id "HGNC:9414" ; level 2 ; orig_coord_info "chr10,51074591,51074901,+" ; protein_id "ENSP00000363087.4" ; tag dotter_confirmed basic ; transcript_id "CCDC6--PRKG1^ENST00000373976.9" ; transcript_name "PRKG1-202" ; transcript_support_level 3 ; transcript_type protein_coding
L1 and L2 created:
CLINT1--FSTL4 HAVANA gene 20914 45747 . + . FI_gene_label "FSTL4^ENSG00000053108.17" ; ID "CLINT1--FSTL4^FSTL4^ENSG00000053108.17" ; ccdsid "CCDS34238.1" ; exon_id "ENSE00002215577.1" ; exon_number 2 ; gene_id "CLINT1--FSTL4^FSTL4^ENSG00000053108.17" ; gene_name FSTL4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162729.4" ; havana_transcript "OTTHUMT00000370212.3" ; hgnc_id "HGNC:21389" ; level 2 ; orig_coord_info "chr5,133603858,133603983,-" ; protein_id "ENSP00000265342.7" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "CLINT1--FSTL4^ENST00000265342.12" ; transcript_name "FSTL4-201" ; transcript_support_level 5 ; transcript_type protein_coding
CLINT1--FSTL4 HAVANA mRNA 20914 45747 . + . FI_gene_label "FSTL4^ENSG00000053108.17" ; ID "CLINT1--FSTL4^ENST00000265342.12" ; Parent "CLINT1--FSTL4^FSTL4^ENSG00000053108.17" ; ccdsid "CCDS34238.1" ; exon_id "ENSE00002215577.1" ; exon_number 2 ; gene_id "CLINT1--FSTL4^FSTL4^ENSG00000053108.17" ; gene_name FSTL4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162729.4" ; havana_transcript "OTTHUMT00000370212.3" ; hgnc_id "HGNC:21389" ; level 2 ; orig_coord_info "chr5,133603858,133603983,-" ; protein_id "ENSP00000265342.7" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "CLINT1--FSTL4^ENST00000265342.12" ; transcript_name "FSTL4-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
CLINT1--FSTL4 HAVANA gene 1001 17909 . + . FI_gene_label "CLINT1^ENSG00000113282.14" ; ID "CLINT1--FSTL4^CLINT1^ENSG00000113282.14" ; ccdsid "CCDS47330.1" ; exon_id "ENSE00002101605.2" ; exon_number 1 ; gene_id "CLINT1--FSTL4^CLINT1^ENSG00000113282.14" ; gene_name CLINT1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163527.3" ; havana_transcript "OTTHUMT00000374001.1" ; hgnc_id "HGNC:23186" ; level 2 ; orig_coord_info "chr5,157858930,157858970,-" ; protein_id "ENSP00000388340.2" ; tag basic MANE_Select appris_alternative_1 CCDS ; transcript_id "CLINT1--FSTL4^ENST00000411809.7" ; transcript_name "CLINT1-201" ; transcript_support_level 1 ; transcript_type protein_coding
CLINT1--FSTL4 HAVANA mRNA 1001 17909 . + . FI_gene_label "CLINT1^ENSG00000113282.14" ; ID "CLINT1--FSTL4^ENST00000411809.7" ; Parent "CLINT1--FSTL4^CLINT1^ENSG00000113282.14" ; ccdsid "CCDS47330.1" ; exon_id "ENSE00002101605.2" ; exon_number 1 ; gene_id "CLINT1--FSTL4^CLINT1^ENSG00000113282.14" ; gene_name CLINT1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163527.3" ; havana_transcript "OTTHUMT00000374001.1" ; hgnc_id "HGNC:23186" ; level 2 ; orig_coord_info "chr5,157858930,157858970,-" ; protein_id "ENSP00000388340.2" ; tag basic MANE_Select appris_alternative_1 CCDS ; transcript_id "CLINT1--FSTL4^ENST00000411809.7" ; transcript_name "CLINT1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
CUEDC1--AC005670.3 HAVANA gene 2189 15546 . + . FI_gene_label "CUEDC1^ENSG00000180891.13" ; ID "CUEDC1--AC005670.3^CUEDC1^ENSG00000180891.13" ; ccdsid "CCDS11599.1" ; exon_id "ENSE00001219884.3" ; exon_number 2 ; gene_id "CUEDC1--AC005670.3^CUEDC1^ENSG00000180891.13" ; gene_name CUEDC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178775.4" ; havana_transcript "OTTHUMT00000443315.1" ; hgnc_id "HGNC:31350" ; level 2 ; orig_coord_info "chr17,57885229,57885564,-" ; protein_id "ENSP00000353373.2" ; tag alternative_5_UTR basic appris_principal_1 CCDS ; transcript_id "CUEDC1--AC005670.3^ENST00000360238.6" ; transcript_name "CUEDC1-201" ; transcript_support_level 2 ; transcript_type protein_coding
CUEDC1--AC005670.3 HAVANA mRNA 2189 15546 . + . FI_gene_label "CUEDC1^ENSG00000180891.13" ; ID "CUEDC1--AC005670.3^ENST00000360238.6" ; Parent "CUEDC1--AC005670.3^CUEDC1^ENSG00000180891.13" ; ccdsid "CCDS11599.1" ; exon_id "ENSE00001219884.3" ; exon_number 2 ; gene_id "CUEDC1--AC005670.3^CUEDC1^ENSG00000180891.13" ; gene_name CUEDC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178775.4" ; havana_transcript "OTTHUMT00000443315.1" ; hgnc_id "HGNC:31350" ; level 2 ; orig_coord_info "chr17,57885229,57885564,-" ; protein_id "ENSP00000353373.2" ; tag alternative_5_UTR basic appris_principal_1 CCDS ; transcript_id "CUEDC1--AC005670.3^ENST00000360238.6" ; transcript_name "CUEDC1-201" ; transcript_support_level 2 ; transcript_type protein_coding
L1 and L2 created:
DIDO1--LAMA5 HAVANA gene 29054 66553 . + . FI_gene_label "LAMA5^ENSG00000130702.15" ; ID "DIDO1--LAMA5^LAMA5^ENSG00000130702.15" ; ccdsid "CCDS33502.1" ; exon_id "ENSE00001622903.1" ; exon_number 1 ; gene_id "DIDO1--LAMA5^LAMA5^ENSG00000130702.15" ; gene_name LAMA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000032908.6" ; havana_transcript "OTTHUMT00000080014.3" ; hgnc_id "HGNC:6485" ; level 2 ; orig_coord_info "chr20,62366949,62367245,-" ; protein_id "ENSP00000252999.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "DIDO1--LAMA5^ENST00000252999.7" ; transcript_name "LAMA5-201" ; transcript_support_level 1 ; transcript_type protein_coding
DIDO1--LAMA5 HAVANA mRNA 29054 66553 . + . FI_gene_label "LAMA5^ENSG00000130702.15" ; ID "DIDO1--LAMA5^ENST00000252999.7" ; Parent "DIDO1--LAMA5^LAMA5^ENSG00000130702.15" ; ccdsid "CCDS33502.1" ; exon_id "ENSE00001622903.1" ; exon_number 1 ; gene_id "DIDO1--LAMA5^LAMA5^ENSG00000130702.15" ; gene_name LAMA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000032908.6" ; havana_transcript "OTTHUMT00000080014.3" ; hgnc_id "HGNC:6485" ; level 2 ; orig_coord_info "chr20,62366949,62367245,-" ; protein_id "ENSP00000252999.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "DIDO1--LAMA5^ENST00000252999.7" ; transcript_name "LAMA5-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
DIDO1--LAMA5 ENSEMBL gene 1001 26053 . + . FI_gene_label "DIDO1^ENSG00000101191.17" ; ID "DIDO1--LAMA5^DIDO1^ENSG00000101191.17" ; ccdsid "CCDS33506.1" ; exon_id "ENSE00001337044.1" ; exon_number 3 ; gene_id "DIDO1--LAMA5^DIDO1^ENSG00000101191.17" ; gene_name DIDO1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000032945.4" ; hgnc_id "HGNC:2680" ; level 3 ; orig_coord_info "chr20,62910774,62911612,-" ; protein_id "ENSP00000266070.4" ; tag basic appris_principal_2 CCDS ; transcript_id "DIDO1--LAMA5^ENST00000266070.8" ; transcript_name "DIDO1-201" ; transcript_support_level 5 ; transcript_type protein_coding
DIDO1--LAMA5 ENSEMBL mRNA 1001 26053 . + . FI_gene_label "DIDO1^ENSG00000101191.17" ; ID "DIDO1--LAMA5^ENST00000266070.8" ; Parent "DIDO1--LAMA5^DIDO1^ENSG00000101191.17" ; ccdsid "CCDS33506.1" ; exon_id "ENSE00001337044.1" ; exon_number 3 ; gene_id "DIDO1--LAMA5^DIDO1^ENSG00000101191.17" ; gene_name DIDO1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000032945.4" ; hgnc_id "HGNC:2680" ; level 3 ; orig_coord_info "chr20,62910774,62911612,-" ; protein_id "ENSP00000266070.4" ; tag basic appris_principal_2 CCDS ; transcript_id "DIDO1--LAMA5^ENST00000266070.8" ; transcript_name "DIDO1-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
ERBB2--MED1 HAVANA gene 5981 25761 . + . FI_gene_label "ERBB2^ENSG00000141736.14" ; ID "ERBB2--MED1^ERBB2^ENSG00000141736.14" ; ccdsid "CCDS32642.1" ; exon_id "ENSE00003909903.1" ; exon_number 1 ; gene_id "ERBB2--MED1^ERBB2^ENSG00000141736.14" ; gene_name ERBB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179300.3" ; havana_transcript "OTTHUMT00000445621.2" ; hgnc_id "HGNC:3430" ; level 2 ; orig_coord_info "chr17,39700239,39700311,+" ; protein_id "ENSP00000269571.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "ERBB2--MED1^ENST00000269571.10" ; transcript_name "ERBB2-201" ; transcript_support_level 1 ; transcript_type protein_coding
ERBB2--MED1 HAVANA mRNA 5981 25761 . + . FI_gene_label "ERBB2^ENSG00000141736.14" ; ID "ERBB2--MED1^ENST00000269571.10" ; Parent "ERBB2--MED1^ERBB2^ENSG00000141736.14" ; ccdsid "CCDS32642.1" ; exon_id "ENSE00003909903.1" ; exon_number 1 ; gene_id "ERBB2--MED1^ERBB2^ENSG00000141736.14" ; gene_name ERBB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179300.3" ; havana_transcript "OTTHUMT00000445621.2" ; hgnc_id "HGNC:3430" ; level 2 ; orig_coord_info "chr17,39700239,39700311,+" ; protein_id "ENSP00000269571.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "ERBB2--MED1^ENST00000269571.10" ; transcript_name "ERBB2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ERBB2--MED1 HAVANA gene 30179 52754 . + . FI_gene_label "MED1^ENSG00000125686.12" ; ID "ERBB2--MED1^MED1^ENSG00000125686.12" ; ccdsid "CCDS11336.1" ; exon_id "ENSE00002724355.2" ; exon_number 1 ; gene_id "ERBB2--MED1^MED1^ENSG00000125686.12" ; gene_name MED1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000133216.4" ; havana_transcript "OTTHUMT00000256943.4" ; hgnc_id "HGNC:9234" ; level 2 ; orig_coord_info "chr17,39451038,39451062,-" ; protein_id "ENSP00000300651.6" ; tag basic MANE_Select appris_principal_2 CCDS ; transcript_id "ERBB2--MED1^ENST00000300651.11" ; transcript_name "MED1-201" ; transcript_support_level 1 ; transcript_type protein_coding
ERBB2--MED1 HAVANA mRNA 30179 52754 . + . FI_gene_label "MED1^ENSG00000125686.12" ; ID "ERBB2--MED1^ENST00000300651.11" ; Parent "ERBB2--MED1^MED1^ENSG00000125686.12" ; ccdsid "CCDS11336.1" ; exon_id "ENSE00002724355.2" ; exon_number 1 ; gene_id "ERBB2--MED1^MED1^ENSG00000125686.12" ; gene_name MED1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000133216.4" ; havana_transcript "OTTHUMT00000256943.4" ; hgnc_id "HGNC:9234" ; level 2 ; orig_coord_info "chr17,39451038,39451062,-" ; protein_id "ENSP00000300651.6" ; tag basic MANE_Select appris_principal_2 CCDS ; transcript_id "ERBB2--MED1^ENST00000300651.11" ; transcript_name "MED1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
F11R--AL590408.1 HAVANA gene 1192 9551 . + . FI_gene_label "F11R^ENSG00000158769.18" ; ID "F11R--AL590408.1^F11R^ENSG00000158769.18" ; ccdsid "CCDS1213.1" ; exon_id "ENSE00003306692.2" ; exon_number 1 ; gene_id "F11R--AL590408.1^F11R^ENSG00000158769.18" ; gene_name F11R ; gene_type protein_coding ; havana_gene "OTTHUMG00000028602.4" ; havana_transcript "OTTHUMT00000071458.4" ; hgnc_id "HGNC:14685" ; level 2 ; orig_coord_info "chr1,161021010,161021073,-" ; protein_id "ENSP00000357005.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "F11R--AL590408.1^ENST00000368026.11" ; transcript_name "F11R-202" ; transcript_support_level 1 ; transcript_type protein_coding
F11R--AL590408.1 HAVANA mRNA 1192 9551 . + . FI_gene_label "F11R^ENSG00000158769.18" ; ID "F11R--AL590408.1^ENST00000368026.11" ; Parent "F11R--AL590408.1^F11R^ENSG00000158769.18" ; ccdsid "CCDS1213.1" ; exon_id "ENSE00003306692.2" ; exon_number 1 ; gene_id "F11R--AL590408.1^F11R^ENSG00000158769.18" ; gene_name F11R ; gene_type protein_coding ; havana_gene "OTTHUMG00000028602.4" ; havana_transcript "OTTHUMT00000071458.4" ; hgnc_id "HGNC:14685" ; level 2 ; orig_coord_info "chr1,161021010,161021073,-" ; protein_id "ENSP00000357005.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "F11R--AL590408.1^ENST00000368026.11" ; transcript_name "F11R-202" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
F11R--NOS1AP HAVANA gene 12552 30524 . + . FI_gene_label "NOS1AP^ENSG00000198929.13" ; ID "F11R--NOS1AP^NOS1AP^ENSG00000198929.13" ; ccdsid "CCDS1237.1" ; exon_id "ENSE00001445962.4" ; exon_number 1 ; gene_id "F11R--NOS1AP^NOS1AP^ENSG00000198929.13" ; gene_name NOS1AP ; gene_type protein_coding ; havana_gene "OTTHUMG00000024049.7" ; havana_transcript "OTTHUMT00000060555.3" ; hgnc_id "HGNC:16859" ; level 2 ; orig_coord_info "chr1,162070178,162070282,+" ; protein_id "ENSP00000355133.5" ; tag basic MANE_Select CCDS ; transcript_id "F11R--NOS1AP^ENST00000361897.10" ; transcript_name "NOS1AP-201" ; transcript_support_level 1 ; transcript_type protein_coding
F11R--NOS1AP HAVANA mRNA 12552 30524 . + . FI_gene_label "NOS1AP^ENSG00000198929.13" ; ID "F11R--NOS1AP^ENST00000361897.10" ; Parent "F11R--NOS1AP^NOS1AP^ENSG00000198929.13" ; ccdsid "CCDS1237.1" ; exon_id "ENSE00001445962.4" ; exon_number 1 ; gene_id "F11R--NOS1AP^NOS1AP^ENSG00000198929.13" ; gene_name NOS1AP ; gene_type protein_coding ; havana_gene "OTTHUMG00000024049.7" ; havana_transcript "OTTHUMT00000060555.3" ; hgnc_id "HGNC:16859" ; level 2 ; orig_coord_info "chr1,162070178,162070282,+" ; protein_id "ENSP00000355133.5" ; tag basic MANE_Select CCDS ; transcript_id "F11R--NOS1AP^ENST00000361897.10" ; transcript_name "NOS1AP-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
F11R--NOS1AP HAVANA gene 1192 9551 . + . FI_gene_label "F11R^ENSG00000158769.18" ; ID "F11R--NOS1AP^F11R^ENSG00000158769.18" ; ccdsid "CCDS1213.1" ; exon_id "ENSE00003306692.2" ; exon_number 1 ; gene_id "F11R--NOS1AP^F11R^ENSG00000158769.18" ; gene_name F11R ; gene_type protein_coding ; havana_gene "OTTHUMG00000028602.4" ; havana_transcript "OTTHUMT00000071458.4" ; hgnc_id "HGNC:14685" ; level 2 ; orig_coord_info "chr1,161021010,161021073,-" ; protein_id "ENSP00000357005.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "F11R--NOS1AP^ENST00000368026.11" ; transcript_name "F11R-202" ; transcript_support_level 1 ; transcript_type protein_coding
F11R--NOS1AP HAVANA mRNA 1192 9551 . + . FI_gene_label "F11R^ENSG00000158769.18" ; ID "F11R--NOS1AP^ENST00000368026.11" ; Parent "F11R--NOS1AP^F11R^ENSG00000158769.18" ; ccdsid "CCDS1213.1" ; exon_id "ENSE00003306692.2" ; exon_number 1 ; gene_id "F11R--NOS1AP^F11R^ENSG00000158769.18" ; gene_name F11R ; gene_type protein_coding ; havana_gene "OTTHUMG00000028602.4" ; havana_transcript "OTTHUMT00000071458.4" ; hgnc_id "HGNC:14685" ; level 2 ; orig_coord_info "chr1,161021010,161021073,-" ; protein_id "ENSP00000357005.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "F11R--NOS1AP^ENST00000368026.11" ; transcript_name "F11R-202" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
FBXL20--AC005914.1 HAVANA gene 1898 26528 . + . FI_gene_label "FBXL20^ENSG00000108306.13" ; ID "FBXL20--AC005914.1^FBXL20^ENSG00000108306.13" ; ccdsid "CCDS32640.1" ; exon_id "ENSE00002727680.2" ; exon_number 1 ; gene_id "FBXL20--AC005914.1^FBXL20^ENSG00000108306.13" ; gene_name FBXL20 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179002.9" ; havana_transcript "OTTHUMT00000444315.4" ; hgnc_id "HGNC:24679" ; level 2 ; orig_coord_info "chr17,39401361,39401402,-" ; protein_id "ENSP00000264658.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FBXL20--AC005914.1^ENST00000264658.11" ; transcript_name "FBXL20-201" ; transcript_support_level 1 ; transcript_type protein_coding
FBXL20--AC005914.1 HAVANA mRNA 1898 26528 . + . FI_gene_label "FBXL20^ENSG00000108306.13" ; ID "FBXL20--AC005914.1^ENST00000264658.11" ; Parent "FBXL20--AC005914.1^FBXL20^ENSG00000108306.13" ; ccdsid "CCDS32640.1" ; exon_id "ENSE00002727680.2" ; exon_number 1 ; gene_id "FBXL20--AC005914.1^FBXL20^ENSG00000108306.13" ; gene_name FBXL20 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179002.9" ; havana_transcript "OTTHUMT00000444315.4" ; hgnc_id "HGNC:24679" ; level 2 ; orig_coord_info "chr17,39401361,39401402,-" ; protein_id "ENSP00000264658.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FBXL20--AC005914.1^ENST00000264658.11" ; transcript_name "FBXL20-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
FBXL20--AC091132.2 HAVANA gene 1898 26528 . + . FI_gene_label "FBXL20^ENSG00000108306.13" ; ID "FBXL20--AC091132.2^FBXL20^ENSG00000108306.13" ; ccdsid "CCDS32640.1" ; exon_id "ENSE00002727680.2" ; exon_number 1 ; gene_id "FBXL20--AC091132.2^FBXL20^ENSG00000108306.13" ; gene_name FBXL20 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179002.9" ; havana_transcript "OTTHUMT00000444315.4" ; hgnc_id "HGNC:24679" ; level 2 ; orig_coord_info "chr17,39401361,39401402,-" ; protein_id "ENSP00000264658.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FBXL20--AC091132.2^ENST00000264658.11" ; transcript_name "FBXL20-201" ; transcript_support_level 1 ; transcript_type protein_coding
FBXL20--AC091132.2 HAVANA mRNA 1898 26528 . + . FI_gene_label "FBXL20^ENSG00000108306.13" ; ID "FBXL20--AC091132.2^ENST00000264658.11" ; Parent "FBXL20--AC091132.2^FBXL20^ENSG00000108306.13" ; ccdsid "CCDS32640.1" ; exon_id "ENSE00002727680.2" ; exon_number 1 ; gene_id "FBXL20--AC091132.2^FBXL20^ENSG00000108306.13" ; gene_name FBXL20 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179002.9" ; havana_transcript "OTTHUMT00000444315.4" ; hgnc_id "HGNC:24679" ; level 2 ; orig_coord_info "chr17,39401361,39401402,-" ; protein_id "ENSP00000264658.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FBXL20--AC091132.2^ENST00000264658.11" ; transcript_name "FBXL20-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
FBXL20--MRPS23 HAVANA gene 1898 26528 . + . FI_gene_label "FBXL20^ENSG00000108306.13" ; ID "FBXL20--MRPS23^FBXL20^ENSG00000108306.13" ; ccdsid "CCDS32640.1" ; exon_id "ENSE00002727680.2" ; exon_number 1 ; gene_id "FBXL20--MRPS23^FBXL20^ENSG00000108306.13" ; gene_name FBXL20 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179002.9" ; havana_transcript "OTTHUMT00000444315.4" ; hgnc_id "HGNC:24679" ; level 2 ; orig_coord_info "chr17,39401361,39401402,-" ; protein_id "ENSP00000264658.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FBXL20--MRPS23^ENST00000264658.11" ; transcript_name "FBXL20-201" ; transcript_support_level 1 ; transcript_type protein_coding
FBXL20--MRPS23 HAVANA mRNA 1898 26528 . + . FI_gene_label "FBXL20^ENSG00000108306.13" ; ID "FBXL20--MRPS23^ENST00000264658.11" ; Parent "FBXL20--MRPS23^FBXL20^ENSG00000108306.13" ; ccdsid "CCDS32640.1" ; exon_id "ENSE00002727680.2" ; exon_number 1 ; gene_id "FBXL20--MRPS23^FBXL20^ENSG00000108306.13" ; gene_name FBXL20 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179002.9" ; havana_transcript "OTTHUMT00000444315.4" ; hgnc_id "HGNC:24679" ; level 2 ; orig_coord_info "chr17,39401361,39401402,-" ; protein_id "ENSP00000264658.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FBXL20--MRPS23^ENST00000264658.11" ; transcript_name "FBXL20-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
FBXL20--MRPS23 HAVANA gene 29541 38329 . + . FI_gene_label "MRPS23^ENSG00000181610.13" ; ID "FBXL20--MRPS23^MRPS23^ENSG00000181610.13" ; ccdsid "CCDS11598.1" ; exon_id "ENSE00001232406.7" ; exon_number 1 ; gene_id "FBXL20--MRPS23^MRPS23^ENSG00000181610.13" ; gene_name MRPS23 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178774.4" ; havana_transcript "OTTHUMT00000443301.3" ; hgnc_id "HGNC:14509" ; level 2 ; orig_coord_info "chr17,57849967,57850010,-" ; protein_id "ENSP00000320184.8" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FBXL20--MRPS23^ENST00000313608.13" ; transcript_name "MRPS23-201" ; transcript_support_level 1 ; transcript_type protein_coding
FBXL20--MRPS23 HAVANA mRNA 29541 38329 . + . FI_gene_label "MRPS23^ENSG00000181610.13" ; ID "FBXL20--MRPS23^ENST00000313608.13" ; Parent "FBXL20--MRPS23^MRPS23^ENSG00000181610.13" ; ccdsid "CCDS11598.1" ; exon_id "ENSE00001232406.7" ; exon_number 1 ; gene_id "FBXL20--MRPS23^MRPS23^ENSG00000181610.13" ; gene_name MRPS23 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178774.4" ; havana_transcript "OTTHUMT00000443301.3" ; hgnc_id "HGNC:14509" ; level 2 ; orig_coord_info "chr17,57849967,57850010,-" ; protein_id "ENSP00000320184.8" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FBXL20--MRPS23^ENST00000313608.13" ; transcript_name "MRPS23-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
FBXL20--UPRT HAVANA gene 1898 26528 . + . FI_gene_label "FBXL20^ENSG00000108306.13" ; ID "FBXL20--UPRT^FBXL20^ENSG00000108306.13" ; ccdsid "CCDS32640.1" ; exon_id "ENSE00002727680.2" ; exon_number 1 ; gene_id "FBXL20--UPRT^FBXL20^ENSG00000108306.13" ; gene_name FBXL20 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179002.9" ; havana_transcript "OTTHUMT00000444315.4" ; hgnc_id "HGNC:24679" ; level 2 ; orig_coord_info "chr17,39401361,39401402,-" ; protein_id "ENSP00000264658.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FBXL20--UPRT^ENST00000264658.11" ; transcript_name "FBXL20-201" ; transcript_support_level 1 ; transcript_type protein_coding
FBXL20--UPRT HAVANA mRNA 1898 26528 . + . FI_gene_label "FBXL20^ENSG00000108306.13" ; ID "FBXL20--UPRT^ENST00000264658.11" ; Parent "FBXL20--UPRT^FBXL20^ENSG00000108306.13" ; ccdsid "CCDS32640.1" ; exon_id "ENSE00002727680.2" ; exon_number 1 ; gene_id "FBXL20--UPRT^FBXL20^ENSG00000108306.13" ; gene_name FBXL20 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179002.9" ; havana_transcript "OTTHUMT00000444315.4" ; hgnc_id "HGNC:24679" ; level 2 ; orig_coord_info "chr17,39401361,39401402,-" ; protein_id "ENSP00000264658.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FBXL20--UPRT^ENST00000264658.11" ; transcript_name "FBXL20-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
FBXL20--UPRT HAVANA gene 34024 38513 . + . FI_gene_label "UPRT^ENSG00000094841.14" ; ID "FBXL20--UPRT^UPRT^ENSG00000094841.14" ; exon_id "ENSE00002182124.1" ; exon_number 1 ; gene_id "FBXL20--UPRT^UPRT^ENSG00000094841.14" ; gene_name UPRT ; gene_type protein_coding ; havana_gene "OTTHUMG00000021864.9" ; havana_transcript "OTTHUMT00000390870.1" ; hgnc_id "HGNC:28334" ; level 2 ; orig_coord_info "chrX,75274255,75274640,+" ; protein_id "ENSP00000362471.4" ; transcript_id "FBXL20--UPRT^ENST00000373373.8" ; transcript_name "UPRT-201" ; transcript_support_level 3 ; transcript_type nonsense_mediated_decay
FBXL20--UPRT HAVANA mRNA 34024 38513 . + . FI_gene_label "UPRT^ENSG00000094841.14" ; ID "FBXL20--UPRT^ENST00000373373.8" ; Parent "FBXL20--UPRT^UPRT^ENSG00000094841.14" ; exon_id "ENSE00002182124.1" ; exon_number 1 ; gene_id "FBXL20--UPRT^UPRT^ENSG00000094841.14" ; gene_name UPRT ; gene_type protein_coding ; havana_gene "OTTHUMG00000021864.9" ; havana_transcript "OTTHUMT00000390870.1" ; hgnc_id "HGNC:28334" ; level 2 ; orig_coord_info "chrX,75274255,75274640,+" ; protein_id "ENSP00000362471.4" ; transcript_id "FBXL20--UPRT^ENST00000373373.8" ; transcript_name "UPRT-201" ; transcript_support_level 3 ; transcript_type nonsense_mediated_decay
L1 and L2 created:
FGFR2--ABLIM1 HAVANA gene 39223 72488 . + . FI_gene_label "ABLIM1^ENSG00000099204.20" ; ID "FGFR2--ABLIM1^ABLIM1^ENSG00000099204.20" ; ccdsid "CCDS7590.1" ; exon_id "ENSE00001647651.2" ; exon_number 1 ; gene_id "FGFR2--ABLIM1^ABLIM1^ENSG00000099204.20" ; gene_name ABLIM1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000019088.9" ; havana_transcript "OTTHUMT00000050469.3" ; hgnc_id "HGNC:78" ; level 2 ; orig_coord_info "chr10,114657957,114658200,-" ; protein_id "ENSP00000277895.5" ; tag basic appris_alternative_2 CCDS ; transcript_id "FGFR2--ABLIM1^ENST00000277895.9" ; transcript_name "ABLIM1-201" ; transcript_support_level 5 ; transcript_type protein_coding
FGFR2--ABLIM1 HAVANA mRNA 39223 72488 . + . FI_gene_label "ABLIM1^ENSG00000099204.20" ; ID "FGFR2--ABLIM1^ENST00000277895.9" ; Parent "FGFR2--ABLIM1^ABLIM1^ENSG00000099204.20" ; ccdsid "CCDS7590.1" ; exon_id "ENSE00001647651.2" ; exon_number 1 ; gene_id "FGFR2--ABLIM1^ABLIM1^ENSG00000099204.20" ; gene_name ABLIM1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000019088.9" ; havana_transcript "OTTHUMT00000050469.3" ; hgnc_id "HGNC:78" ; level 2 ; orig_coord_info "chr10,114657957,114658200,-" ; protein_id "ENSP00000277895.5" ; tag basic appris_alternative_2 CCDS ; transcript_id "FGFR2--ABLIM1^ENST00000277895.9" ; transcript_name "ABLIM1-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
FGFR2--ABLIM1 HAVANA gene 1063 28990 . + . FI_gene_label "FGFR2^ENSG00000066468.23" ; ID "FGFR2--ABLIM1^FGFR2^ENSG00000066468.23" ; exon_id "ENSE00003567716.1" ; exon_number 2 ; gene_id "FGFR2--ABLIM1^FGFR2^ENSG00000066468.23" ; gene_name FGFR2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000019175.12" ; havana_transcript "OTTHUMT00000050717.2" ; hgnc_id "HGNC:3689" ; level 2 ; orig_coord_info "chr10,121593709,121593817,-" ; protein_id "ENSP00000337665.6" ; tag mRNA_end_NF cds_end_NF ; transcript_id "FGFR2--ABLIM1^ENST00000336553.10" ; transcript_name "FGFR2-201" ; transcript_support_level 5 ; transcript_type protein_coding
FGFR2--ABLIM1 HAVANA mRNA 1063 28990 . + . FI_gene_label "FGFR2^ENSG00000066468.23" ; ID "FGFR2--ABLIM1^ENST00000336553.10" ; Parent "FGFR2--ABLIM1^FGFR2^ENSG00000066468.23" ; exon_id "ENSE00003567716.1" ; exon_number 2 ; gene_id "FGFR2--ABLIM1^FGFR2^ENSG00000066468.23" ; gene_name FGFR2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000019175.12" ; havana_transcript "OTTHUMT00000050717.2" ; hgnc_id "HGNC:3689" ; level 2 ; orig_coord_info "chr10,121593709,121593817,-" ; protein_id "ENSP00000337665.6" ; tag mRNA_end_NF cds_end_NF ; transcript_id "FGFR2--ABLIM1^ENST00000336553.10" ; transcript_name "FGFR2-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
FSIP1--AC013652.1 HAVANA gene 1001 15962 . + . FI_gene_label "FSIP1^ENSG00000150667.8" ; ID "FSIP1--AC013652.1^FSIP1^ENSG00000150667.8" ; ccdsid "CCDS10050.1" ; exon_id "ENSE00003574039.1" ; exon_number 2 ; gene_id "FSIP1--AC013652.1^FSIP1^ENSG00000150667.8" ; gene_name FSIP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000172456.3" ; havana_transcript "OTTHUMT00000252118.4" ; hgnc_id "HGNC:21674" ; level 2 ; orig_coord_info "chr15,39776399,39776524,-" ; protein_id "ENSP00000280236.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FSIP1--AC013652.1^ENST00000350221.4" ; transcript_name "FSIP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
FSIP1--AC013652.1 HAVANA mRNA 1001 15962 . + . FI_gene_label "FSIP1^ENSG00000150667.8" ; ID "FSIP1--AC013652.1^ENST00000350221.4" ; Parent "FSIP1--AC013652.1^FSIP1^ENSG00000150667.8" ; ccdsid "CCDS10050.1" ; exon_id "ENSE00003574039.1" ; exon_number 2 ; gene_id "FSIP1--AC013652.1^FSIP1^ENSG00000150667.8" ; gene_name FSIP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000172456.3" ; havana_transcript "OTTHUMT00000252118.4" ; hgnc_id "HGNC:21674" ; level 2 ; orig_coord_info "chr15,39776399,39776524,-" ; protein_id "ENSP00000280236.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FSIP1--AC013652.1^ENST00000350221.4" ; transcript_name "FSIP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
FSIP1--GPR176 HAVANA gene 21876 32803 . + . FI_gene_label "GPR176^ENSG00000166073.11" ; ID "FSIP1--GPR176^GPR176^ENSG00000166073.11" ; ccdsid "CCDS61589.1" ; exon_id "ENSE00002560616.1" ; exon_number 1 ; gene_id "FSIP1--GPR176^GPR176^ENSG00000166073.11" ; gene_name GPR176 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129873.5" ; havana_transcript "OTTHUMT00000418451.1" ; hgnc_id "HGNC:32370" ; level 2 ; orig_coord_info "chr15,39919855,39920026,-" ; protein_id "ENSP00000299092.3" ; tag dotter_confirmed basic CCDS ; transcript_id "FSIP1--GPR176^ENST00000299092.3" ; transcript_name "GPR176-201" ; transcript_support_level 1 ; transcript_type protein_coding
FSIP1--GPR176 HAVANA mRNA 21876 32803 . + . FI_gene_label "GPR176^ENSG00000166073.11" ; ID "FSIP1--GPR176^ENST00000299092.3" ; Parent "FSIP1--GPR176^GPR176^ENSG00000166073.11" ; ccdsid "CCDS61589.1" ; exon_id "ENSE00002560616.1" ; exon_number 1 ; gene_id "FSIP1--GPR176^GPR176^ENSG00000166073.11" ; gene_name GPR176 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129873.5" ; havana_transcript "OTTHUMT00000418451.1" ; hgnc_id "HGNC:32370" ; level 2 ; orig_coord_info "chr15,39919855,39920026,-" ; protein_id "ENSP00000299092.3" ; tag dotter_confirmed basic CCDS ; transcript_id "FSIP1--GPR176^ENST00000299092.3" ; transcript_name "GPR176-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
FSIP1--GPR176 HAVANA gene 1001 15962 . + . FI_gene_label "FSIP1^ENSG00000150667.8" ; ID "FSIP1--GPR176^FSIP1^ENSG00000150667.8" ; ccdsid "CCDS10050.1" ; exon_id "ENSE00003574039.1" ; exon_number 2 ; gene_id "FSIP1--GPR176^FSIP1^ENSG00000150667.8" ; gene_name FSIP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000172456.3" ; havana_transcript "OTTHUMT00000252118.4" ; hgnc_id "HGNC:21674" ; level 2 ; orig_coord_info "chr15,39776399,39776524,-" ; protein_id "ENSP00000280236.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FSIP1--GPR176^ENST00000350221.4" ; transcript_name "FSIP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
FSIP1--GPR176 HAVANA mRNA 1001 15962 . + . FI_gene_label "FSIP1^ENSG00000150667.8" ; ID "FSIP1--GPR176^ENST00000350221.4" ; Parent "FSIP1--GPR176^FSIP1^ENSG00000150667.8" ; ccdsid "CCDS10050.1" ; exon_id "ENSE00003574039.1" ; exon_number 2 ; gene_id "FSIP1--GPR176^FSIP1^ENSG00000150667.8" ; gene_name FSIP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000172456.3" ; havana_transcript "OTTHUMT00000252118.4" ; hgnc_id "HGNC:21674" ; level 2 ; orig_coord_info "chr15,39776399,39776524,-" ; protein_id "ENSP00000280236.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FSIP1--GPR176^ENST00000350221.4" ; transcript_name "FSIP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
GBF1--HPSE2 HAVANA gene 1151 51828 . + . FI_gene_label "GBF1^ENSG00000107862.6" ; ID "GBF1--HPSE2^GBF1^ENSG00000107862.6" ; exon_id "ENSE00001451422.1" ; exon_number 2 ; gene_id "GBF1--HPSE2^GBF1^ENSG00000107862.6" ; gene_name GBF1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018955.2" ; hgnc_id "HGNC:4181" ; level 2 ; orig_coord_info "chr10,102258939,102259034,+" ; protein_id "ENSP00000359000.4" ; tag RNA_Seq_supported_only basic appris_principal_3 ; transcript_id "GBF1--HPSE2^ENST00000369983.4" ; transcript_name "GBF1-201" ; transcript_support_level 1 ; transcript_type protein_coding
GBF1--HPSE2 HAVANA mRNA 1151 51828 . + . FI_gene_label "GBF1^ENSG00000107862.6" ; ID "GBF1--HPSE2^ENST00000369983.4" ; Parent "GBF1--HPSE2^GBF1^ENSG00000107862.6" ; exon_id "ENSE00001451422.1" ; exon_number 2 ; gene_id "GBF1--HPSE2^GBF1^ENSG00000107862.6" ; gene_name GBF1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018955.2" ; hgnc_id "HGNC:4181" ; level 2 ; orig_coord_info "chr10,102258939,102259034,+" ; protein_id "ENSP00000359000.4" ; tag RNA_Seq_supported_only basic appris_principal_3 ; transcript_id "GBF1--HPSE2^ENST00000369983.4" ; transcript_name "GBF1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
GBF1--HPSE2 HAVANA gene 54906 68769 . + . FI_gene_label "HPSE2^ENSG00000172987.13" ; ID "GBF1--HPSE2^HPSE2^ENSG00000172987.13" ; ccdsid "CCDS53568.1" ; exon_id "ENSE00001320740.1" ; exon_number 1 ; gene_id "GBF1--HPSE2^HPSE2^ENSG00000172987.13" ; gene_name HPSE2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018880.3" ; havana_transcript "OTTHUMT00000049790.1" ; hgnc_id "HGNC:18374" ; level 2 ; orig_coord_info "chr10,99235513,99235802,-" ; protein_id "ENSP00000359577.1" ; tag basic CCDS ; transcript_id "GBF1--HPSE2^ENST00000370546.5" ; transcript_name "HPSE2-201" ; transcript_support_level 1 ; transcript_type protein_coding
GBF1--HPSE2 HAVANA mRNA 54906 68769 . + . FI_gene_label "HPSE2^ENSG00000172987.13" ; ID "GBF1--HPSE2^ENST00000370546.5" ; Parent "GBF1--HPSE2^HPSE2^ENSG00000172987.13" ; ccdsid "CCDS53568.1" ; exon_id "ENSE00001320740.1" ; exon_number 1 ; gene_id "GBF1--HPSE2^HPSE2^ENSG00000172987.13" ; gene_name HPSE2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018880.3" ; havana_transcript "OTTHUMT00000049790.1" ; hgnc_id "HGNC:18374" ; level 2 ; orig_coord_info "chr10,99235513,99235802,-" ; protein_id "ENSP00000359577.1" ; tag basic CCDS ; transcript_id "GBF1--HPSE2^ENST00000370546.5" ; transcript_name "HPSE2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
GMDS--EXOC2 HAVANA gene 22335 53884 . + . FI_gene_label "EXOC2^ENSG00000112685.14" ; ID "GMDS--EXOC2^EXOC2^ENSG00000112685.14" ; ccdsid "CCDS34327.1" ; exon_id "ENSE00000679928.3" ; exon_number 2 ; gene_id "GMDS--EXOC2^EXOC2^ENSG00000112685.14" ; gene_name EXOC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000137437.4" ; havana_transcript "OTTHUMT00000039627.2" ; hgnc_id "HGNC:24968" ; level 2 ; orig_coord_info "chr6,637701,637818,-" ; protein_id "ENSP00000230449.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "GMDS--EXOC2^ENST00000230449.9" ; transcript_name "EXOC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
GMDS--EXOC2 HAVANA mRNA 22335 53884 . + . FI_gene_label "EXOC2^ENSG00000112685.14" ; ID "GMDS--EXOC2^ENST00000230449.9" ; Parent "GMDS--EXOC2^EXOC2^ENSG00000112685.14" ; ccdsid "CCDS34327.1" ; exon_id "ENSE00000679928.3" ; exon_number 2 ; gene_id "GMDS--EXOC2^EXOC2^ENSG00000112685.14" ; gene_name EXOC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000137437.4" ; havana_transcript "OTTHUMT00000039627.2" ; hgnc_id "HGNC:24968" ; level 2 ; orig_coord_info "chr6,637701,637818,-" ; protein_id "ENSP00000230449.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "GMDS--EXOC2^ENST00000230449.9" ; transcript_name "EXOC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
GMDS--EXOC2 HAVANA gene 1001 19334 . + . FI_gene_label "GMDS^ENSG00000112699.11" ; ID "GMDS--EXOC2^GMDS^ENSG00000112699.11" ; ccdsid "CCDS4474.1" ; exon_id "ENSE00001486507.5" ; exon_number 1 ; gene_id "GMDS--EXOC2^GMDS^ENSG00000112699.11" ; gene_name GMDS ; gene_type protein_coding ; havana_gene "OTTHUMG00000016143.6" ; havana_transcript "OTTHUMT00000043380.4" ; hgnc_id "HGNC:4369" ; level 1 ; orig_coord_info "chr6,2245321,2245422,-" ; protein_id "ENSP00000370194.4" ; tag basic MANE_Select appris_principal_1 exp_conf CCDS ; transcript_id "GMDS--EXOC2^ENST00000380815.5" ; transcript_name "GMDS-202" ; transcript_support_level 1 ; transcript_type protein_coding
GMDS--EXOC2 HAVANA mRNA 1001 19334 . + . FI_gene_label "GMDS^ENSG00000112699.11" ; ID "GMDS--EXOC2^ENST00000380815.5" ; Parent "GMDS--EXOC2^GMDS^ENSG00000112699.11" ; ccdsid "CCDS4474.1" ; exon_id "ENSE00001486507.5" ; exon_number 1 ; gene_id "GMDS--EXOC2^GMDS^ENSG00000112699.11" ; gene_name GMDS ; gene_type protein_coding ; havana_gene "OTTHUMG00000016143.6" ; havana_transcript "OTTHUMT00000043380.4" ; hgnc_id "HGNC:4369" ; level 1 ; orig_coord_info "chr6,2245321,2245422,-" ; protein_id "ENSP00000370194.4" ; tag basic MANE_Select appris_principal_1 exp_conf CCDS ; transcript_id "GMDS--EXOC2^ENST00000380815.5" ; transcript_name "GMDS-202" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
GRB7--AC005670.3 HAVANA gene 1012 9289 . + . FI_gene_label "GRB7^ENSG00000141738.14" ; ID "GRB7--AC005670.3^GRB7^ENSG00000141738.14" ; ccdsid "CCDS11345.1" ; exon_id "ENSE00003687545.1" ; exon_number 2 ; gene_id "GRB7--AC005670.3^GRB7^ENSG00000141738.14" ; gene_name GRB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000133253.6" ; havana_transcript "OTTHUMT00000257024.3" ; hgnc_id "HGNC:4567" ; level 2 ; orig_coord_info "chr17,39742302,39742456,+" ; protein_id "ENSP00000310771.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "GRB7--AC005670.3^ENST00000309156.9" ; transcript_name "GRB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
GRB7--AC005670.3 HAVANA mRNA 1012 9289 . + . FI_gene_label "GRB7^ENSG00000141738.14" ; ID "GRB7--AC005670.3^ENST00000309156.9" ; Parent "GRB7--AC005670.3^GRB7^ENSG00000141738.14" ; ccdsid "CCDS11345.1" ; exon_id "ENSE00003687545.1" ; exon_number 2 ; gene_id "GRB7--AC005670.3^GRB7^ENSG00000141738.14" ; gene_name GRB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000133253.6" ; havana_transcript "OTTHUMT00000257024.3" ; hgnc_id "HGNC:4567" ; level 2 ; orig_coord_info "chr17,39742302,39742456,+" ; protein_id "ENSP00000310771.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "GRB7--AC005670.3^ENST00000309156.9" ; transcript_name "GRB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
IL27RA--RFX1 HAVANA gene 14462 32858 . + . FI_gene_label "RFX1^ENSG00000132005.9" ; ID "IL27RA--RFX1^RFX1^ENSG00000132005.9" ; ccdsid "CCDS12301.1" ; exon_id "ENSE00003553019.1" ; exon_number 2 ; gene_id "IL27RA--RFX1^RFX1^ENSG00000132005.9" ; gene_name RFX1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000181979.4" ; havana_transcript "OTTHUMT00000458510.2" ; hgnc_id "HGNC:9982" ; level 2 ; orig_coord_info "chr19,13993525,13993843,-" ; protein_id "ENSP00000254325.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "IL27RA--RFX1^ENST00000254325.9" ; transcript_name "RFX1-201" ; transcript_support_level 1 ; transcript_type protein_coding
IL27RA--RFX1 HAVANA mRNA 14462 32858 . + . FI_gene_label "RFX1^ENSG00000132005.9" ; ID "IL27RA--RFX1^ENST00000254325.9" ; Parent "IL27RA--RFX1^RFX1^ENSG00000132005.9" ; ccdsid "CCDS12301.1" ; exon_id "ENSE00003553019.1" ; exon_number 2 ; gene_id "IL27RA--RFX1^RFX1^ENSG00000132005.9" ; gene_name RFX1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000181979.4" ; havana_transcript "OTTHUMT00000458510.2" ; hgnc_id "HGNC:9982" ; level 2 ; orig_coord_info "chr19,13993525,13993843,-" ; protein_id "ENSP00000254325.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "IL27RA--RFX1^ENST00000254325.9" ; transcript_name "RFX1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
IL27RA--RFX1 HAVANA gene 1001 10742 . + . FI_gene_label "IL27RA^ENSG00000104998.4" ; ID "IL27RA--RFX1^IL27RA^ENSG00000104998.4" ; ccdsid "CCDS12303.1" ; exon_id "ENSE00001126468.3" ; exon_number 1 ; gene_id "IL27RA--RFX1^IL27RA^ENSG00000104998.4" ; gene_name IL27RA ; gene_type protein_coding ; havana_gene "OTTHUMG00000181990.3" ; havana_transcript "OTTHUMT00000458539.3" ; hgnc_id "HGNC:17290" ; level 2 ; orig_coord_info "chr19,14031873,14031972,+" ; protein_id "ENSP00000263379.1" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "IL27RA--RFX1^ENST00000263379.4" ; transcript_name "IL27RA-201" ; transcript_support_level 1 ; transcript_type protein_coding
IL27RA--RFX1 HAVANA mRNA 1001 10742 . + . FI_gene_label "IL27RA^ENSG00000104998.4" ; ID "IL27RA--RFX1^ENST00000263379.4" ; Parent "IL27RA--RFX1^IL27RA^ENSG00000104998.4" ; ccdsid "CCDS12303.1" ; exon_id "ENSE00001126468.3" ; exon_number 1 ; gene_id "IL27RA--RFX1^IL27RA^ENSG00000104998.4" ; gene_name IL27RA ; gene_type protein_coding ; havana_gene "OTTHUMG00000181990.3" ; havana_transcript "OTTHUMT00000458539.3" ; hgnc_id "HGNC:17290" ; level 2 ; orig_coord_info "chr19,14031873,14031972,+" ; protein_id "ENSP00000263379.1" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "IL27RA--RFX1^ENST00000263379.4" ; transcript_name "IL27RA-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
IL27RA--RLN3 HAVANA gene 1001 10742 . + . FI_gene_label "IL27RA^ENSG00000104998.4" ; ID "IL27RA--RLN3^IL27RA^ENSG00000104998.4" ; ccdsid "CCDS12303.1" ; exon_id "ENSE00001126468.3" ; exon_number 1 ; gene_id "IL27RA--RLN3^IL27RA^ENSG00000104998.4" ; gene_name IL27RA ; gene_type protein_coding ; havana_gene "OTTHUMG00000181990.3" ; havana_transcript "OTTHUMT00000458539.3" ; hgnc_id "HGNC:17290" ; level 2 ; orig_coord_info "chr19,14031873,14031972,+" ; protein_id "ENSP00000263379.1" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "IL27RA--RLN3^ENST00000263379.4" ; transcript_name "IL27RA-201" ; transcript_support_level 1 ; transcript_type protein_coding
IL27RA--RLN3 HAVANA mRNA 1001 10742 . + . FI_gene_label "IL27RA^ENSG00000104998.4" ; ID "IL27RA--RLN3^ENST00000263379.4" ; Parent "IL27RA--RLN3^IL27RA^ENSG00000104998.4" ; ccdsid "CCDS12303.1" ; exon_id "ENSE00001126468.3" ; exon_number 1 ; gene_id "IL27RA--RLN3^IL27RA^ENSG00000104998.4" ; gene_name IL27RA ; gene_type protein_coding ; havana_gene "OTTHUMG00000181990.3" ; havana_transcript "OTTHUMT00000458539.3" ; hgnc_id "HGNC:17290" ; level 2 ; orig_coord_info "chr19,14031873,14031972,+" ; protein_id "ENSP00000263379.1" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "IL27RA--RLN3^ENST00000263379.4" ; transcript_name "IL27RA-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
IL27RA--RLN3 HAVANA gene 13743 16296 . + . FI_gene_label "RLN3^ENSG00000171136.7" ; ID "IL27RA--RLN3^RLN3^ENSG00000171136.7" ; ccdsid "CCDS12302.1" ; exon_id "ENSE00001687869.2" ; exon_number 1 ; gene_id "IL27RA--RLN3^RLN3^ENSG00000171136.7" ; gene_name RLN3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000181986.2" ; havana_transcript "OTTHUMT00000458529.2" ; hgnc_id "HGNC:17135" ; level 2 ; orig_coord_info "chr19,14028205,14028394,+" ; protein_id "ENSP00000397415.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "IL27RA--RLN3^ENST00000431365.3" ; transcript_name "RLN3-201" ; transcript_support_level 1 ; transcript_type protein_coding
IL27RA--RLN3 HAVANA mRNA 13743 16296 . + . FI_gene_label "RLN3^ENSG00000171136.7" ; ID "IL27RA--RLN3^ENST00000431365.3" ; Parent "IL27RA--RLN3^RLN3^ENSG00000171136.7" ; ccdsid "CCDS12302.1" ; exon_id "ENSE00001687869.2" ; exon_number 1 ; gene_id "IL27RA--RLN3^RLN3^ENSG00000171136.7" ; gene_name RLN3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000181986.2" ; havana_transcript "OTTHUMT00000458529.2" ; hgnc_id "HGNC:17135" ; level 2 ; orig_coord_info "chr19,14028205,14028394,+" ; protein_id "ENSP00000397415.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "IL27RA--RLN3^ENST00000431365.3" ; transcript_name "RLN3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
KANSL1--AC103810.9 HAVANA gene 7306 43177 . + . FI_gene_label "KANSL1^ENSG00000120071.15" ; ID "KANSL1--AC103810.9^KANSL1^ENSG00000120071.15" ; ccdsid "CCDS11503.2" ; exon_id "ENSE00003614505.1" ; exon_number 2 ; gene_id "KANSL1--AC103810.9^KANSL1^ENSG00000120071.15" ; gene_name KANSL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178026.11" ; havana_transcript "OTTHUMT00000440274.2" ; hgnc_id "HGNC:24565" ; level 2 ; orig_coord_info "chr17,46170855,46172143,-" ; protein_id "ENSP00000262419.6" ; tag alternative_5_UTR NAGNAG_splice_site basic CCDS ; transcript_id "KANSL1--AC103810.9^ENST00000262419.10" ; transcript_name "KANSL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
KANSL1--AC103810.9 HAVANA mRNA 7306 43177 . + . FI_gene_label "KANSL1^ENSG00000120071.15" ; ID "KANSL1--AC103810.9^ENST00000262419.10" ; Parent "KANSL1--AC103810.9^KANSL1^ENSG00000120071.15" ; ccdsid "CCDS11503.2" ; exon_id "ENSE00003614505.1" ; exon_number 2 ; gene_id "KANSL1--AC103810.9^KANSL1^ENSG00000120071.15" ; gene_name KANSL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178026.11" ; havana_transcript "OTTHUMT00000440274.2" ; hgnc_id "HGNC:24565" ; level 2 ; orig_coord_info "chr17,46170855,46172143,-" ; protein_id "ENSP00000262419.6" ; tag alternative_5_UTR NAGNAG_splice_site basic CCDS ; transcript_id "KANSL1--AC103810.9^ENST00000262419.10" ; transcript_name "KANSL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
KANSL1--ANKRD40 HAVANA gene 7306 43177 . + . FI_gene_label "KANSL1^ENSG00000120071.15" ; ID "KANSL1--ANKRD40^KANSL1^ENSG00000120071.15" ; ccdsid "CCDS11503.2" ; exon_id "ENSE00003614505.1" ; exon_number 2 ; gene_id "KANSL1--ANKRD40^KANSL1^ENSG00000120071.15" ; gene_name KANSL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178026.11" ; havana_transcript "OTTHUMT00000440274.2" ; hgnc_id "HGNC:24565" ; level 2 ; orig_coord_info "chr17,46170855,46172143,-" ; protein_id "ENSP00000262419.6" ; tag alternative_5_UTR NAGNAG_splice_site basic CCDS ; transcript_id "KANSL1--ANKRD40^ENST00000262419.10" ; transcript_name "KANSL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
KANSL1--ANKRD40 HAVANA mRNA 7306 43177 . + . FI_gene_label "KANSL1^ENSG00000120071.15" ; ID "KANSL1--ANKRD40^ENST00000262419.10" ; Parent "KANSL1--ANKRD40^KANSL1^ENSG00000120071.15" ; ccdsid "CCDS11503.2" ; exon_id "ENSE00003614505.1" ; exon_number 2 ; gene_id "KANSL1--ANKRD40^KANSL1^ENSG00000120071.15" ; gene_name KANSL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178026.11" ; havana_transcript "OTTHUMT00000440274.2" ; hgnc_id "HGNC:24565" ; level 2 ; orig_coord_info "chr17,46170855,46172143,-" ; protein_id "ENSP00000262419.6" ; tag alternative_5_UTR NAGNAG_splice_site basic CCDS ; transcript_id "KANSL1--ANKRD40^ENST00000262419.10" ; transcript_name "KANSL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
KANSL1--ANKRD40 HAVANA gene 46218 54235 . + . FI_gene_label "ANKRD40^ENSG00000154945.7" ; ID "KANSL1--ANKRD40^ANKRD40^ENSG00000154945.7" ; ccdsid "CCDS11572.1" ; exon_id "ENSE00001109908.9" ; exon_number 1 ; gene_id "KANSL1--ANKRD40^ANKRD40^ENSG00000154945.7" ; gene_name ANKRD40 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162255.5" ; havana_transcript "OTTHUMT00000368201.3" ; hgnc_id "HGNC:28233" ; level 2 ; orig_coord_info "chr17,50707521,50707654,-" ; protein_id "ENSP00000285243.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "KANSL1--ANKRD40^ENST00000285243.7" ; transcript_name "ANKRD40-201" ; transcript_support_level 1 ; transcript_type protein_coding
KANSL1--ANKRD40 HAVANA mRNA 46218 54235 . + . FI_gene_label "ANKRD40^ENSG00000154945.7" ; ID "KANSL1--ANKRD40^ENST00000285243.7" ; Parent "KANSL1--ANKRD40^ANKRD40^ENSG00000154945.7" ; ccdsid "CCDS11572.1" ; exon_id "ENSE00001109908.9" ; exon_number 1 ; gene_id "KANSL1--ANKRD40^ANKRD40^ENSG00000154945.7" ; gene_name ANKRD40 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162255.5" ; havana_transcript "OTTHUMT00000368201.3" ; hgnc_id "HGNC:28233" ; level 2 ; orig_coord_info "chr17,50707521,50707654,-" ; protein_id "ENSP00000285243.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "KANSL1--ANKRD40^ENST00000285243.7" ; transcript_name "ANKRD40-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
KANSL1--DDX42 HAVANA gene 7306 43177 . + . FI_gene_label "KANSL1^ENSG00000120071.15" ; ID "KANSL1--DDX42^KANSL1^ENSG00000120071.15" ; ccdsid "CCDS11503.2" ; exon_id "ENSE00003614505.1" ; exon_number 2 ; gene_id "KANSL1--DDX42^KANSL1^ENSG00000120071.15" ; gene_name KANSL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178026.11" ; havana_transcript "OTTHUMT00000440274.2" ; hgnc_id "HGNC:24565" ; level 2 ; orig_coord_info "chr17,46170855,46172143,-" ; protein_id "ENSP00000262419.6" ; tag alternative_5_UTR NAGNAG_splice_site basic CCDS ; transcript_id "KANSL1--DDX42^ENST00000262419.10" ; transcript_name "KANSL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
KANSL1--DDX42 HAVANA mRNA 7306 43177 . + . FI_gene_label "KANSL1^ENSG00000120071.15" ; ID "KANSL1--DDX42^ENST00000262419.10" ; Parent "KANSL1--DDX42^KANSL1^ENSG00000120071.15" ; ccdsid "CCDS11503.2" ; exon_id "ENSE00003614505.1" ; exon_number 2 ; gene_id "KANSL1--DDX42^KANSL1^ENSG00000120071.15" ; gene_name KANSL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178026.11" ; havana_transcript "OTTHUMT00000440274.2" ; hgnc_id "HGNC:24565" ; level 2 ; orig_coord_info "chr17,46170855,46172143,-" ; protein_id "ENSP00000262419.6" ; tag alternative_5_UTR NAGNAG_splice_site basic CCDS ; transcript_id "KANSL1--DDX42^ENST00000262419.10" ; transcript_name "KANSL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
KANSL1--DDX42 HAVANA gene 46805 66637 . + . FI_gene_label "DDX42^ENSG00000198231.13" ; ID "KANSL1--DDX42^DDX42^ENSG00000198231.13" ; exon_id "ENSE00003656551.1" ; exon_number 2 ; gene_id "KANSL1--DDX42^DDX42^ENSG00000198231.13" ; gene_name DDX42 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179011.5" ; havana_transcript "OTTHUMT00000444370.2" ; hgnc_id "HGNC:18676" ; level 2 ; orig_coord_info "chr17,63792548,63792562,+" ; protein_id "ENSP00000352308.5" ; tag basic appris_alternative_2 ; transcript_id "KANSL1--DDX42^ENST00000359353.9" ; transcript_name "DDX42-201" ; transcript_support_level 5 ; transcript_type protein_coding
KANSL1--DDX42 HAVANA mRNA 46805 66637 . + . FI_gene_label "DDX42^ENSG00000198231.13" ; ID "KANSL1--DDX42^ENST00000359353.9" ; Parent "KANSL1--DDX42^DDX42^ENSG00000198231.13" ; exon_id "ENSE00003656551.1" ; exon_number 2 ; gene_id "KANSL1--DDX42^DDX42^ENSG00000198231.13" ; gene_name DDX42 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179011.5" ; havana_transcript "OTTHUMT00000444370.2" ; hgnc_id "HGNC:18676" ; level 2 ; orig_coord_info "chr17,63792548,63792562,+" ; protein_id "ENSP00000352308.5" ; tag basic appris_alternative_2 ; transcript_id "KANSL1--DDX42^ENST00000359353.9" ; transcript_name "DDX42-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
KANSL1--LRRC37A3 HAVANA gene 7306 43177 . + . FI_gene_label "KANSL1^ENSG00000120071.15" ; ID "KANSL1--LRRC37A3^KANSL1^ENSG00000120071.15" ; ccdsid "CCDS11503.2" ; exon_id "ENSE00003614505.1" ; exon_number 2 ; gene_id "KANSL1--LRRC37A3^KANSL1^ENSG00000120071.15" ; gene_name KANSL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178026.11" ; havana_transcript "OTTHUMT00000440274.2" ; hgnc_id "HGNC:24565" ; level 2 ; orig_coord_info "chr17,46170855,46172143,-" ; protein_id "ENSP00000262419.6" ; tag alternative_5_UTR NAGNAG_splice_site basic CCDS ; transcript_id "KANSL1--LRRC37A3^ENST00000262419.10" ; transcript_name "KANSL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
KANSL1--LRRC37A3 HAVANA mRNA 7306 43177 . + . FI_gene_label "KANSL1^ENSG00000120071.15" ; ID "KANSL1--LRRC37A3^ENST00000262419.10" ; Parent "KANSL1--LRRC37A3^KANSL1^ENSG00000120071.15" ; ccdsid "CCDS11503.2" ; exon_id "ENSE00003614505.1" ; exon_number 2 ; gene_id "KANSL1--LRRC37A3^KANSL1^ENSG00000120071.15" ; gene_name KANSL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178026.11" ; havana_transcript "OTTHUMT00000440274.2" ; hgnc_id "HGNC:24565" ; level 2 ; orig_coord_info "chr17,46170855,46172143,-" ; protein_id "ENSP00000262419.6" ; tag alternative_5_UTR NAGNAG_splice_site basic CCDS ; transcript_id "KANSL1--LRRC37A3^ENST00000262419.10" ; transcript_name "KANSL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
KANSL1--LRRC37A3 ENSEMBL gene 50863 67825 . + . FI_gene_label "LRRC37A3^ENSG00000176809.10" ; ID "KANSL1--LRRC37A3^LRRC37A3^ENSG00000176809.10" ; ccdsid "CCDS32708.1" ; exon_id "ENSE00001399635.2" ; exon_number 1 ; gene_id "KANSL1--LRRC37A3^LRRC37A3^ENSG00000176809.10" ; gene_name LRRC37A3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000132307.4" ; hgnc_id "HGNC:32427" ; level 3 ; orig_coord_info "chr17,64894649,64897257,-" ; protein_id "ENSP00000325713.5" ; tag basic appris_principal_1 CCDS ; transcript_id "KANSL1--LRRC37A3^ENST00000319651.9" ; transcript_name "LRRC37A3-201" ; transcript_support_level 1 ; transcript_type protein_coding
KANSL1--LRRC37A3 ENSEMBL mRNA 50863 67825 . + . FI_gene_label "LRRC37A3^ENSG00000176809.10" ; ID "KANSL1--LRRC37A3^ENST00000319651.9" ; Parent "KANSL1--LRRC37A3^LRRC37A3^ENSG00000176809.10" ; ccdsid "CCDS32708.1" ; exon_id "ENSE00001399635.2" ; exon_number 1 ; gene_id "KANSL1--LRRC37A3^LRRC37A3^ENSG00000176809.10" ; gene_name LRRC37A3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000132307.4" ; hgnc_id "HGNC:32427" ; level 3 ; orig_coord_info "chr17,64894649,64897257,-" ; protein_id "ENSP00000325713.5" ; tag basic appris_principal_1 CCDS ; transcript_id "KANSL1--LRRC37A3^ENST00000319651.9" ; transcript_name "LRRC37A3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
KANSL1--LRRC37A HAVANA gene 7306 43177 . + . FI_gene_label "KANSL1^ENSG00000120071.15" ; ID "KANSL1--LRRC37A^KANSL1^ENSG00000120071.15" ; ccdsid "CCDS11503.2" ; exon_id "ENSE00003614505.1" ; exon_number 2 ; gene_id "KANSL1--LRRC37A^KANSL1^ENSG00000120071.15" ; gene_name KANSL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178026.11" ; havana_transcript "OTTHUMT00000440274.2" ; hgnc_id "HGNC:24565" ; level 2 ; orig_coord_info "chr17,46170855,46172143,-" ; protein_id "ENSP00000262419.6" ; tag alternative_5_UTR NAGNAG_splice_site basic CCDS ; transcript_id "KANSL1--LRRC37A^ENST00000262419.10" ; transcript_name "KANSL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
KANSL1--LRRC37A HAVANA mRNA 7306 43177 . + . FI_gene_label "KANSL1^ENSG00000120071.15" ; ID "KANSL1--LRRC37A^ENST00000262419.10" ; Parent "KANSL1--LRRC37A^KANSL1^ENSG00000120071.15" ; ccdsid "CCDS11503.2" ; exon_id "ENSE00003614505.1" ; exon_number 2 ; gene_id "KANSL1--LRRC37A^KANSL1^ENSG00000120071.15" ; gene_name KANSL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178026.11" ; havana_transcript "OTTHUMT00000440274.2" ; hgnc_id "HGNC:24565" ; level 2 ; orig_coord_info "chr17,46170855,46172143,-" ; protein_id "ENSP00000262419.6" ; tag alternative_5_UTR NAGNAG_splice_site basic CCDS ; transcript_id "KANSL1--LRRC37A^ENST00000262419.10" ; transcript_name "KANSL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
KANSL1--LRRC37A HAVANA gene 48547 63684 . + . FI_gene_label "LRRC37A^ENSG00000176681.14" ; ID "KANSL1--LRRC37A^LRRC37A^ENSG00000176681.14" ; ccdsid "CCDS11504.2" ; exon_id "ENSE00002353704.1" ; exon_number 1 ; gene_id "KANSL1--LRRC37A^LRRC37A^ENSG00000176681.14" ; gene_name LRRC37A ; gene_type protein_coding ; havana_gene "OTTHUMG00000149841.4" ; havana_transcript "OTTHUMT00000313519.3" ; hgnc_id "HGNC:29069" ; level 2 ; orig_coord_info "chr17,46295134,46297742,+" ; protein_id "ENSP00000326324.5" ; tag basic appris_principal_2 CCDS ; transcript_id "KANSL1--LRRC37A^ENST00000320254.5" ; transcript_name "LRRC37A-201" ; transcript_support_level 1 ; transcript_type protein_coding
KANSL1--LRRC37A HAVANA mRNA 48547 63684 . + . FI_gene_label "LRRC37A^ENSG00000176681.14" ; ID "KANSL1--LRRC37A^ENST00000320254.5" ; Parent "KANSL1--LRRC37A^LRRC37A^ENSG00000176681.14" ; ccdsid "CCDS11504.2" ; exon_id "ENSE00002353704.1" ; exon_number 1 ; gene_id "KANSL1--LRRC37A^LRRC37A^ENSG00000176681.14" ; gene_name LRRC37A ; gene_type protein_coding ; havana_gene "OTTHUMG00000149841.4" ; havana_transcript "OTTHUMT00000313519.3" ; hgnc_id "HGNC:29069" ; level 2 ; orig_coord_info "chr17,46295134,46297742,+" ; protein_id "ENSP00000326324.5" ; tag basic appris_principal_2 CCDS ; transcript_id "KANSL1--LRRC37A^ENST00000320254.5" ; transcript_name "LRRC37A-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
KLHL22--SMPD4P1 HAVANA gene 1050 16423 . + . FI_gene_label "KLHL22^ENSG00000099910.17" ; ID "KLHL22--SMPD4P1^KLHL22^ENSG00000099910.17" ; ccdsid "CCDS13780.1" ; exon_id "ENSE00003616753.1" ; exon_number 2 ; gene_id "KLHL22--SMPD4P1^KLHL22^ENSG00000099910.17" ; gene_name KLHL22 ; gene_type protein_coding ; havana_gene "OTTHUMG00000188269.3" ; havana_transcript "OTTHUMT00000320045.3" ; hgnc_id "HGNC:25888" ; level 2 ; orig_coord_info "chr22,20488985,20489211,-" ; protein_id "ENSP00000331682.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "KLHL22--SMPD4P1^ENST00000328879.9" ; transcript_name "KLHL22-201" ; transcript_support_level 1 ; transcript_type protein_coding
KLHL22--SMPD4P1 HAVANA mRNA 1050 16423 . + . FI_gene_label "KLHL22^ENSG00000099910.17" ; ID "KLHL22--SMPD4P1^ENST00000328879.9" ; Parent "KLHL22--SMPD4P1^KLHL22^ENSG00000099910.17" ; ccdsid "CCDS13780.1" ; exon_id "ENSE00003616753.1" ; exon_number 2 ; gene_id "KLHL22--SMPD4P1^KLHL22^ENSG00000099910.17" ; gene_name KLHL22 ; gene_type protein_coding ; havana_gene "OTTHUMG00000188269.3" ; havana_transcript "OTTHUMT00000320045.3" ; hgnc_id "HGNC:25888" ; level 2 ; orig_coord_info "chr22,20488985,20489211,-" ; protein_id "ENSP00000331682.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "KLHL22--SMPD4P1^ENST00000328879.9" ; transcript_name "KLHL22-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
KLRC4--KLRK1 HAVANA gene 7417 15704 . + . FI_gene_label "KLRK1^ENSG00000213809.9" ; ID "KLRC4--KLRK1^KLRK1^ENSG00000213809.9" ; ccdsid "CCDS8623.1" ; exon_id "ENSE00003640305.1" ; exon_number 2 ; gene_id "KLRC4--KLRK1^KLRK1^ENSG00000213809.9" ; gene_name KLRK1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000168574.3" ; havana_transcript "OTTHUMT00000400269.2" ; hgnc_id "HGNC:18788" ; level 2 ; orig_coord_info "chr12,10388771,10388810,-" ; protein_id "ENSP00000240618.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "KLRC4--KLRK1^ENST00000240618.11" ; transcript_name "KLRK1-201" ; transcript_support_level 1 ; transcript_type protein_coding
KLRC4--KLRK1 HAVANA mRNA 7417 15704 . + . FI_gene_label "KLRK1^ENSG00000213809.9" ; ID "KLRC4--KLRK1^ENST00000240618.11" ; Parent "KLRC4--KLRK1^KLRK1^ENSG00000213809.9" ; ccdsid "CCDS8623.1" ; exon_id "ENSE00003640305.1" ; exon_number 2 ; gene_id "KLRC4--KLRK1^KLRK1^ENSG00000213809.9" ; gene_name KLRK1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000168574.3" ; havana_transcript "OTTHUMT00000400269.2" ; hgnc_id "HGNC:18788" ; level 2 ; orig_coord_info "chr12,10388771,10388810,-" ; protein_id "ENSP00000240618.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "KLRC4--KLRK1^ENST00000240618.11" ; transcript_name "KLRK1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
KLRC4--KLRK1 HAVANA gene 1001 3376 . + . FI_gene_label "KLRC4^ENSG00000183542.5" ; ID "KLRC4--KLRK1^KLRC4^ENSG00000183542.5" ; ccdsid "CCDS8624.1" ; exon_id "ENSE00001145174.1" ; exon_number 1 ; gene_id "KLRC4--KLRK1^KLRC4^ENSG00000183542.5" ; gene_name KLRC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000168575.2" ; havana_transcript "OTTHUMT00000400108.2" ; hgnc_id "HGNC:6377" ; level 2 ; orig_coord_info "chr12,10409389,10409575,-" ; protein_id "ENSP00000310216.1" ; tag basic appris_principal_1 CCDS ; transcript_id "KLRC4--KLRK1^ENST00000309384.2" ; transcript_name "KLRC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
KLRC4--KLRK1 HAVANA mRNA 1001 3376 . + . FI_gene_label "KLRC4^ENSG00000183542.5" ; ID "KLRC4--KLRK1^ENST00000309384.2" ; Parent "KLRC4--KLRK1^KLRC4^ENSG00000183542.5" ; ccdsid "CCDS8624.1" ; exon_id "ENSE00001145174.1" ; exon_number 1 ; gene_id "KLRC4--KLRK1^KLRC4^ENSG00000183542.5" ; gene_name KLRC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000168575.2" ; havana_transcript "OTTHUMT00000400108.2" ; hgnc_id "HGNC:6377" ; level 2 ; orig_coord_info "chr12,10409389,10409575,-" ; protein_id "ENSP00000310216.1" ; tag basic appris_principal_1 CCDS ; transcript_id "KLRC4--KLRK1^ENST00000309384.2" ; transcript_name "KLRC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
LINC-ROR--LRMDA HAVANA gene 18026 37293 . + . FI_gene_label "LRMDA^ENSG00000148655.15" ; ID "LINC-ROR--LRMDA^LRMDA^ENSG00000148655.15" ; ccdsid "CCDS7351.1" ; exon_id "ENSE00001457957.1" ; exon_number 1 ; gene_id "LINC-ROR--LRMDA^LRMDA^ENSG00000148655.15" ; gene_name LRMDA ; gene_type protein_coding ; havana_gene "OTTHUMG00000018532.5" ; havana_transcript "OTTHUMT00000048839.1" ; hgnc_id "HGNC:23405" ; level 2 ; orig_coord_info "chr10,75782976,75783022,+" ; protein_id "ENSP00000361577.1" ; tag basic CCDS ; transcript_id "LINC-ROR--LRMDA^ENST00000372499.5" ; transcript_name "LRMDA-201" ; transcript_support_level 1 ; transcript_type protein_coding
LINC-ROR--LRMDA HAVANA mRNA 18026 37293 . + . FI_gene_label "LRMDA^ENSG00000148655.15" ; ID "LINC-ROR--LRMDA^ENST00000372499.5" ; Parent "LINC-ROR--LRMDA^LRMDA^ENSG00000148655.15" ; ccdsid "CCDS7351.1" ; exon_id "ENSE00001457957.1" ; exon_number 1 ; gene_id "LINC-ROR--LRMDA^LRMDA^ENSG00000148655.15" ; gene_name LRMDA ; gene_type protein_coding ; havana_gene "OTTHUMG00000018532.5" ; havana_transcript "OTTHUMT00000048839.1" ; hgnc_id "HGNC:23405" ; level 2 ; orig_coord_info "chr10,75782976,75783022,+" ; protein_id "ENSP00000361577.1" ; tag basic CCDS ; transcript_id "LINC-ROR--LRMDA^ENST00000372499.5" ; transcript_name "LRMDA-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
LINC01953--IKZF2 HAVANA gene 7807 23944 . + . FI_gene_label "IKZF2^ENSG00000030419.16" ; ID "LINC01953--IKZF2^IKZF2^ENSG00000030419.16" ; exon_id "ENSE00003626229.1" ; exon_number 1 ; gene_id "LINC01953--IKZF2^IKZF2^ENSG00000030419.16" ; gene_name IKZF2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000133005.7" ; havana_transcript "OTTHUMT00000256594.1" ; hgnc_id "HGNC:13177" ; level 2 ; orig_coord_info "chr2,213150181,213150183,-" ; protein_id "ENSP00000342876.2" ; tag basic appris_alternative_1 ; transcript_id "LINC01953--IKZF2^ENST00000342002.6" ; transcript_name "IKZF2-201" ; transcript_support_level 1 ; transcript_type protein_coding
LINC01953--IKZF2 HAVANA mRNA 7807 23944 . + . FI_gene_label "IKZF2^ENSG00000030419.16" ; ID "LINC01953--IKZF2^ENST00000342002.6" ; Parent "LINC01953--IKZF2^IKZF2^ENSG00000030419.16" ; exon_id "ENSE00003626229.1" ; exon_number 1 ; gene_id "LINC01953--IKZF2^IKZF2^ENSG00000030419.16" ; gene_name IKZF2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000133005.7" ; havana_transcript "OTTHUMT00000256594.1" ; hgnc_id "HGNC:13177" ; level 2 ; orig_coord_info "chr2,213150181,213150183,-" ; protein_id "ENSP00000342876.2" ; tag basic appris_alternative_1 ; transcript_id "LINC01953--IKZF2^ENST00000342002.6" ; transcript_name "IKZF2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
LINC02210--LRRC37A HAVANA gene 30653 45790 . + . FI_gene_label "LRRC37A^ENSG00000176681.14" ; ID "LINC02210--LRRC37A^LRRC37A^ENSG00000176681.14" ; ccdsid "CCDS11504.2" ; exon_id "ENSE00002353704.1" ; exon_number 1 ; gene_id "LINC02210--LRRC37A^LRRC37A^ENSG00000176681.14" ; gene_name LRRC37A ; gene_type protein_coding ; havana_gene "OTTHUMG00000149841.4" ; havana_transcript "OTTHUMT00000313519.3" ; hgnc_id "HGNC:29069" ; level 2 ; orig_coord_info "chr17,46295134,46297742,+" ; protein_id "ENSP00000326324.5" ; tag basic appris_principal_2 CCDS ; transcript_id "LINC02210--LRRC37A^ENST00000320254.5" ; transcript_name "LRRC37A-201" ; transcript_support_level 1 ; transcript_type protein_coding
LINC02210--LRRC37A HAVANA mRNA 30653 45790 . + . FI_gene_label "LRRC37A^ENSG00000176681.14" ; ID "LINC02210--LRRC37A^ENST00000320254.5" ; Parent "LINC02210--LRRC37A^LRRC37A^ENSG00000176681.14" ; ccdsid "CCDS11504.2" ; exon_id "ENSE00002353704.1" ; exon_number 1 ; gene_id "LINC02210--LRRC37A^LRRC37A^ENSG00000176681.14" ; gene_name LRRC37A ; gene_type protein_coding ; havana_gene "OTTHUMG00000149841.4" ; havana_transcript "OTTHUMT00000313519.3" ; hgnc_id "HGNC:29069" ; level 2 ; orig_coord_info "chr17,46295134,46297742,+" ; protein_id "ENSP00000326324.5" ; tag basic appris_principal_2 CCDS ; transcript_id "LINC02210--LRRC37A^ENST00000320254.5" ; transcript_name "LRRC37A-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
LRRC37A3--AC103810.9 ENSEMBL gene 5646 22608 . + . FI_gene_label "LRRC37A3^ENSG00000176809.10" ; ID "LRRC37A3--AC103810.9^LRRC37A3^ENSG00000176809.10" ; ccdsid "CCDS32708.1" ; exon_id "ENSE00001399635.2" ; exon_number 1 ; gene_id "LRRC37A3--AC103810.9^LRRC37A3^ENSG00000176809.10" ; gene_name LRRC37A3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000132307.4" ; hgnc_id "HGNC:32427" ; level 3 ; orig_coord_info "chr17,64894649,64897257,-" ; protein_id "ENSP00000325713.5" ; tag basic appris_principal_1 CCDS ; transcript_id "LRRC37A3--AC103810.9^ENST00000319651.9" ; transcript_name "LRRC37A3-201" ; transcript_support_level 1 ; transcript_type protein_coding
LRRC37A3--AC103810.9 ENSEMBL mRNA 5646 22608 . + . FI_gene_label "LRRC37A3^ENSG00000176809.10" ; ID "LRRC37A3--AC103810.9^ENST00000319651.9" ; Parent "LRRC37A3--AC103810.9^LRRC37A3^ENSG00000176809.10" ; ccdsid "CCDS32708.1" ; exon_id "ENSE00001399635.2" ; exon_number 1 ; gene_id "LRRC37A3--AC103810.9^LRRC37A3^ENSG00000176809.10" ; gene_name LRRC37A3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000132307.4" ; hgnc_id "HGNC:32427" ; level 3 ; orig_coord_info "chr17,64894649,64897257,-" ; protein_id "ENSP00000325713.5" ; tag basic appris_principal_1 CCDS ; transcript_id "LRRC37A3--AC103810.9^ENST00000319651.9" ; transcript_name "LRRC37A3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MAP2K6--AFG3L2 HAVANA gene 31136 51108 . + . FI_gene_label "AFG3L2^ENSG00000141385.10" ; ID "MAP2K6--AFG3L2^AFG3L2^ENSG00000141385.10" ; ccdsid "CCDS11859.1" ; exon_id "ENSE00001255364.6" ; exon_number 1 ; gene_id "MAP2K6--AFG3L2^AFG3L2^ENSG00000141385.10" ; gene_name AFG3L2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000131695.4" ; havana_transcript "OTTHUMT00000254603.3" ; hgnc_id "HGNC:315" ; level 2 ; orig_coord_info "chr18,12376969,12377082,-" ; protein_id "ENSP00000269143.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "MAP2K6--AFG3L2^ENST00000269143.8" ; transcript_name "AFG3L2-201" ; transcript_support_level 1 ; transcript_type protein_coding
MAP2K6--AFG3L2 HAVANA mRNA 31136 51108 . + . FI_gene_label "AFG3L2^ENSG00000141385.10" ; ID "MAP2K6--AFG3L2^ENST00000269143.8" ; Parent "MAP2K6--AFG3L2^AFG3L2^ENSG00000141385.10" ; ccdsid "CCDS11859.1" ; exon_id "ENSE00001255364.6" ; exon_number 1 ; gene_id "MAP2K6--AFG3L2^AFG3L2^ENSG00000141385.10" ; gene_name AFG3L2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000131695.4" ; havana_transcript "OTTHUMT00000254603.3" ; hgnc_id "HGNC:315" ; level 2 ; orig_coord_info "chr18,12376969,12377082,-" ; protein_id "ENSP00000269143.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "MAP2K6--AFG3L2^ENST00000269143.8" ; transcript_name "AFG3L2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MAP2K6--AFG3L2 HAVANA gene 1138 16780 . + . FI_gene_label "MAP2K6^ENSG00000108984.15" ; ID "MAP2K6--AFG3L2^MAP2K6^ENSG00000108984.15" ; exon_id "ENSE00002819197.1" ; exon_number 1 ; gene_id "MAP2K6--AFG3L2^MAP2K6^ENSG00000108984.15" ; gene_name MAP2K6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000180311.4" ; havana_transcript "OTTHUMT00000450691.1" ; hgnc_id "HGNC:6846" ; level 2 ; orig_coord_info "chr17,69414985,69415000,+" ; protein_id "ENSP00000351997.3" ; tag not_organism_supported ; transcript_id "MAP2K6--AFG3L2^ENST00000359094.7" ; transcript_name "MAP2K6-201" ; transcript_support_level 5 ; transcript_type nonsense_mediated_decay
MAP2K6--AFG3L2 HAVANA mRNA 1138 16780 . + . FI_gene_label "MAP2K6^ENSG00000108984.15" ; ID "MAP2K6--AFG3L2^ENST00000359094.7" ; Parent "MAP2K6--AFG3L2^MAP2K6^ENSG00000108984.15" ; exon_id "ENSE00002819197.1" ; exon_number 1 ; gene_id "MAP2K6--AFG3L2^MAP2K6^ENSG00000108984.15" ; gene_name MAP2K6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000180311.4" ; havana_transcript "OTTHUMT00000450691.1" ; hgnc_id "HGNC:6846" ; level 2 ; orig_coord_info "chr17,69414985,69415000,+" ; protein_id "ENSP00000351997.3" ; tag not_organism_supported ; transcript_id "MAP2K6--AFG3L2^ENST00000359094.7" ; transcript_name "MAP2K6-201" ; transcript_support_level 5 ; transcript_type nonsense_mediated_decay
L1 and L2 created:
MAPK8--AGAP12P ENSEMBL gene 5765 21861 . + . FI_gene_label "MAPK8^ENSG00000107643.16" ; ID "MAPK8--AGAP12P^MAPK8^ENSG00000107643.16" ; ccdsid "CCDS60527.1" ; exon_id "ENSE00003833915.1" ; exon_number 1 ; gene_id "MAPK8--AGAP12P^MAPK8^ENSG00000107643.16" ; gene_name MAPK8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018172.5" ; hgnc_id "HGNC:6881" ; level 3 ; orig_coord_info "chr10,48401661,48401782,+" ; protein_id "ENSP00000353483.4" ; tag basic CCDS ; transcript_id "MAPK8--AGAP12P^ENST00000360332.7" ; transcript_name "MAPK8-201" ; transcript_support_level 1 ; transcript_type protein_coding
MAPK8--AGAP12P ENSEMBL mRNA 5765 21861 . + . FI_gene_label "MAPK8^ENSG00000107643.16" ; ID "MAPK8--AGAP12P^ENST00000360332.7" ; Parent "MAPK8--AGAP12P^MAPK8^ENSG00000107643.16" ; ccdsid "CCDS60527.1" ; exon_id "ENSE00003833915.1" ; exon_number 1 ; gene_id "MAPK8--AGAP12P^MAPK8^ENSG00000107643.16" ; gene_name MAPK8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018172.5" ; hgnc_id "HGNC:6881" ; level 3 ; orig_coord_info "chr10,48401661,48401782,+" ; protein_id "ENSP00000353483.4" ; tag basic CCDS ; transcript_id "MAPK8--AGAP12P^ENST00000360332.7" ; transcript_name "MAPK8-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MAPK8--AL591684.1 ENSEMBL gene 5765 21861 . + . FI_gene_label "MAPK8^ENSG00000107643.16" ; ID "MAPK8--AL591684.1^MAPK8^ENSG00000107643.16" ; ccdsid "CCDS60527.1" ; exon_id "ENSE00003833915.1" ; exon_number 1 ; gene_id "MAPK8--AL591684.1^MAPK8^ENSG00000107643.16" ; gene_name MAPK8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018172.5" ; hgnc_id "HGNC:6881" ; level 3 ; orig_coord_info "chr10,48401661,48401782,+" ; protein_id "ENSP00000353483.4" ; tag basic CCDS ; transcript_id "MAPK8--AL591684.1^ENST00000360332.7" ; transcript_name "MAPK8-201" ; transcript_support_level 1 ; transcript_type protein_coding
MAPK8--AL591684.1 ENSEMBL mRNA 5765 21861 . + . FI_gene_label "MAPK8^ENSG00000107643.16" ; ID "MAPK8--AL591684.1^ENST00000360332.7" ; Parent "MAPK8--AL591684.1^MAPK8^ENSG00000107643.16" ; ccdsid "CCDS60527.1" ; exon_id "ENSE00003833915.1" ; exon_number 1 ; gene_id "MAPK8--AL591684.1^MAPK8^ENSG00000107643.16" ; gene_name MAPK8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018172.5" ; hgnc_id "HGNC:6881" ; level 3 ; orig_coord_info "chr10,48401661,48401782,+" ; protein_id "ENSP00000353483.4" ; tag basic CCDS ; transcript_id "MAPK8--AL591684.1^ENST00000360332.7" ; transcript_name "MAPK8-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MBTD1--PPP1R1B HAVANA gene 25220 33663 . + . FI_gene_label "PPP1R1B^ENSG00000131771.14" ; ID "MBTD1--PPP1R1B^PPP1R1B^ENSG00000131771.14" ; ccdsid "CCDS11339.1" ; exon_id "ENSE00002305674.3" ; exon_number 1 ; gene_id "MBTD1--PPP1R1B^PPP1R1B^ENSG00000131771.14" ; gene_name PPP1R1B ; gene_type protein_coding ; havana_gene "OTTHUMG00000133210.8" ; havana_transcript "OTTHUMT00000256925.3" ; hgnc_id "HGNC:9287" ; level 2 ; orig_coord_info "chr17,39627393,39627473,+" ; protein_id "ENSP00000254079.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "MBTD1--PPP1R1B^ENST00000254079.9" ; transcript_name "PPP1R1B-201" ; transcript_support_level 1 ; transcript_type protein_coding
MBTD1--PPP1R1B HAVANA mRNA 25220 33663 . + . FI_gene_label "PPP1R1B^ENSG00000131771.14" ; ID "MBTD1--PPP1R1B^ENST00000254079.9" ; Parent "MBTD1--PPP1R1B^PPP1R1B^ENSG00000131771.14" ; ccdsid "CCDS11339.1" ; exon_id "ENSE00002305674.3" ; exon_number 1 ; gene_id "MBTD1--PPP1R1B^PPP1R1B^ENSG00000131771.14" ; gene_name PPP1R1B ; gene_type protein_coding ; havana_gene "OTTHUMG00000133210.8" ; havana_transcript "OTTHUMT00000256925.3" ; hgnc_id "HGNC:9287" ; level 2 ; orig_coord_info "chr17,39627393,39627473,+" ; protein_id "ENSP00000254079.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "MBTD1--PPP1R1B^ENST00000254079.9" ; transcript_name "PPP1R1B-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MBTD1--PPP1R1B ENSEMBL gene 9120 16664 . + . FI_gene_label "MBTD1^ENSG00000011258.16" ; ID "MBTD1--PPP1R1B^MBTD1^ENSG00000011258.16" ; exon_id "ENSE00003743801.1" ; exon_number 2 ; gene_id "MBTD1--PPP1R1B^MBTD1^ENSG00000011258.16" ; gene_name MBTD1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150442.4" ; hgnc_id "HGNC:19866" ; level 3 ; orig_coord_info "chr17,51206888,51206999,-" ; protein_id "ENSP00000365561.3" ; tag basic ; transcript_id "MBTD1--PPP1R1B^ENST00000376381.3" ; transcript_name "MBTD1-201" ; transcript_support_level 1 ; transcript_type protein_coding
MBTD1--PPP1R1B ENSEMBL mRNA 9120 16664 . + . FI_gene_label "MBTD1^ENSG00000011258.16" ; ID "MBTD1--PPP1R1B^ENST00000376381.3" ; Parent "MBTD1--PPP1R1B^MBTD1^ENSG00000011258.16" ; exon_id "ENSE00003743801.1" ; exon_number 2 ; gene_id "MBTD1--PPP1R1B^MBTD1^ENSG00000011258.16" ; gene_name MBTD1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150442.4" ; hgnc_id "HGNC:19866" ; level 3 ; orig_coord_info "chr17,51206888,51206999,-" ; protein_id "ENSP00000365561.3" ; tag basic ; transcript_id "MBTD1--PPP1R1B^ENST00000376381.3" ; transcript_name "MBTD1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MECOM--AC025033.1 ENSEMBL gene 8658 32731 . + . FI_gene_label "MECOM^ENSG00000085276.19" ; ID "MECOM--AC025033.1^MECOM^ENSG00000085276.19" ; ccdsid "CCDS54670.1" ; exon_id "ENSE00003659832.1" ; exon_number 2 ; gene_id "MECOM--AC025033.1^MECOM^ENSG00000085276.19" ; gene_name MECOM ; gene_type protein_coding ; havana_gene "OTTHUMG00000158596.9" ; hgnc_id "HGNC:3498" ; level 3 ; orig_coord_info "chr3,169144997,169144999,-" ; protein_id "ENSP00000264674.3" ; tag basic CCDS ; transcript_id "MECOM--AC025033.1^ENST00000264674.7" ; transcript_name "MECOM-201" ; transcript_support_level 1 ; transcript_type protein_coding
MECOM--AC025033.1 ENSEMBL mRNA 8658 32731 . + . FI_gene_label "MECOM^ENSG00000085276.19" ; ID "MECOM--AC025033.1^ENST00000264674.7" ; Parent "MECOM--AC025033.1^MECOM^ENSG00000085276.19" ; ccdsid "CCDS54670.1" ; exon_id "ENSE00003659832.1" ; exon_number 2 ; gene_id "MECOM--AC025033.1^MECOM^ENSG00000085276.19" ; gene_name MECOM ; gene_type protein_coding ; havana_gene "OTTHUMG00000158596.9" ; hgnc_id "HGNC:3498" ; level 3 ; orig_coord_info "chr3,169144997,169144999,-" ; protein_id "ENSP00000264674.3" ; tag basic CCDS ; transcript_id "MECOM--AC025033.1^ENST00000264674.7" ; transcript_name "MECOM-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MECOM--AC106707.1 ENSEMBL gene 8658 32731 . + . FI_gene_label "MECOM^ENSG00000085276.19" ; ID "MECOM--AC106707.1^MECOM^ENSG00000085276.19" ; ccdsid "CCDS54670.1" ; exon_id "ENSE00003659832.1" ; exon_number 2 ; gene_id "MECOM--AC106707.1^MECOM^ENSG00000085276.19" ; gene_name MECOM ; gene_type protein_coding ; havana_gene "OTTHUMG00000158596.9" ; hgnc_id "HGNC:3498" ; level 3 ; orig_coord_info "chr3,169144997,169144999,-" ; protein_id "ENSP00000264674.3" ; tag basic CCDS ; transcript_id "MECOM--AC106707.1^ENST00000264674.7" ; transcript_name "MECOM-201" ; transcript_support_level 1 ; transcript_type protein_coding
MECOM--AC106707.1 ENSEMBL mRNA 8658 32731 . + . FI_gene_label "MECOM^ENSG00000085276.19" ; ID "MECOM--AC106707.1^ENST00000264674.7" ; Parent "MECOM--AC106707.1^MECOM^ENSG00000085276.19" ; ccdsid "CCDS54670.1" ; exon_id "ENSE00003659832.1" ; exon_number 2 ; gene_id "MECOM--AC106707.1^MECOM^ENSG00000085276.19" ; gene_name MECOM ; gene_type protein_coding ; havana_gene "OTTHUMG00000158596.9" ; hgnc_id "HGNC:3498" ; level 3 ; orig_coord_info "chr3,169144997,169144999,-" ; protein_id "ENSP00000264674.3" ; tag basic CCDS ; transcript_id "MECOM--AC106707.1^ENST00000264674.7" ; transcript_name "MECOM-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MECOM--GFM1 HAVANA gene 35802 59856 . + . FI_gene_label "GFM1^ENSG00000168827.15" ; ID "MECOM--GFM1^GFM1^ENSG00000168827.15" ; ccdsid "CCDS77851.1" ; exon_id "ENSE00001839087.1" ; exon_number 1 ; gene_id "MECOM--GFM1^GFM1^ENSG00000168827.15" ; gene_name GFM1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000158804.5" ; havana_transcript "OTTHUMT00000352274.1" ; hgnc_id "HGNC:13780" ; level 2 ; orig_coord_info "chr3,158644635,158644715,+" ; protein_id "ENSP00000264263.5" ; tag basic appris_alternative_2 CCDS ; transcript_id "MECOM--GFM1^ENST00000264263.9" ; transcript_name "GFM1-201" ; transcript_support_level 5 ; transcript_type protein_coding
MECOM--GFM1 HAVANA mRNA 35802 59856 . + . FI_gene_label "GFM1^ENSG00000168827.15" ; ID "MECOM--GFM1^ENST00000264263.9" ; Parent "MECOM--GFM1^GFM1^ENSG00000168827.15" ; ccdsid "CCDS77851.1" ; exon_id "ENSE00001839087.1" ; exon_number 1 ; gene_id "MECOM--GFM1^GFM1^ENSG00000168827.15" ; gene_name GFM1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000158804.5" ; havana_transcript "OTTHUMT00000352274.1" ; hgnc_id "HGNC:13780" ; level 2 ; orig_coord_info "chr3,158644635,158644715,+" ; protein_id "ENSP00000264263.5" ; tag basic appris_alternative_2 CCDS ; transcript_id "MECOM--GFM1^ENST00000264263.9" ; transcript_name "GFM1-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
MECOM--GFM1 ENSEMBL gene 8658 32731 . + . FI_gene_label "MECOM^ENSG00000085276.19" ; ID "MECOM--GFM1^MECOM^ENSG00000085276.19" ; ccdsid "CCDS54670.1" ; exon_id "ENSE00003659832.1" ; exon_number 2 ; gene_id "MECOM--GFM1^MECOM^ENSG00000085276.19" ; gene_name MECOM ; gene_type protein_coding ; havana_gene "OTTHUMG00000158596.9" ; hgnc_id "HGNC:3498" ; level 3 ; orig_coord_info "chr3,169144997,169144999,-" ; protein_id "ENSP00000264674.3" ; tag basic CCDS ; transcript_id "MECOM--GFM1^ENST00000264674.7" ; transcript_name "MECOM-201" ; transcript_support_level 1 ; transcript_type protein_coding
MECOM--GFM1 ENSEMBL mRNA 8658 32731 . + . FI_gene_label "MECOM^ENSG00000085276.19" ; ID "MECOM--GFM1^ENST00000264674.7" ; Parent "MECOM--GFM1^MECOM^ENSG00000085276.19" ; ccdsid "CCDS54670.1" ; exon_id "ENSE00003659832.1" ; exon_number 2 ; gene_id "MECOM--GFM1^MECOM^ENSG00000085276.19" ; gene_name MECOM ; gene_type protein_coding ; havana_gene "OTTHUMG00000158596.9" ; hgnc_id "HGNC:3498" ; level 3 ; orig_coord_info "chr3,169144997,169144999,-" ; protein_id "ENSP00000264674.3" ; tag basic CCDS ; transcript_id "MECOM--GFM1^ENST00000264674.7" ; transcript_name "MECOM-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MED1--SKAP1 HAVANA gene 1010 23585 . + . FI_gene_label "MED1^ENSG00000125686.12" ; ID "MED1--SKAP1^MED1^ENSG00000125686.12" ; ccdsid "CCDS11336.1" ; exon_id "ENSE00002724355.2" ; exon_number 1 ; gene_id "MED1--SKAP1^MED1^ENSG00000125686.12" ; gene_name MED1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000133216.4" ; havana_transcript "OTTHUMT00000256943.4" ; hgnc_id "HGNC:9234" ; level 2 ; orig_coord_info "chr17,39451038,39451062,-" ; protein_id "ENSP00000300651.6" ; tag basic MANE_Select appris_principal_2 CCDS ; transcript_id "MED1--SKAP1^ENST00000300651.11" ; transcript_name "MED1-201" ; transcript_support_level 1 ; transcript_type protein_coding
MED1--SKAP1 HAVANA mRNA 1010 23585 . + . FI_gene_label "MED1^ENSG00000125686.12" ; ID "MED1--SKAP1^ENST00000300651.11" ; Parent "MED1--SKAP1^MED1^ENSG00000125686.12" ; ccdsid "CCDS11336.1" ; exon_id "ENSE00002724355.2" ; exon_number 1 ; gene_id "MED1--SKAP1^MED1^ENSG00000125686.12" ; gene_name MED1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000133216.4" ; havana_transcript "OTTHUMT00000256943.4" ; hgnc_id "HGNC:9234" ; level 2 ; orig_coord_info "chr17,39451038,39451062,-" ; protein_id "ENSP00000300651.6" ; tag basic MANE_Select appris_principal_2 CCDS ; transcript_id "MED1--SKAP1^ENST00000300651.11" ; transcript_name "MED1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MED1--SKAP1 HAVANA gene 26647 43608 . + . FI_gene_label "SKAP1^ENSG00000141293.16" ; ID "MED1--SKAP1^SKAP1^ENSG00000141293.16" ; ccdsid "CCDS32674.1" ; exon_id "ENSE00002733332.2" ; exon_number 1 ; gene_id "MED1--SKAP1^SKAP1^ENSG00000141293.16" ; gene_name SKAP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178823.3" ; havana_transcript "OTTHUMT00000443432.2" ; hgnc_id "HGNC:15605" ; level 2 ; orig_coord_info "chr17,48430075,48430120,-" ; protein_id "ENSP00000338171.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "MED1--SKAP1^ENST00000336915.11" ; transcript_name "SKAP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
MED1--SKAP1 HAVANA mRNA 26647 43608 . + . FI_gene_label "SKAP1^ENSG00000141293.16" ; ID "MED1--SKAP1^ENST00000336915.11" ; Parent "MED1--SKAP1^SKAP1^ENSG00000141293.16" ; ccdsid "CCDS32674.1" ; exon_id "ENSE00002733332.2" ; exon_number 1 ; gene_id "MED1--SKAP1^SKAP1^ENSG00000141293.16" ; gene_name SKAP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178823.3" ; havana_transcript "OTTHUMT00000443432.2" ; hgnc_id "HGNC:15605" ; level 2 ; orig_coord_info "chr17,48430075,48430120,-" ; protein_id "ENSP00000338171.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "MED1--SKAP1^ENST00000336915.11" ; transcript_name "SKAP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MSI2--AC005920.1 HAVANA gene 1673 54046 . + . FI_gene_label "MSI2^ENSG00000153944.12" ; ID "MSI2--AC005920.1^MSI2^ENSG00000153944.12" ; ccdsid "CCDS11596.1" ; exon_id "ENSE00002219180.3" ; exon_number 1 ; gene_id "MSI2--AC005920.1^MSI2^ENSG00000153944.12" ; gene_name MSI2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178398.4" ; havana_transcript "OTTHUMT00000441813.2" ; hgnc_id "HGNC:18585" ; level 2 ; orig_coord_info "chr17,57256743,57256804,+" ; protein_id "ENSP00000284073.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "MSI2--AC005920.1^ENST00000284073.7" ; transcript_name "MSI2-201" ; transcript_support_level 1 ; transcript_type protein_coding
MSI2--AC005920.1 HAVANA mRNA 1673 54046 . + . FI_gene_label "MSI2^ENSG00000153944.12" ; ID "MSI2--AC005920.1^ENST00000284073.7" ; Parent "MSI2--AC005920.1^MSI2^ENSG00000153944.12" ; ccdsid "CCDS11596.1" ; exon_id "ENSE00002219180.3" ; exon_number 1 ; gene_id "MSI2--AC005920.1^MSI2^ENSG00000153944.12" ; gene_name MSI2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178398.4" ; havana_transcript "OTTHUMT00000441813.2" ; hgnc_id "HGNC:18585" ; level 2 ; orig_coord_info "chr17,57256743,57256804,+" ; protein_id "ENSP00000284073.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "MSI2--AC005920.1^ENST00000284073.7" ; transcript_name "MSI2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MSI2--NEXMIF HAVANA gene 57067 71384 . + . FI_gene_label "NEXMIF^ENSG00000050030.16" ; ID "MSI2--NEXMIF^NEXMIF^ENSG00000050030.16" ; ccdsid "CCDS35337.1" ; exon_id "ENSE00001313509.1" ; exon_number 2 ; gene_id "MSI2--NEXMIF^NEXMIF^ENSG00000050030.16" ; gene_name NEXMIF ; gene_type protein_coding ; havana_gene "OTTHUMG00000021860.4" ; havana_transcript "OTTHUMT00000057270.4" ; hgnc_id "HGNC:29433" ; level 2 ; orig_coord_info "chrX,74745572,74745650,-" ; protein_id "ENSP00000055682.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "MSI2--NEXMIF^ENST00000055682.12" ; transcript_name "NEXMIF-201" ; transcript_support_level 1 ; transcript_type protein_coding
MSI2--NEXMIF HAVANA mRNA 57067 71384 . + . FI_gene_label "NEXMIF^ENSG00000050030.16" ; ID "MSI2--NEXMIF^ENST00000055682.12" ; Parent "MSI2--NEXMIF^NEXMIF^ENSG00000050030.16" ; ccdsid "CCDS35337.1" ; exon_id "ENSE00001313509.1" ; exon_number 2 ; gene_id "MSI2--NEXMIF^NEXMIF^ENSG00000050030.16" ; gene_name NEXMIF ; gene_type protein_coding ; havana_gene "OTTHUMG00000021860.4" ; havana_transcript "OTTHUMT00000057270.4" ; hgnc_id "HGNC:29433" ; level 2 ; orig_coord_info "chrX,74745572,74745650,-" ; protein_id "ENSP00000055682.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "MSI2--NEXMIF^ENST00000055682.12" ; transcript_name "NEXMIF-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MSI2--NEXMIF HAVANA gene 1673 54046 . + . FI_gene_label "MSI2^ENSG00000153944.12" ; ID "MSI2--NEXMIF^MSI2^ENSG00000153944.12" ; ccdsid "CCDS11596.1" ; exon_id "ENSE00002219180.3" ; exon_number 1 ; gene_id "MSI2--NEXMIF^MSI2^ENSG00000153944.12" ; gene_name MSI2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178398.4" ; havana_transcript "OTTHUMT00000441813.2" ; hgnc_id "HGNC:18585" ; level 2 ; orig_coord_info "chr17,57256743,57256804,+" ; protein_id "ENSP00000284073.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "MSI2--NEXMIF^ENST00000284073.7" ; transcript_name "MSI2-201" ; transcript_support_level 1 ; transcript_type protein_coding
MSI2--NEXMIF HAVANA mRNA 1673 54046 . + . FI_gene_label "MSI2^ENSG00000153944.12" ; ID "MSI2--NEXMIF^ENST00000284073.7" ; Parent "MSI2--NEXMIF^MSI2^ENSG00000153944.12" ; ccdsid "CCDS11596.1" ; exon_id "ENSE00002219180.3" ; exon_number 1 ; gene_id "MSI2--NEXMIF^MSI2^ENSG00000153944.12" ; gene_name MSI2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178398.4" ; havana_transcript "OTTHUMT00000441813.2" ; hgnc_id "HGNC:18585" ; level 2 ; orig_coord_info "chr17,57256743,57256804,+" ; protein_id "ENSP00000284073.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "MSI2--NEXMIF^ENST00000284073.7" ; transcript_name "MSI2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MSI2--NOS1AP HAVANA gene 1673 54046 . + . FI_gene_label "MSI2^ENSG00000153944.12" ; ID "MSI2--NOS1AP^MSI2^ENSG00000153944.12" ; ccdsid "CCDS11596.1" ; exon_id "ENSE00002219180.3" ; exon_number 1 ; gene_id "MSI2--NOS1AP^MSI2^ENSG00000153944.12" ; gene_name MSI2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178398.4" ; havana_transcript "OTTHUMT00000441813.2" ; hgnc_id "HGNC:18585" ; level 2 ; orig_coord_info "chr17,57256743,57256804,+" ; protein_id "ENSP00000284073.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "MSI2--NOS1AP^ENST00000284073.7" ; transcript_name "MSI2-201" ; transcript_support_level 1 ; transcript_type protein_coding
MSI2--NOS1AP HAVANA mRNA 1673 54046 . + . FI_gene_label "MSI2^ENSG00000153944.12" ; ID "MSI2--NOS1AP^ENST00000284073.7" ; Parent "MSI2--NOS1AP^MSI2^ENSG00000153944.12" ; ccdsid "CCDS11596.1" ; exon_id "ENSE00002219180.3" ; exon_number 1 ; gene_id "MSI2--NOS1AP^MSI2^ENSG00000153944.12" ; gene_name MSI2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178398.4" ; havana_transcript "OTTHUMT00000441813.2" ; hgnc_id "HGNC:18585" ; level 2 ; orig_coord_info "chr17,57256743,57256804,+" ; protein_id "ENSP00000284073.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "MSI2--NOS1AP^ENST00000284073.7" ; transcript_name "MSI2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MSI2--NOS1AP HAVANA gene 57047 75019 . + . FI_gene_label "NOS1AP^ENSG00000198929.13" ; ID "MSI2--NOS1AP^NOS1AP^ENSG00000198929.13" ; ccdsid "CCDS1237.1" ; exon_id "ENSE00001445962.4" ; exon_number 1 ; gene_id "MSI2--NOS1AP^NOS1AP^ENSG00000198929.13" ; gene_name NOS1AP ; gene_type protein_coding ; havana_gene "OTTHUMG00000024049.7" ; havana_transcript "OTTHUMT00000060555.3" ; hgnc_id "HGNC:16859" ; level 2 ; orig_coord_info "chr1,162070178,162070282,+" ; protein_id "ENSP00000355133.5" ; tag basic MANE_Select CCDS ; transcript_id "MSI2--NOS1AP^ENST00000361897.10" ; transcript_name "NOS1AP-201" ; transcript_support_level 1 ; transcript_type protein_coding
MSI2--NOS1AP HAVANA mRNA 57047 75019 . + . FI_gene_label "NOS1AP^ENSG00000198929.13" ; ID "MSI2--NOS1AP^ENST00000361897.10" ; Parent "MSI2--NOS1AP^NOS1AP^ENSG00000198929.13" ; ccdsid "CCDS1237.1" ; exon_id "ENSE00001445962.4" ; exon_number 1 ; gene_id "MSI2--NOS1AP^NOS1AP^ENSG00000198929.13" ; gene_name NOS1AP ; gene_type protein_coding ; havana_gene "OTTHUMG00000024049.7" ; havana_transcript "OTTHUMT00000060555.3" ; hgnc_id "HGNC:16859" ; level 2 ; orig_coord_info "chr1,162070178,162070282,+" ; protein_id "ENSP00000355133.5" ; tag basic MANE_Select CCDS ; transcript_id "MSI2--NOS1AP^ENST00000361897.10" ; transcript_name "NOS1AP-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MYNN--CR381670.2 HAVANA gene 1001 12665 . + . FI_gene_label "MYNN^ENSG00000085274.16" ; ID "MYNN--CR381670.2^MYNN^ENSG00000085274.16" ; ccdsid "CCDS3207.1" ; exon_id "ENSE00001366820.1" ; exon_number 2 ; gene_id "MYNN--CR381670.2^MYNN^ENSG00000085274.16" ; gene_name MYNN ; gene_type protein_coding ; havana_gene "OTTHUMG00000184027.1" ; havana_transcript "OTTHUMT00000467801.1" ; hgnc_id "HGNC:14955" ; level 2 ; orig_coord_info "chr3,169774296,169774561,+" ; protein_id "ENSP00000326240.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "MYNN--CR381670.2^ENST00000349841.10" ; transcript_name "MYNN-201" ; transcript_support_level 1 ; transcript_type protein_coding
MYNN--CR381670.2 HAVANA mRNA 1001 12665 . + . FI_gene_label "MYNN^ENSG00000085274.16" ; ID "MYNN--CR381670.2^ENST00000349841.10" ; Parent "MYNN--CR381670.2^MYNN^ENSG00000085274.16" ; ccdsid "CCDS3207.1" ; exon_id "ENSE00001366820.1" ; exon_number 2 ; gene_id "MYNN--CR381670.2^MYNN^ENSG00000085274.16" ; gene_name MYNN ; gene_type protein_coding ; havana_gene "OTTHUMG00000184027.1" ; havana_transcript "OTTHUMT00000467801.1" ; hgnc_id "HGNC:14955" ; level 2 ; orig_coord_info "chr3,169774296,169774561,+" ; protein_id "ENSP00000326240.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "MYNN--CR381670.2^ENST00000349841.10" ; transcript_name "MYNN-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MYT1--ABCB7 HAVANA gene 34710 54426 . + . FI_gene_label "ABCB7^ENSG00000131269.19" ; ID "MYT1--ABCB7^ABCB7^ENSG00000131269.19" ; ccdsid "CCDS14428.1" ; exon_id "ENSE00003844516.1" ; exon_number 1 ; gene_id "MYT1--ABCB7^ABCB7^ENSG00000131269.19" ; gene_name ABCB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000021862.11" ; havana_transcript "OTTHUMT00000497538.3" ; hgnc_id "HGNC:48" ; level 2 ; orig_coord_info "chrX,75156105,75156272,-" ; protein_id "ENSP00000253577.3" ; tag CAGE_supported_TSS 3_nested_supported_extension basic appris_alternative_1 CCDS ; transcript_id "MYT1--ABCB7^ENST00000253577.9" ; transcript_name "ABCB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
MYT1--ABCB7 HAVANA mRNA 34710 54426 . + . FI_gene_label "ABCB7^ENSG00000131269.19" ; ID "MYT1--ABCB7^ENST00000253577.9" ; Parent "MYT1--ABCB7^ABCB7^ENSG00000131269.19" ; ccdsid "CCDS14428.1" ; exon_id "ENSE00003844516.1" ; exon_number 1 ; gene_id "MYT1--ABCB7^ABCB7^ENSG00000131269.19" ; gene_name ABCB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000021862.11" ; havana_transcript "OTTHUMT00000497538.3" ; hgnc_id "HGNC:48" ; level 2 ; orig_coord_info "chrX,75156105,75156272,-" ; protein_id "ENSP00000253577.3" ; tag CAGE_supported_TSS 3_nested_supported_extension basic appris_alternative_1 CCDS ; transcript_id "MYT1--ABCB7^ENST00000253577.9" ; transcript_name "ABCB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MYT1--ABCB7 HAVANA gene 3377 31260 . + . FI_gene_label "MYT1^ENSG00000196132.14" ; ID "MYT1--ABCB7^MYT1^ENSG00000196132.14" ; ccdsid "CCDS13558.1" ; exon_id "ENSE00003756160.1" ; exon_number 3 ; gene_id "MYT1--ABCB7^MYT1^ENSG00000196132.14" ; gene_name MYT1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000149988.8" ; havana_transcript "OTTHUMT00000080297.3" ; hgnc_id "HGNC:7622" ; level 2 ; orig_coord_info "chr20,64198862,64198916,+" ; protein_id "ENSP00000327465.1" ; tag basic MANE_Select CCDS ; transcript_id "MYT1--ABCB7^ENST00000328439.6" ; transcript_name "MYT1-201" ; transcript_support_level 1 ; transcript_type protein_coding
MYT1--ABCB7 HAVANA mRNA 3377 31260 . + . FI_gene_label "MYT1^ENSG00000196132.14" ; ID "MYT1--ABCB7^ENST00000328439.6" ; Parent "MYT1--ABCB7^MYT1^ENSG00000196132.14" ; ccdsid "CCDS13558.1" ; exon_id "ENSE00003756160.1" ; exon_number 3 ; gene_id "MYT1--ABCB7^MYT1^ENSG00000196132.14" ; gene_name MYT1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000149988.8" ; havana_transcript "OTTHUMT00000080297.3" ; hgnc_id "HGNC:7622" ; level 2 ; orig_coord_info "chr20,64198862,64198916,+" ; protein_id "ENSP00000327465.1" ; tag basic MANE_Select CCDS ; transcript_id "MYT1--ABCB7^ENST00000328439.6" ; transcript_name "MYT1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MYT1--CDKAL1 HAVANA gene 34261 54742 . + . FI_gene_label "CDKAL1^ENSG00000145996.11" ; ID "MYT1--CDKAL1^CDKAL1^ENSG00000145996.11" ; ccdsid "CCDS4546.1" ; exon_id "ENSE00003893317.1" ; exon_number 3 ; gene_id "MYT1--CDKAL1^CDKAL1^ENSG00000145996.11" ; gene_name CDKAL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000014340.2" ; havana_transcript "OTTHUMT00000504200.1" ; hgnc_id "HGNC:21050" ; level 2 ; orig_coord_info "chr6,20546351,20546523,+" ; protein_id "ENSP00000274695.4" ; tag RNA_Seq_supported_only basic MANE_Select appris_principal_1 CCDS ; transcript_id "MYT1--CDKAL1^ENST00000274695.8" ; transcript_name "CDKAL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
MYT1--CDKAL1 HAVANA mRNA 34261 54742 . + . FI_gene_label "CDKAL1^ENSG00000145996.11" ; ID "MYT1--CDKAL1^ENST00000274695.8" ; Parent "MYT1--CDKAL1^CDKAL1^ENSG00000145996.11" ; ccdsid "CCDS4546.1" ; exon_id "ENSE00003893317.1" ; exon_number 3 ; gene_id "MYT1--CDKAL1^CDKAL1^ENSG00000145996.11" ; gene_name CDKAL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000014340.2" ; havana_transcript "OTTHUMT00000504200.1" ; hgnc_id "HGNC:21050" ; level 2 ; orig_coord_info "chr6,20546351,20546523,+" ; protein_id "ENSP00000274695.4" ; tag RNA_Seq_supported_only basic MANE_Select appris_principal_1 CCDS ; transcript_id "MYT1--CDKAL1^ENST00000274695.8" ; transcript_name "CDKAL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MYT1--CDKAL1 HAVANA gene 3377 31260 . + . FI_gene_label "MYT1^ENSG00000196132.14" ; ID "MYT1--CDKAL1^MYT1^ENSG00000196132.14" ; ccdsid "CCDS13558.1" ; exon_id "ENSE00003756160.1" ; exon_number 3 ; gene_id "MYT1--CDKAL1^MYT1^ENSG00000196132.14" ; gene_name MYT1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000149988.8" ; havana_transcript "OTTHUMT00000080297.3" ; hgnc_id "HGNC:7622" ; level 2 ; orig_coord_info "chr20,64198862,64198916,+" ; protein_id "ENSP00000327465.1" ; tag basic MANE_Select CCDS ; transcript_id "MYT1--CDKAL1^ENST00000328439.6" ; transcript_name "MYT1-201" ; transcript_support_level 1 ; transcript_type protein_coding
MYT1--CDKAL1 HAVANA mRNA 3377 31260 . + . FI_gene_label "MYT1^ENSG00000196132.14" ; ID "MYT1--CDKAL1^ENST00000328439.6" ; Parent "MYT1--CDKAL1^MYT1^ENSG00000196132.14" ; ccdsid "CCDS13558.1" ; exon_id "ENSE00003756160.1" ; exon_number 3 ; gene_id "MYT1--CDKAL1^MYT1^ENSG00000196132.14" ; gene_name MYT1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000149988.8" ; havana_transcript "OTTHUMT00000080297.3" ; hgnc_id "HGNC:7622" ; level 2 ; orig_coord_info "chr20,64198862,64198916,+" ; protein_id "ENSP00000327465.1" ; tag basic MANE_Select CCDS ; transcript_id "MYT1--CDKAL1^ENST00000328439.6" ; transcript_name "MYT1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
NBR2--IKZF3 HAVANA gene 13701 23256 . + . FI_gene_label "IKZF3^ENSG00000161405.17" ; ID "NBR2--IKZF3^IKZF3^ENSG00000161405.17" ; exon_id "ENSE00002692875.1" ; exon_number 1 ; gene_id "NBR2--IKZF3^IKZF3^ENSG00000161405.17" ; gene_name IKZF3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000133250.5" ; havana_transcript "OTTHUMT00000257011.2" ; hgnc_id "HGNC:13178" ; level 2 ; orig_coord_info "chr17,39864120,39864126,-" ; protein_id "ENSP00000462791.1" ; transcript_id "NBR2--IKZF3^ENST00000293068.9" ; transcript_name "IKZF3-201" ; transcript_support_level 1 ; transcript_type nonsense_mediated_decay
NBR2--IKZF3 HAVANA mRNA 13701 23256 . + . FI_gene_label "IKZF3^ENSG00000161405.17" ; ID "NBR2--IKZF3^ENST00000293068.9" ; Parent "NBR2--IKZF3^IKZF3^ENSG00000161405.17" ; exon_id "ENSE00002692875.1" ; exon_number 1 ; gene_id "NBR2--IKZF3^IKZF3^ENSG00000161405.17" ; gene_name IKZF3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000133250.5" ; havana_transcript "OTTHUMT00000257011.2" ; hgnc_id "HGNC:13178" ; level 2 ; orig_coord_info "chr17,39864120,39864126,-" ; protein_id "ENSP00000462791.1" ; transcript_id "NBR2--IKZF3^ENST00000293068.9" ; transcript_name "IKZF3-201" ; transcript_support_level 1 ; transcript_type nonsense_mediated_decay
L1 and L2 created:
NME7--SELP HAVANA gene 23766 41086 . + . FI_gene_label "SELP^ENSG00000174175.17" ; ID "NME7--SELP^SELP^ENSG00000174175.17" ; ccdsid "CCDS1282.1" ; exon_id "ENSE00001445625.2" ; exon_number 1 ; gene_id "NME7--SELP^SELP^ENSG00000174175.17" ; gene_name SELP ; gene_type protein_coding ; havana_gene "OTTHUMG00000034685.10" ; havana_transcript "OTTHUMT00000083916.5" ; hgnc_id "HGNC:10721" ; level 2 ; orig_coord_info "chr1,169630072,169630074,-" ; protein_id "ENSP00000263686.5" ; tag dotter_confirmed basic MANE_Select appris_principal_1 CCDS ; transcript_id "NME7--SELP^ENST00000263686.11" ; transcript_name "SELP-201" ; transcript_support_level 1 ; transcript_type protein_coding
NME7--SELP HAVANA mRNA 23766 41086 . + . FI_gene_label "SELP^ENSG00000174175.17" ; ID "NME7--SELP^ENST00000263686.11" ; Parent "NME7--SELP^SELP^ENSG00000174175.17" ; ccdsid "CCDS1282.1" ; exon_id "ENSE00001445625.2" ; exon_number 1 ; gene_id "NME7--SELP^SELP^ENSG00000174175.17" ; gene_name SELP ; gene_type protein_coding ; havana_gene "OTTHUMG00000034685.10" ; havana_transcript "OTTHUMT00000083916.5" ; hgnc_id "HGNC:10721" ; level 2 ; orig_coord_info "chr1,169630072,169630074,-" ; protein_id "ENSP00000263686.5" ; tag dotter_confirmed basic MANE_Select appris_principal_1 CCDS ; transcript_id "NME7--SELP^ENST00000263686.11" ; transcript_name "SELP-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
NME7--SELP HAVANA gene 1152 20696 . + . FI_gene_label "NME7^ENSG00000143156.14" ; ID "NME7--SELP^NME7^ENSG00000143156.14" ; ccdsid "CCDS1277.1" ; exon_id "ENSE00001857932.2" ; exon_number 1 ; gene_id "NME7--SELP^NME7^ENSG00000143156.14" ; gene_name NME7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000034586.5" ; havana_transcript "OTTHUMT00000083688.2" ; hgnc_id "HGNC:20461" ; level 2 ; orig_coord_info "chr1,169367708,169367710,-" ; protein_id "ENSP00000356785.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "NME7--SELP^ENST00000367811.8" ; transcript_name "NME7-201" ; transcript_support_level 1 ; transcript_type protein_coding
NME7--SELP HAVANA mRNA 1152 20696 . + . FI_gene_label "NME7^ENSG00000143156.14" ; ID "NME7--SELP^ENST00000367811.8" ; Parent "NME7--SELP^NME7^ENSG00000143156.14" ; ccdsid "CCDS1277.1" ; exon_id "ENSE00001857932.2" ; exon_number 1 ; gene_id "NME7--SELP^NME7^ENSG00000143156.14" ; gene_name NME7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000034586.5" ; havana_transcript "OTTHUMT00000083688.2" ; hgnc_id "HGNC:20461" ; level 2 ; orig_coord_info "chr1,169367708,169367710,-" ; protein_id "ENSP00000356785.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "NME7--SELP^ENST00000367811.8" ; transcript_name "NME7-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
NPEPPSP1--SEH1L HAVANA gene 15362 35157 . + . FI_gene_label "SEH1L^ENSG00000085415.16" ; ID "NPEPPSP1--SEH1L^SEH1L^ENSG00000085415.16" ; ccdsid "CCDS45832.1" ; exon_id "ENSE00001277935.9" ; exon_number 1 ; gene_id "NPEPPSP1--SEH1L^SEH1L^ENSG00000085415.16" ; gene_name SEH1L ; gene_type protein_coding ; havana_gene "OTTHUMG00000181909.3" ; havana_transcript "OTTHUMT00000458254.1" ; hgnc_id "HGNC:30379" ; level 2 ; orig_coord_info "chr18,12948122,12948232,+" ; protein_id "ENSP00000262124.10" ; tag basic appris_alternative_1 CCDS ; transcript_id "NPEPPSP1--SEH1L^ENST00000262124.15" ; transcript_name "SEH1L-201" ; transcript_support_level 1 ; transcript_type protein_coding
NPEPPSP1--SEH1L HAVANA mRNA 15362 35157 . + . FI_gene_label "SEH1L^ENSG00000085415.16" ; ID "NPEPPSP1--SEH1L^ENST00000262124.15" ; Parent "NPEPPSP1--SEH1L^SEH1L^ENSG00000085415.16" ; ccdsid "CCDS45832.1" ; exon_id "ENSE00001277935.9" ; exon_number 1 ; gene_id "NPEPPSP1--SEH1L^SEH1L^ENSG00000085415.16" ; gene_name SEH1L ; gene_type protein_coding ; havana_gene "OTTHUMG00000181909.3" ; havana_transcript "OTTHUMT00000458254.1" ; hgnc_id "HGNC:30379" ; level 2 ; orig_coord_info "chr18,12948122,12948232,+" ; protein_id "ENSP00000262124.10" ; tag basic appris_alternative_1 CCDS ; transcript_id "NPEPPSP1--SEH1L^ENST00000262124.15" ; transcript_name "SEH1L-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
NPHP3--ACAD11 HAVANA gene 34363 56719 . + . FI_gene_label "ACAD11^ENSG00000240303.8" ; ID "NPHP3--ACAD11^ACAD11^ENSG00000240303.8" ; ccdsid "CCDS3074.1" ; exon_id "ENSE00001878063.2" ; exon_number 1 ; gene_id "NPHP3--ACAD11^ACAD11^ENSG00000240303.8" ; gene_name ACAD11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000159780.6" ; havana_transcript "OTTHUMT00000357279.4" ; hgnc_id "HGNC:30211" ; level 2 ; orig_coord_info "chr3,132659603,132659751,-" ; protein_id "ENSP00000264990.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "NPHP3--ACAD11^ENST00000264990.11" ; transcript_name "ACAD11-201" ; transcript_support_level 1 ; transcript_type protein_coding
NPHP3--ACAD11 HAVANA mRNA 34363 56719 . + . FI_gene_label "ACAD11^ENSG00000240303.8" ; ID "NPHP3--ACAD11^ENST00000264990.11" ; Parent "NPHP3--ACAD11^ACAD11^ENSG00000240303.8" ; ccdsid "CCDS3074.1" ; exon_id "ENSE00001878063.2" ; exon_number 1 ; gene_id "NPHP3--ACAD11^ACAD11^ENSG00000240303.8" ; gene_name ACAD11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000159780.6" ; havana_transcript "OTTHUMT00000357279.4" ; hgnc_id "HGNC:30211" ; level 2 ; orig_coord_info "chr3,132659603,132659751,-" ; protein_id "ENSP00000264990.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "NPHP3--ACAD11^ENST00000264990.11" ; transcript_name "ACAD11-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
NPHP3--ACAD11 HAVANA gene 1006 31089 . + . FI_gene_label "NPHP3^ENSG00000113971.20" ; ID "NPHP3--ACAD11^NPHP3^ENSG00000113971.20" ; ccdsid "CCDS3078.1" ; exon_id "ENSE00001810363.2" ; exon_number 1 ; gene_id "NPHP3--ACAD11^NPHP3^ENSG00000113971.20" ; gene_name NPHP3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000159713.4" ; havana_transcript "OTTHUMT00000357020.3" ; hgnc_id "HGNC:7907" ; level 2 ; orig_coord_info "chr3,132721963,132722355,-" ; protein_id "ENSP00000338766.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "NPHP3--ACAD11^ENST00000337331.10" ; transcript_name "NPHP3-201" ; transcript_support_level 1 ; transcript_type protein_coding
NPHP3--ACAD11 HAVANA mRNA 1006 31089 . + . FI_gene_label "NPHP3^ENSG00000113971.20" ; ID "NPHP3--ACAD11^ENST00000337331.10" ; Parent "NPHP3--ACAD11^NPHP3^ENSG00000113971.20" ; ccdsid "CCDS3078.1" ; exon_id "ENSE00001810363.2" ; exon_number 1 ; gene_id "NPHP3--ACAD11^NPHP3^ENSG00000113971.20" ; gene_name NPHP3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000159713.4" ; havana_transcript "OTTHUMT00000357020.3" ; hgnc_id "HGNC:7907" ; level 2 ; orig_coord_info "chr3,132721963,132722355,-" ; protein_id "ENSP00000338766.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "NPHP3--ACAD11^ENST00000337331.10" ; transcript_name "NPHP3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
OR8D1--OR8A1 HAVANA gene 16271 17648 . + . FI_gene_label "OR8A1^ENSG00000196119.8" ; ID "OR8D1--OR8A1^OR8A1^ENSG00000196119.8" ; exon_id "ENSE00001014261.5" ; exon_number 1 ; gene_id "OR8D1--OR8A1^OR8A1^ENSG00000196119.8" ; gene_name OR8A1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000165923.3" ; havana_transcript "OTTHUMT00000387062.3" ; hgnc_id "HGNC:8469" ; level 2 ; orig_coord_info "chr11,124570120,124571046,+" ; protein_id "ENSP00000284287.4" ; tag basic MANE_Select appris_principal_1 ; transcript_id "OR8D1--OR8A1^ENST00000284287.6" ; transcript_name "OR8A1-201" ; transcript_support_level NA ; transcript_type protein_coding
OR8D1--OR8A1 HAVANA mRNA 16271 17648 . + . FI_gene_label "OR8A1^ENSG00000196119.8" ; ID "OR8D1--OR8A1^ENST00000284287.6" ; Parent "OR8D1--OR8A1^OR8A1^ENSG00000196119.8" ; exon_id "ENSE00001014261.5" ; exon_number 1 ; gene_id "OR8D1--OR8A1^OR8A1^ENSG00000196119.8" ; gene_name OR8A1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000165923.3" ; havana_transcript "OTTHUMT00000387062.3" ; hgnc_id "HGNC:8469" ; level 2 ; orig_coord_info "chr11,124570120,124571046,+" ; protein_id "ENSP00000284287.4" ; tag basic MANE_Select appris_principal_1 ; transcript_id "OR8D1--OR8A1^ENST00000284287.6" ; transcript_name "OR8A1-201" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
OR8D1--OR8A1 HAVANA gene 4219 5244 . + . FI_gene_label "OR8D1^ENSG00000196341.3" ; ID "OR8D1--OR8A1^OR8D1^ENSG00000196341.3" ; ccdsid "CCDS31706.1" ; exon_id "ENSE00001413995.2" ; exon_number 1 ; gene_id "OR8D1--OR8A1^OR8D1^ENSG00000196341.3" ; gene_name OR8D1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000165977.2" ; havana_transcript "OTTHUMT00000387285.2" ; hgnc_id "HGNC:8481" ; level 2 ; orig_coord_info "chr11,124309843,124310766,-" ; protein_id "ENSP00000350474.2" ; tag basic appris_principal_1 CCDS ; transcript_id "OR8D1--OR8A1^ENST00000357821.2" ; transcript_name "OR8D1-201" ; transcript_support_level NA ; transcript_type protein_coding
OR8D1--OR8A1 HAVANA mRNA 4219 5244 . + . FI_gene_label "OR8D1^ENSG00000196341.3" ; ID "OR8D1--OR8A1^ENST00000357821.2" ; Parent "OR8D1--OR8A1^OR8D1^ENSG00000196341.3" ; ccdsid "CCDS31706.1" ; exon_id "ENSE00001413995.2" ; exon_number 1 ; gene_id "OR8D1--OR8A1^OR8D1^ENSG00000196341.3" ; gene_name OR8D1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000165977.2" ; havana_transcript "OTTHUMT00000387285.2" ; hgnc_id "HGNC:8481" ; level 2 ; orig_coord_info "chr11,124309843,124310766,-" ; protein_id "ENSP00000350474.2" ; tag basic appris_principal_1 CCDS ; transcript_id "OR8D1--OR8A1^ENST00000357821.2" ; transcript_name "OR8D1-201" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PBX1--LINC00824 HAVANA gene 2360 25388 . + . FI_gene_label "PBX1^ENSG00000185630.19" ; ID "PBX1--LINC00824^PBX1^ENSG00000185630.19" ; exon_id "ENSE00003497959.1" ; exon_number 2 ; gene_id "PBX1--LINC00824^PBX1^ENSG00000185630.19" ; gene_name PBX1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000034307.13" ; havana_transcript "OTTHUMT00000083109.5" ; hgnc_id "HGNC:8632" ; level 2 ; orig_coord_info "chr1,164559823,164560013,+" ; protein_id "ENSP00000341455.3" ; tag alternative_5_UTR mRNA_end_NF cds_end_NF ; transcript_id "PBX1--LINC00824^ENST00000340699.7" ; transcript_name "PBX1-201" ; transcript_support_level 4 ; transcript_type protein_coding
PBX1--LINC00824 HAVANA mRNA 2360 25388 . + . FI_gene_label "PBX1^ENSG00000185630.19" ; ID "PBX1--LINC00824^ENST00000340699.7" ; Parent "PBX1--LINC00824^PBX1^ENSG00000185630.19" ; exon_id "ENSE00003497959.1" ; exon_number 2 ; gene_id "PBX1--LINC00824^PBX1^ENSG00000185630.19" ; gene_name PBX1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000034307.13" ; havana_transcript "OTTHUMT00000083109.5" ; hgnc_id "HGNC:8632" ; level 2 ; orig_coord_info "chr1,164559823,164560013,+" ; protein_id "ENSP00000341455.3" ; tag alternative_5_UTR mRNA_end_NF cds_end_NF ; transcript_id "PBX1--LINC00824^ENST00000340699.7" ; transcript_name "PBX1-201" ; transcript_support_level 4 ; transcript_type protein_coding
L1 and L2 created:
PBX1--SLC7A11-AS1 HAVANA gene 2360 25388 . + . FI_gene_label "PBX1^ENSG00000185630.19" ; ID "PBX1--SLC7A11-AS1^PBX1^ENSG00000185630.19" ; exon_id "ENSE00003497959.1" ; exon_number 2 ; gene_id "PBX1--SLC7A11-AS1^PBX1^ENSG00000185630.19" ; gene_name PBX1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000034307.13" ; havana_transcript "OTTHUMT00000083109.5" ; hgnc_id "HGNC:8632" ; level 2 ; orig_coord_info "chr1,164559823,164560013,+" ; protein_id "ENSP00000341455.3" ; tag alternative_5_UTR mRNA_end_NF cds_end_NF ; transcript_id "PBX1--SLC7A11-AS1^ENST00000340699.7" ; transcript_name "PBX1-201" ; transcript_support_level 4 ; transcript_type protein_coding
PBX1--SLC7A11-AS1 HAVANA mRNA 2360 25388 . + . FI_gene_label "PBX1^ENSG00000185630.19" ; ID "PBX1--SLC7A11-AS1^ENST00000340699.7" ; Parent "PBX1--SLC7A11-AS1^PBX1^ENSG00000185630.19" ; exon_id "ENSE00003497959.1" ; exon_number 2 ; gene_id "PBX1--SLC7A11-AS1^PBX1^ENSG00000185630.19" ; gene_name PBX1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000034307.13" ; havana_transcript "OTTHUMT00000083109.5" ; hgnc_id "HGNC:8632" ; level 2 ; orig_coord_info "chr1,164559823,164560013,+" ; protein_id "ENSP00000341455.3" ; tag alternative_5_UTR mRNA_end_NF cds_end_NF ; transcript_id "PBX1--SLC7A11-AS1^ENST00000340699.7" ; transcript_name "PBX1-201" ; transcript_support_level 4 ; transcript_type protein_coding
L1 and L2 created:
PCDHA11--PCDHA13 HAVANA gene 7419 15859 . + . FI_gene_label "PCDHA13^ENSG00000239389.8" ; ID "PCDHA11--PCDHA13^PCDHA13^ENSG00000239389.8" ; ccdsid "CCDS4240.1" ; exon_id "ENSE00001038419.2" ; exon_number 1 ; gene_id "PCDHA11--PCDHA13^PCDHA13^ENSG00000239389.8" ; gene_name PCDHA13 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129614.4" ; havana_transcript "OTTHUMT00000335000.2" ; hgnc_id "HGNC:8667" ; level 2 ; orig_coord_info "chr5,140882269,140884662,+" ; protein_id "ENSP00000289272.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA11--PCDHA13^ENST00000289272.3" ; transcript_name "PCDHA13-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA11--PCDHA13 HAVANA mRNA 7419 15859 . + . FI_gene_label "PCDHA13^ENSG00000239389.8" ; ID "PCDHA11--PCDHA13^ENST00000289272.3" ; Parent "PCDHA11--PCDHA13^PCDHA13^ENSG00000239389.8" ; ccdsid "CCDS4240.1" ; exon_id "ENSE00001038419.2" ; exon_number 1 ; gene_id "PCDHA11--PCDHA13^PCDHA13^ENSG00000239389.8" ; gene_name PCDHA13 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129614.4" ; havana_transcript "OTTHUMT00000335000.2" ; hgnc_id "HGNC:8667" ; level 2 ; orig_coord_info "chr5,140882269,140884662,+" ; protein_id "ENSP00000289272.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA11--PCDHA13^ENST00000289272.3" ; transcript_name "PCDHA13-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA11--PCDHA13 HAVANA gene 1001 4418 . + . FI_gene_label "PCDHA11^ENSG00000249158.7" ; ID "PCDHA11--PCDHA13^PCDHA11^ENSG00000249158.7" ; ccdsid "CCDS75326.1" ; exon_id "ENSE00003719125.1" ; exon_number 1 ; gene_id "PCDHA11--PCDHA13^PCDHA11^ENSG00000249158.7" ; gene_name PCDHA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163369.3" ; havana_transcript "OTTHUMT00000477577.1" ; hgnc_id "HGNC:8665" ; level 2 ; orig_coord_info "chr5,140869104,140871533,+" ; protein_id "ENSP00000482503.1" ; tag basic CCDS ; transcript_id "PCDHA11--PCDHA13^ENST00000616325.1" ; transcript_name "PCDHA11-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHA11--PCDHA13 HAVANA mRNA 1001 4418 . + . FI_gene_label "PCDHA11^ENSG00000249158.7" ; ID "PCDHA11--PCDHA13^ENST00000616325.1" ; Parent "PCDHA11--PCDHA13^PCDHA11^ENSG00000249158.7" ; ccdsid "CCDS75326.1" ; exon_id "ENSE00003719125.1" ; exon_number 1 ; gene_id "PCDHA11--PCDHA13^PCDHA11^ENSG00000249158.7" ; gene_name PCDHA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163369.3" ; havana_transcript "OTTHUMT00000477577.1" ; hgnc_id "HGNC:8665" ; level 2 ; orig_coord_info "chr5,140869104,140871533,+" ; protein_id "ENSP00000482503.1" ; tag basic CCDS ; transcript_id "PCDHA11--PCDHA13^ENST00000616325.1" ; transcript_name "PCDHA11-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHA11--PCDHAC1 HAVANA gene 7419 17434 . + . FI_gene_label "PCDHAC1^ENSG00000248383.5" ; ID "PCDHA11--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; ccdsid "CCDS4241.1" ; exon_id "ENSE00001085780.5" ; exon_number 1 ; gene_id "PCDHA11--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; gene_name PCDHAC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129603.3" ; havana_transcript "OTTHUMT00000251798.1" ; hgnc_id "HGNC:8676" ; level 2 ; orig_coord_info "chr5,140926893,140929325,+" ; protein_id "ENSP00000253807.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA11--PCDHAC1^ENST00000253807.3" ; transcript_name "PCDHAC1-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA11--PCDHAC1 HAVANA mRNA 7419 17434 . + . FI_gene_label "PCDHAC1^ENSG00000248383.5" ; ID "PCDHA11--PCDHAC1^ENST00000253807.3" ; Parent "PCDHA11--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; ccdsid "CCDS4241.1" ; exon_id "ENSE00001085780.5" ; exon_number 1 ; gene_id "PCDHA11--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; gene_name PCDHAC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129603.3" ; havana_transcript "OTTHUMT00000251798.1" ; hgnc_id "HGNC:8676" ; level 2 ; orig_coord_info "chr5,140926893,140929325,+" ; protein_id "ENSP00000253807.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA11--PCDHAC1^ENST00000253807.3" ; transcript_name "PCDHAC1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA11--PCDHAC1 HAVANA gene 1001 4418 . + . FI_gene_label "PCDHA11^ENSG00000249158.7" ; ID "PCDHA11--PCDHAC1^PCDHA11^ENSG00000249158.7" ; ccdsid "CCDS75326.1" ; exon_id "ENSE00003719125.1" ; exon_number 1 ; gene_id "PCDHA11--PCDHAC1^PCDHA11^ENSG00000249158.7" ; gene_name PCDHA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163369.3" ; havana_transcript "OTTHUMT00000477577.1" ; hgnc_id "HGNC:8665" ; level 2 ; orig_coord_info "chr5,140869104,140871533,+" ; protein_id "ENSP00000482503.1" ; tag basic CCDS ; transcript_id "PCDHA11--PCDHAC1^ENST00000616325.1" ; transcript_name "PCDHA11-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHA11--PCDHAC1 HAVANA mRNA 1001 4418 . + . FI_gene_label "PCDHA11^ENSG00000249158.7" ; ID "PCDHA11--PCDHAC1^ENST00000616325.1" ; Parent "PCDHA11--PCDHAC1^PCDHA11^ENSG00000249158.7" ; ccdsid "CCDS75326.1" ; exon_id "ENSE00003719125.1" ; exon_number 1 ; gene_id "PCDHA11--PCDHAC1^PCDHA11^ENSG00000249158.7" ; gene_name PCDHA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163369.3" ; havana_transcript "OTTHUMT00000477577.1" ; hgnc_id "HGNC:8665" ; level 2 ; orig_coord_info "chr5,140869104,140871533,+" ; protein_id "ENSP00000482503.1" ; tag basic CCDS ; transcript_id "PCDHA11--PCDHAC1^ENST00000616325.1" ; transcript_name "PCDHA11-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHA11--PCDHAC2 HAVANA gene 7425 18160 . + . FI_gene_label "PCDHAC2^ENSG00000243232.6" ; ID "PCDHA11--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; ccdsid "CCDS4242.1" ; exon_id "ENSE00001038414.4" ; exon_number 1 ; gene_id "PCDHA11--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; gene_name PCDHAC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129607.7" ; havana_transcript "OTTHUMT00000251802.4" ; hgnc_id "HGNC:8677" ; level 2 ; orig_coord_info "chr5,140966767,140969331,+" ; protein_id "ENSP00000289269.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA11--PCDHAC2^ENST00000289269.7" ; transcript_name "PCDHAC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA11--PCDHAC2 HAVANA mRNA 7425 18160 . + . FI_gene_label "PCDHAC2^ENSG00000243232.6" ; ID "PCDHA11--PCDHAC2^ENST00000289269.7" ; Parent "PCDHA11--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; ccdsid "CCDS4242.1" ; exon_id "ENSE00001038414.4" ; exon_number 1 ; gene_id "PCDHA11--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; gene_name PCDHAC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129607.7" ; havana_transcript "OTTHUMT00000251802.4" ; hgnc_id "HGNC:8677" ; level 2 ; orig_coord_info "chr5,140966767,140969331,+" ; protein_id "ENSP00000289269.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA11--PCDHAC2^ENST00000289269.7" ; transcript_name "PCDHAC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA11--PCDHAC2 HAVANA gene 1001 4418 . + . FI_gene_label "PCDHA11^ENSG00000249158.7" ; ID "PCDHA11--PCDHAC2^PCDHA11^ENSG00000249158.7" ; ccdsid "CCDS75326.1" ; exon_id "ENSE00003719125.1" ; exon_number 1 ; gene_id "PCDHA11--PCDHAC2^PCDHA11^ENSG00000249158.7" ; gene_name PCDHA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163369.3" ; havana_transcript "OTTHUMT00000477577.1" ; hgnc_id "HGNC:8665" ; level 2 ; orig_coord_info "chr5,140869104,140871533,+" ; protein_id "ENSP00000482503.1" ; tag basic CCDS ; transcript_id "PCDHA11--PCDHAC2^ENST00000616325.1" ; transcript_name "PCDHA11-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHA11--PCDHAC2 HAVANA mRNA 1001 4418 . + . FI_gene_label "PCDHA11^ENSG00000249158.7" ; ID "PCDHA11--PCDHAC2^ENST00000616325.1" ; Parent "PCDHA11--PCDHAC2^PCDHA11^ENSG00000249158.7" ; ccdsid "CCDS75326.1" ; exon_id "ENSE00003719125.1" ; exon_number 1 ; gene_id "PCDHA11--PCDHAC2^PCDHA11^ENSG00000249158.7" ; gene_name PCDHA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163369.3" ; havana_transcript "OTTHUMT00000477577.1" ; hgnc_id "HGNC:8665" ; level 2 ; orig_coord_info "chr5,140869104,140871533,+" ; protein_id "ENSP00000482503.1" ; tag basic CCDS ; transcript_id "PCDHA11--PCDHAC2^ENST00000616325.1" ; transcript_name "PCDHA11-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHA13--SLIT3 HAVANA gene 1001 9441 . + . FI_gene_label "PCDHA13^ENSG00000239389.8" ; ID "PCDHA13--SLIT3^PCDHA13^ENSG00000239389.8" ; ccdsid "CCDS4240.1" ; exon_id "ENSE00001038419.2" ; exon_number 1 ; gene_id "PCDHA13--SLIT3^PCDHA13^ENSG00000239389.8" ; gene_name PCDHA13 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129614.4" ; havana_transcript "OTTHUMT00000335000.2" ; hgnc_id "HGNC:8667" ; level 2 ; orig_coord_info "chr5,140882269,140884662,+" ; protein_id "ENSP00000289272.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA13--SLIT3^ENST00000289272.3" ; transcript_name "PCDHA13-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA13--SLIT3 HAVANA mRNA 1001 9441 . + . FI_gene_label "PCDHA13^ENSG00000239389.8" ; ID "PCDHA13--SLIT3^ENST00000289272.3" ; Parent "PCDHA13--SLIT3^PCDHA13^ENSG00000239389.8" ; ccdsid "CCDS4240.1" ; exon_id "ENSE00001038419.2" ; exon_number 1 ; gene_id "PCDHA13--SLIT3^PCDHA13^ENSG00000239389.8" ; gene_name PCDHA13 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129614.4" ; havana_transcript "OTTHUMT00000335000.2" ; hgnc_id "HGNC:8667" ; level 2 ; orig_coord_info "chr5,140882269,140884662,+" ; protein_id "ENSP00000289272.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA13--SLIT3^ENST00000289272.3" ; transcript_name "PCDHA13-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA13--SLIT3 HAVANA gene 12799 57589 . + . FI_gene_label "SLIT3^ENSG00000184347.15" ; ID "PCDHA13--SLIT3^SLIT3^ENSG00000184347.15" ; ccdsid "CCDS64311.1" ; exon_id "ENSE00002107713.1" ; exon_number 1 ; gene_id "PCDHA13--SLIT3^SLIT3^ENSG00000184347.15" ; gene_name SLIT3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000130409.4" ; havana_transcript "OTTHUMT00000371504.1" ; hgnc_id "HGNC:11087" ; level 2 ; orig_coord_info "chr5,169300513,169300709,-" ; protein_id "ENSP00000332164.8" ; tag basic CCDS ; transcript_id "PCDHA13--SLIT3^ENST00000332966.8" ; transcript_name "SLIT3-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA13--SLIT3 HAVANA mRNA 12799 57589 . + . FI_gene_label "SLIT3^ENSG00000184347.15" ; ID "PCDHA13--SLIT3^ENST00000332966.8" ; Parent "PCDHA13--SLIT3^SLIT3^ENSG00000184347.15" ; ccdsid "CCDS64311.1" ; exon_id "ENSE00002107713.1" ; exon_number 1 ; gene_id "PCDHA13--SLIT3^SLIT3^ENSG00000184347.15" ; gene_name SLIT3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000130409.4" ; havana_transcript "OTTHUMT00000371504.1" ; hgnc_id "HGNC:11087" ; level 2 ; orig_coord_info "chr5,169300513,169300709,-" ; protein_id "ENSP00000332164.8" ; tag basic CCDS ; transcript_id "PCDHA13--SLIT3^ENST00000332966.8" ; transcript_name "SLIT3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA4--PCDHA13 HAVANA gene 14666 23106 . + . FI_gene_label "PCDHA13^ENSG00000239389.8" ; ID "PCDHA4--PCDHA13^PCDHA13^ENSG00000239389.8" ; ccdsid "CCDS4240.1" ; exon_id "ENSE00001038419.2" ; exon_number 1 ; gene_id "PCDHA4--PCDHA13^PCDHA13^ENSG00000239389.8" ; gene_name PCDHA13 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129614.4" ; havana_transcript "OTTHUMT00000335000.2" ; hgnc_id "HGNC:8667" ; level 2 ; orig_coord_info "chr5,140882269,140884662,+" ; protein_id "ENSP00000289272.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA4--PCDHA13^ENST00000289272.3" ; transcript_name "PCDHA13-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA4--PCDHA13 HAVANA mRNA 14666 23106 . + . FI_gene_label "PCDHA13^ENSG00000239389.8" ; ID "PCDHA4--PCDHA13^ENST00000289272.3" ; Parent "PCDHA4--PCDHA13^PCDHA13^ENSG00000239389.8" ; ccdsid "CCDS4240.1" ; exon_id "ENSE00001038419.2" ; exon_number 1 ; gene_id "PCDHA4--PCDHA13^PCDHA13^ENSG00000239389.8" ; gene_name PCDHA13 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129614.4" ; havana_transcript "OTTHUMT00000335000.2" ; hgnc_id "HGNC:8667" ; level 2 ; orig_coord_info "chr5,140882269,140884662,+" ; protein_id "ENSP00000289272.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA4--PCDHA13^ENST00000289272.3" ; transcript_name "PCDHA13-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA4--PCDHA13 ENSEMBL gene 1001 3590 . + . FI_gene_label "PCDHA4^ENSG00000204967.12" ; ID "PCDHA4--PCDHA13^PCDHA4^ENSG00000204967.12" ; exon_id "ENSE00003735925.1" ; exon_number 1 ; gene_id "PCDHA4--PCDHA13^PCDHA4^ENSG00000204967.12" ; gene_name PCDHA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163360.5" ; hgnc_id "HGNC:8670" ; level 3 ; orig_coord_info "chr5,140806929,140806945,+" ; protein_id "ENSP00000367365.4" ; tag basic ; transcript_id "PCDHA4--PCDHA13^ENST00000378125.4" ; transcript_name "PCDHA4-201" ; transcript_support_level 5 ; transcript_type protein_coding
PCDHA4--PCDHA13 ENSEMBL mRNA 1001 3590 . + . FI_gene_label "PCDHA4^ENSG00000204967.12" ; ID "PCDHA4--PCDHA13^ENST00000378125.4" ; Parent "PCDHA4--PCDHA13^PCDHA4^ENSG00000204967.12" ; exon_id "ENSE00003735925.1" ; exon_number 1 ; gene_id "PCDHA4--PCDHA13^PCDHA4^ENSG00000204967.12" ; gene_name PCDHA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163360.5" ; hgnc_id "HGNC:8670" ; level 3 ; orig_coord_info "chr5,140806929,140806945,+" ; protein_id "ENSP00000367365.4" ; tag basic ; transcript_id "PCDHA4--PCDHA13^ENST00000378125.4" ; transcript_name "PCDHA4-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
PCDHA4--PCDHAC1 HAVANA gene 14666 24681 . + . FI_gene_label "PCDHAC1^ENSG00000248383.5" ; ID "PCDHA4--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; ccdsid "CCDS4241.1" ; exon_id "ENSE00001085780.5" ; exon_number 1 ; gene_id "PCDHA4--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; gene_name PCDHAC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129603.3" ; havana_transcript "OTTHUMT00000251798.1" ; hgnc_id "HGNC:8676" ; level 2 ; orig_coord_info "chr5,140926893,140929325,+" ; protein_id "ENSP00000253807.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA4--PCDHAC1^ENST00000253807.3" ; transcript_name "PCDHAC1-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA4--PCDHAC1 HAVANA mRNA 14666 24681 . + . FI_gene_label "PCDHAC1^ENSG00000248383.5" ; ID "PCDHA4--PCDHAC1^ENST00000253807.3" ; Parent "PCDHA4--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; ccdsid "CCDS4241.1" ; exon_id "ENSE00001085780.5" ; exon_number 1 ; gene_id "PCDHA4--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; gene_name PCDHAC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129603.3" ; havana_transcript "OTTHUMT00000251798.1" ; hgnc_id "HGNC:8676" ; level 2 ; orig_coord_info "chr5,140926893,140929325,+" ; protein_id "ENSP00000253807.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA4--PCDHAC1^ENST00000253807.3" ; transcript_name "PCDHAC1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA4--PCDHAC1 ENSEMBL gene 1001 3590 . + . FI_gene_label "PCDHA4^ENSG00000204967.12" ; ID "PCDHA4--PCDHAC1^PCDHA4^ENSG00000204967.12" ; exon_id "ENSE00003735925.1" ; exon_number 1 ; gene_id "PCDHA4--PCDHAC1^PCDHA4^ENSG00000204967.12" ; gene_name PCDHA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163360.5" ; hgnc_id "HGNC:8670" ; level 3 ; orig_coord_info "chr5,140806929,140806945,+" ; protein_id "ENSP00000367365.4" ; tag basic ; transcript_id "PCDHA4--PCDHAC1^ENST00000378125.4" ; transcript_name "PCDHA4-201" ; transcript_support_level 5 ; transcript_type protein_coding
PCDHA4--PCDHAC1 ENSEMBL mRNA 1001 3590 . + . FI_gene_label "PCDHA4^ENSG00000204967.12" ; ID "PCDHA4--PCDHAC1^ENST00000378125.4" ; Parent "PCDHA4--PCDHAC1^PCDHA4^ENSG00000204967.12" ; exon_id "ENSE00003735925.1" ; exon_number 1 ; gene_id "PCDHA4--PCDHAC1^PCDHA4^ENSG00000204967.12" ; gene_name PCDHA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163360.5" ; hgnc_id "HGNC:8670" ; level 3 ; orig_coord_info "chr5,140806929,140806945,+" ; protein_id "ENSP00000367365.4" ; tag basic ; transcript_id "PCDHA4--PCDHAC1^ENST00000378125.4" ; transcript_name "PCDHA4-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
PCDHA4--PCDHAC2 HAVANA gene 14672 25407 . + . FI_gene_label "PCDHAC2^ENSG00000243232.6" ; ID "PCDHA4--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; ccdsid "CCDS4242.1" ; exon_id "ENSE00001038414.4" ; exon_number 1 ; gene_id "PCDHA4--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; gene_name PCDHAC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129607.7" ; havana_transcript "OTTHUMT00000251802.4" ; hgnc_id "HGNC:8677" ; level 2 ; orig_coord_info "chr5,140966767,140969331,+" ; protein_id "ENSP00000289269.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA4--PCDHAC2^ENST00000289269.7" ; transcript_name "PCDHAC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA4--PCDHAC2 HAVANA mRNA 14672 25407 . + . FI_gene_label "PCDHAC2^ENSG00000243232.6" ; ID "PCDHA4--PCDHAC2^ENST00000289269.7" ; Parent "PCDHA4--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; ccdsid "CCDS4242.1" ; exon_id "ENSE00001038414.4" ; exon_number 1 ; gene_id "PCDHA4--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; gene_name PCDHAC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129607.7" ; havana_transcript "OTTHUMT00000251802.4" ; hgnc_id "HGNC:8677" ; level 2 ; orig_coord_info "chr5,140966767,140969331,+" ; protein_id "ENSP00000289269.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA4--PCDHAC2^ENST00000289269.7" ; transcript_name "PCDHAC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA4--PCDHAC2 ENSEMBL gene 1001 3590 . + . FI_gene_label "PCDHA4^ENSG00000204967.12" ; ID "PCDHA4--PCDHAC2^PCDHA4^ENSG00000204967.12" ; exon_id "ENSE00003735925.1" ; exon_number 1 ; gene_id "PCDHA4--PCDHAC2^PCDHA4^ENSG00000204967.12" ; gene_name PCDHA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163360.5" ; hgnc_id "HGNC:8670" ; level 3 ; orig_coord_info "chr5,140806929,140806945,+" ; protein_id "ENSP00000367365.4" ; tag basic ; transcript_id "PCDHA4--PCDHAC2^ENST00000378125.4" ; transcript_name "PCDHA4-201" ; transcript_support_level 5 ; transcript_type protein_coding
PCDHA4--PCDHAC2 ENSEMBL mRNA 1001 3590 . + . FI_gene_label "PCDHA4^ENSG00000204967.12" ; ID "PCDHA4--PCDHAC2^ENST00000378125.4" ; Parent "PCDHA4--PCDHAC2^PCDHA4^ENSG00000204967.12" ; exon_id "ENSE00003735925.1" ; exon_number 1 ; gene_id "PCDHA4--PCDHAC2^PCDHA4^ENSG00000204967.12" ; gene_name PCDHA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163360.5" ; hgnc_id "HGNC:8670" ; level 3 ; orig_coord_info "chr5,140806929,140806945,+" ; protein_id "ENSP00000367365.4" ; tag basic ; transcript_id "PCDHA4--PCDHAC2^ENST00000378125.4" ; transcript_name "PCDHA4-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
PCDHA6--PCDHA13 HAVANA gene 7268 15708 . + . FI_gene_label "PCDHA13^ENSG00000239389.8" ; ID "PCDHA6--PCDHA13^PCDHA13^ENSG00000239389.8" ; ccdsid "CCDS4240.1" ; exon_id "ENSE00001038419.2" ; exon_number 1 ; gene_id "PCDHA6--PCDHA13^PCDHA13^ENSG00000239389.8" ; gene_name PCDHA13 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129614.4" ; havana_transcript "OTTHUMT00000335000.2" ; hgnc_id "HGNC:8667" ; level 2 ; orig_coord_info "chr5,140882269,140884662,+" ; protein_id "ENSP00000289272.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA6--PCDHA13^ENST00000289272.3" ; transcript_name "PCDHA13-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA6--PCDHA13 HAVANA mRNA 7268 15708 . + . FI_gene_label "PCDHA13^ENSG00000239389.8" ; ID "PCDHA6--PCDHA13^ENST00000289272.3" ; Parent "PCDHA6--PCDHA13^PCDHA13^ENSG00000239389.8" ; ccdsid "CCDS4240.1" ; exon_id "ENSE00001038419.2" ; exon_number 1 ; gene_id "PCDHA6--PCDHA13^PCDHA13^ENSG00000239389.8" ; gene_name PCDHA13 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129614.4" ; havana_transcript "OTTHUMT00000335000.2" ; hgnc_id "HGNC:8667" ; level 2 ; orig_coord_info "chr5,140882269,140884662,+" ; protein_id "ENSP00000289272.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA6--PCDHA13^ENST00000289272.3" ; transcript_name "PCDHA13-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA6--PCDHA13 HAVANA gene 1001 4267 . + . FI_gene_label "PCDHA6^ENSG00000081842.18" ; ID "PCDHA6--PCDHA13^PCDHA6^ENSG00000081842.18" ; exon_id "ENSE00001476364.4" ; exon_number 1 ; gene_id "PCDHA6--PCDHA13^PCDHA6^ENSG00000081842.18" ; gene_name PCDHA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163353.5" ; havana_transcript "OTTHUMT00000477550.1" ; hgnc_id "HGNC:8672" ; level 2 ; orig_coord_info "chr5,140828092,140830500,+" ; protein_id "ENSP00000367366.4" ; tag upstream_ATG RNA_Seq_supported_partial basic ; transcript_id "PCDHA6--PCDHA13^ENST00000378126.4" ; transcript_name "PCDHA6-201" ; transcript_support_level NA ; transcript_type protein_coding
PCDHA6--PCDHA13 HAVANA mRNA 1001 4267 . + . FI_gene_label "PCDHA6^ENSG00000081842.18" ; ID "PCDHA6--PCDHA13^ENST00000378126.4" ; Parent "PCDHA6--PCDHA13^PCDHA6^ENSG00000081842.18" ; exon_id "ENSE00001476364.4" ; exon_number 1 ; gene_id "PCDHA6--PCDHA13^PCDHA6^ENSG00000081842.18" ; gene_name PCDHA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163353.5" ; havana_transcript "OTTHUMT00000477550.1" ; hgnc_id "HGNC:8672" ; level 2 ; orig_coord_info "chr5,140828092,140830500,+" ; protein_id "ENSP00000367366.4" ; tag upstream_ATG RNA_Seq_supported_partial basic ; transcript_id "PCDHA6--PCDHA13^ENST00000378126.4" ; transcript_name "PCDHA6-201" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHA6--PCDHAC1 HAVANA gene 7268 17283 . + . FI_gene_label "PCDHAC1^ENSG00000248383.5" ; ID "PCDHA6--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; ccdsid "CCDS4241.1" ; exon_id "ENSE00001085780.5" ; exon_number 1 ; gene_id "PCDHA6--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; gene_name PCDHAC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129603.3" ; havana_transcript "OTTHUMT00000251798.1" ; hgnc_id "HGNC:8676" ; level 2 ; orig_coord_info "chr5,140926893,140929325,+" ; protein_id "ENSP00000253807.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA6--PCDHAC1^ENST00000253807.3" ; transcript_name "PCDHAC1-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA6--PCDHAC1 HAVANA mRNA 7268 17283 . + . FI_gene_label "PCDHAC1^ENSG00000248383.5" ; ID "PCDHA6--PCDHAC1^ENST00000253807.3" ; Parent "PCDHA6--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; ccdsid "CCDS4241.1" ; exon_id "ENSE00001085780.5" ; exon_number 1 ; gene_id "PCDHA6--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; gene_name PCDHAC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129603.3" ; havana_transcript "OTTHUMT00000251798.1" ; hgnc_id "HGNC:8676" ; level 2 ; orig_coord_info "chr5,140926893,140929325,+" ; protein_id "ENSP00000253807.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA6--PCDHAC1^ENST00000253807.3" ; transcript_name "PCDHAC1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA6--PCDHAC1 HAVANA gene 1001 4267 . + . FI_gene_label "PCDHA6^ENSG00000081842.18" ; ID "PCDHA6--PCDHAC1^PCDHA6^ENSG00000081842.18" ; exon_id "ENSE00001476364.4" ; exon_number 1 ; gene_id "PCDHA6--PCDHAC1^PCDHA6^ENSG00000081842.18" ; gene_name PCDHA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163353.5" ; havana_transcript "OTTHUMT00000477550.1" ; hgnc_id "HGNC:8672" ; level 2 ; orig_coord_info "chr5,140828092,140830500,+" ; protein_id "ENSP00000367366.4" ; tag upstream_ATG RNA_Seq_supported_partial basic ; transcript_id "PCDHA6--PCDHAC1^ENST00000378126.4" ; transcript_name "PCDHA6-201" ; transcript_support_level NA ; transcript_type protein_coding
PCDHA6--PCDHAC1 HAVANA mRNA 1001 4267 . + . FI_gene_label "PCDHA6^ENSG00000081842.18" ; ID "PCDHA6--PCDHAC1^ENST00000378126.4" ; Parent "PCDHA6--PCDHAC1^PCDHA6^ENSG00000081842.18" ; exon_id "ENSE00001476364.4" ; exon_number 1 ; gene_id "PCDHA6--PCDHAC1^PCDHA6^ENSG00000081842.18" ; gene_name PCDHA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163353.5" ; havana_transcript "OTTHUMT00000477550.1" ; hgnc_id "HGNC:8672" ; level 2 ; orig_coord_info "chr5,140828092,140830500,+" ; protein_id "ENSP00000367366.4" ; tag upstream_ATG RNA_Seq_supported_partial basic ; transcript_id "PCDHA6--PCDHAC1^ENST00000378126.4" ; transcript_name "PCDHA6-201" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHA6--PCDHAC2 HAVANA gene 7274 18009 . + . FI_gene_label "PCDHAC2^ENSG00000243232.6" ; ID "PCDHA6--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; ccdsid "CCDS4242.1" ; exon_id "ENSE00001038414.4" ; exon_number 1 ; gene_id "PCDHA6--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; gene_name PCDHAC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129607.7" ; havana_transcript "OTTHUMT00000251802.4" ; hgnc_id "HGNC:8677" ; level 2 ; orig_coord_info "chr5,140966767,140969331,+" ; protein_id "ENSP00000289269.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA6--PCDHAC2^ENST00000289269.7" ; transcript_name "PCDHAC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA6--PCDHAC2 HAVANA mRNA 7274 18009 . + . FI_gene_label "PCDHAC2^ENSG00000243232.6" ; ID "PCDHA6--PCDHAC2^ENST00000289269.7" ; Parent "PCDHA6--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; ccdsid "CCDS4242.1" ; exon_id "ENSE00001038414.4" ; exon_number 1 ; gene_id "PCDHA6--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; gene_name PCDHAC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129607.7" ; havana_transcript "OTTHUMT00000251802.4" ; hgnc_id "HGNC:8677" ; level 2 ; orig_coord_info "chr5,140966767,140969331,+" ; protein_id "ENSP00000289269.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA6--PCDHAC2^ENST00000289269.7" ; transcript_name "PCDHAC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA6--PCDHAC2 HAVANA gene 1001 4267 . + . FI_gene_label "PCDHA6^ENSG00000081842.18" ; ID "PCDHA6--PCDHAC2^PCDHA6^ENSG00000081842.18" ; exon_id "ENSE00001476364.4" ; exon_number 1 ; gene_id "PCDHA6--PCDHAC2^PCDHA6^ENSG00000081842.18" ; gene_name PCDHA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163353.5" ; havana_transcript "OTTHUMT00000477550.1" ; hgnc_id "HGNC:8672" ; level 2 ; orig_coord_info "chr5,140828092,140830500,+" ; protein_id "ENSP00000367366.4" ; tag upstream_ATG RNA_Seq_supported_partial basic ; transcript_id "PCDHA6--PCDHAC2^ENST00000378126.4" ; transcript_name "PCDHA6-201" ; transcript_support_level NA ; transcript_type protein_coding
PCDHA6--PCDHAC2 HAVANA mRNA 1001 4267 . + . FI_gene_label "PCDHA6^ENSG00000081842.18" ; ID "PCDHA6--PCDHAC2^ENST00000378126.4" ; Parent "PCDHA6--PCDHAC2^PCDHA6^ENSG00000081842.18" ; exon_id "ENSE00001476364.4" ; exon_number 1 ; gene_id "PCDHA6--PCDHAC2^PCDHA6^ENSG00000081842.18" ; gene_name PCDHA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163353.5" ; havana_transcript "OTTHUMT00000477550.1" ; hgnc_id "HGNC:8672" ; level 2 ; orig_coord_info "chr5,140828092,140830500,+" ; protein_id "ENSP00000367366.4" ; tag upstream_ATG RNA_Seq_supported_partial basic ; transcript_id "PCDHA6--PCDHAC2^ENST00000378126.4" ; transcript_name "PCDHA6-201" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHAC1--SLIT3 HAVANA gene 1001 11016 . + . FI_gene_label "PCDHAC1^ENSG00000248383.5" ; ID "PCDHAC1--SLIT3^PCDHAC1^ENSG00000248383.5" ; ccdsid "CCDS4241.1" ; exon_id "ENSE00001085780.5" ; exon_number 1 ; gene_id "PCDHAC1--SLIT3^PCDHAC1^ENSG00000248383.5" ; gene_name PCDHAC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129603.3" ; havana_transcript "OTTHUMT00000251798.1" ; hgnc_id "HGNC:8676" ; level 2 ; orig_coord_info "chr5,140926893,140929325,+" ; protein_id "ENSP00000253807.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHAC1--SLIT3^ENST00000253807.3" ; transcript_name "PCDHAC1-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHAC1--SLIT3 HAVANA mRNA 1001 11016 . + . FI_gene_label "PCDHAC1^ENSG00000248383.5" ; ID "PCDHAC1--SLIT3^ENST00000253807.3" ; Parent "PCDHAC1--SLIT3^PCDHAC1^ENSG00000248383.5" ; ccdsid "CCDS4241.1" ; exon_id "ENSE00001085780.5" ; exon_number 1 ; gene_id "PCDHAC1--SLIT3^PCDHAC1^ENSG00000248383.5" ; gene_name PCDHAC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129603.3" ; havana_transcript "OTTHUMT00000251798.1" ; hgnc_id "HGNC:8676" ; level 2 ; orig_coord_info "chr5,140926893,140929325,+" ; protein_id "ENSP00000253807.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHAC1--SLIT3^ENST00000253807.3" ; transcript_name "PCDHAC1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHAC1--SLIT3 HAVANA gene 14374 59164 . + . FI_gene_label "SLIT3^ENSG00000184347.15" ; ID "PCDHAC1--SLIT3^SLIT3^ENSG00000184347.15" ; ccdsid "CCDS64311.1" ; exon_id "ENSE00002107713.1" ; exon_number 1 ; gene_id "PCDHAC1--SLIT3^SLIT3^ENSG00000184347.15" ; gene_name SLIT3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000130409.4" ; havana_transcript "OTTHUMT00000371504.1" ; hgnc_id "HGNC:11087" ; level 2 ; orig_coord_info "chr5,169300513,169300709,-" ; protein_id "ENSP00000332164.8" ; tag basic CCDS ; transcript_id "PCDHAC1--SLIT3^ENST00000332966.8" ; transcript_name "SLIT3-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHAC1--SLIT3 HAVANA mRNA 14374 59164 . + . FI_gene_label "SLIT3^ENSG00000184347.15" ; ID "PCDHAC1--SLIT3^ENST00000332966.8" ; Parent "PCDHAC1--SLIT3^SLIT3^ENSG00000184347.15" ; ccdsid "CCDS64311.1" ; exon_id "ENSE00002107713.1" ; exon_number 1 ; gene_id "PCDHAC1--SLIT3^SLIT3^ENSG00000184347.15" ; gene_name SLIT3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000130409.4" ; havana_transcript "OTTHUMT00000371504.1" ; hgnc_id "HGNC:11087" ; level 2 ; orig_coord_info "chr5,169300513,169300709,-" ; protein_id "ENSP00000332164.8" ; tag basic CCDS ; transcript_id "PCDHAC1--SLIT3^ENST00000332966.8" ; transcript_name "SLIT3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHAC2--SLIT3 HAVANA gene 1007 11742 . + . FI_gene_label "PCDHAC2^ENSG00000243232.6" ; ID "PCDHAC2--SLIT3^PCDHAC2^ENSG00000243232.6" ; ccdsid "CCDS4242.1" ; exon_id "ENSE00001038414.4" ; exon_number 1 ; gene_id "PCDHAC2--SLIT3^PCDHAC2^ENSG00000243232.6" ; gene_name PCDHAC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129607.7" ; havana_transcript "OTTHUMT00000251802.4" ; hgnc_id "HGNC:8677" ; level 2 ; orig_coord_info "chr5,140966767,140969331,+" ; protein_id "ENSP00000289269.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHAC2--SLIT3^ENST00000289269.7" ; transcript_name "PCDHAC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHAC2--SLIT3 HAVANA mRNA 1007 11742 . + . FI_gene_label "PCDHAC2^ENSG00000243232.6" ; ID "PCDHAC2--SLIT3^ENST00000289269.7" ; Parent "PCDHAC2--SLIT3^PCDHAC2^ENSG00000243232.6" ; ccdsid "CCDS4242.1" ; exon_id "ENSE00001038414.4" ; exon_number 1 ; gene_id "PCDHAC2--SLIT3^PCDHAC2^ENSG00000243232.6" ; gene_name PCDHAC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129607.7" ; havana_transcript "OTTHUMT00000251802.4" ; hgnc_id "HGNC:8677" ; level 2 ; orig_coord_info "chr5,140966767,140969331,+" ; protein_id "ENSP00000289269.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHAC2--SLIT3^ENST00000289269.7" ; transcript_name "PCDHAC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHAC2--SLIT3 HAVANA gene 15100 59890 . + . FI_gene_label "SLIT3^ENSG00000184347.15" ; ID "PCDHAC2--SLIT3^SLIT3^ENSG00000184347.15" ; ccdsid "CCDS64311.1" ; exon_id "ENSE00002107713.1" ; exon_number 1 ; gene_id "PCDHAC2--SLIT3^SLIT3^ENSG00000184347.15" ; gene_name SLIT3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000130409.4" ; havana_transcript "OTTHUMT00000371504.1" ; hgnc_id "HGNC:11087" ; level 2 ; orig_coord_info "chr5,169300513,169300709,-" ; protein_id "ENSP00000332164.8" ; tag basic CCDS ; transcript_id "PCDHAC2--SLIT3^ENST00000332966.8" ; transcript_name "SLIT3-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHAC2--SLIT3 HAVANA mRNA 15100 59890 . + . FI_gene_label "SLIT3^ENSG00000184347.15" ; ID "PCDHAC2--SLIT3^ENST00000332966.8" ; Parent "PCDHAC2--SLIT3^SLIT3^ENSG00000184347.15" ; ccdsid "CCDS64311.1" ; exon_id "ENSE00002107713.1" ; exon_number 1 ; gene_id "PCDHAC2--SLIT3^SLIT3^ENSG00000184347.15" ; gene_name SLIT3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000130409.4" ; havana_transcript "OTTHUMT00000371504.1" ; hgnc_id "HGNC:11087" ; level 2 ; orig_coord_info "chr5,169300513,169300709,-" ; protein_id "ENSP00000332164.8" ; tag basic CCDS ; transcript_id "PCDHAC2--SLIT3^ENST00000332966.8" ; transcript_name "SLIT3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGA10 HAVANA gene 6881 16334 . + . FI_gene_label "PCDHGA10^ENSG00000253846.2" ; ID "PCDHGA4--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; ccdsid "CCDS47292.1" ; exon_id "ENSE00001792208.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; gene_name PCDHGA10 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163688.2" ; havana_transcript "OTTHUMT00000374747.1" ; hgnc_id "HGNC:8697" ; level 2 ; orig_coord_info "chr5,141413176,141415611,+" ; protein_id "ENSP00000381611.2" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGA10^ENST00000398610.2" ; transcript_name "PCDHGA10-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA4--PCDHGA10 HAVANA mRNA 6881 16334 . + . FI_gene_label "PCDHGA10^ENSG00000253846.2" ; ID "PCDHGA4--PCDHGA10^ENST00000398610.2" ; Parent "PCDHGA4--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; ccdsid "CCDS47292.1" ; exon_id "ENSE00001792208.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; gene_name PCDHGA10 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163688.2" ; havana_transcript "OTTHUMT00000374747.1" ; hgnc_id "HGNC:8697" ; level 2 ; orig_coord_info "chr5,141413176,141415611,+" ; protein_id "ENSP00000381611.2" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGA10^ENST00000398610.2" ; transcript_name "PCDHGA10-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGA10 HAVANA gene 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGA10^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA10^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGA10^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA4--PCDHGA10 HAVANA mRNA 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGA10^ENST00000612927.1" ; Parent "PCDHGA4--PCDHGA10^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA10^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGA10^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGA11 HAVANA gene 6696 15501 . + . FI_gene_label "PCDHGA11^ENSG00000253873.6" ; ID "PCDHGA4--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; ccdsid "CCDS47294.1" ; exon_id "ENSE00001533810.3" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; gene_name PCDHGA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164055.3" ; havana_transcript "OTTHUMT00000376974.3" ; hgnc_id "HGNC:8698" ; level 2 ; orig_coord_info "chr5,141421228,141423660,+" ; protein_id "ENSP00000381589.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGA11^ENST00000398587.7" ; transcript_name "PCDHGA11-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA4--PCDHGA11 HAVANA mRNA 6696 15501 . + . FI_gene_label "PCDHGA11^ENSG00000253873.6" ; ID "PCDHGA4--PCDHGA11^ENST00000398587.7" ; Parent "PCDHGA4--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; ccdsid "CCDS47294.1" ; exon_id "ENSE00001533810.3" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; gene_name PCDHGA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164055.3" ; havana_transcript "OTTHUMT00000376974.3" ; hgnc_id "HGNC:8698" ; level 2 ; orig_coord_info "chr5,141421228,141423660,+" ; protein_id "ENSP00000381589.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGA11^ENST00000398587.7" ; transcript_name "PCDHGA11-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGA11 HAVANA gene 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGA11^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA11^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGA11^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA4--PCDHGA11 HAVANA mRNA 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGA11^ENST00000612927.1" ; Parent "PCDHGA4--PCDHGA11^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA11^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGA11^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGA12 HAVANA gene 6692 14584 . + . FI_gene_label "PCDHGA12^ENSG00000253159.3" ; ID "PCDHGA4--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; ccdsid "CCDS4260.1" ; exon_id "ENSE00000814269.5" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; gene_name PCDHGA12 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129611.6" ; havana_transcript "OTTHUMT00000251806.3" ; hgnc_id "HGNC:8699" ; level 2 ; orig_coord_info "chr5,141430760,141433183,+" ; protein_id "ENSP00000252085.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGA12^ENST00000252085.4" ; transcript_name "PCDHGA12-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA4--PCDHGA12 HAVANA mRNA 6692 14584 . + . FI_gene_label "PCDHGA12^ENSG00000253159.3" ; ID "PCDHGA4--PCDHGA12^ENST00000252085.4" ; Parent "PCDHGA4--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; ccdsid "CCDS4260.1" ; exon_id "ENSE00000814269.5" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; gene_name PCDHGA12 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129611.6" ; havana_transcript "OTTHUMT00000251806.3" ; hgnc_id "HGNC:8699" ; level 2 ; orig_coord_info "chr5,141430760,141433183,+" ; protein_id "ENSP00000252085.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGA12^ENST00000252085.4" ; transcript_name "PCDHGA12-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGA12 HAVANA gene 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGA12^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA12^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGA12^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA4--PCDHGA12 HAVANA mRNA 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGA12^ENST00000612927.1" ; Parent "PCDHGA4--PCDHGA12^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA12^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGA12^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGA8 HAVANA gene 9168 18348 . + . FI_gene_label "PCDHGA8^ENSG00000253767.3" ; ID "PCDHGA4--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; ccdsid "CCDS47291.1" ; exon_id "ENSE00001533882.3" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; gene_name PCDHGA8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164053.2" ; havana_transcript "OTTHUMT00000376972.1" ; hgnc_id "HGNC:8706" ; level 2 ; orig_coord_info "chr5,141392814,141395237,+" ; protein_id "ENSP00000381605.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGA8^ENST00000398604.3" ; transcript_name "PCDHGA8-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA4--PCDHGA8 HAVANA mRNA 9168 18348 . + . FI_gene_label "PCDHGA8^ENSG00000253767.3" ; ID "PCDHGA4--PCDHGA8^ENST00000398604.3" ; Parent "PCDHGA4--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; ccdsid "CCDS47291.1" ; exon_id "ENSE00001533882.3" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; gene_name PCDHGA8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164053.2" ; havana_transcript "OTTHUMT00000376972.1" ; hgnc_id "HGNC:8706" ; level 2 ; orig_coord_info "chr5,141392814,141395237,+" ; protein_id "ENSP00000381605.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGA8^ENST00000398604.3" ; transcript_name "PCDHGA8-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGA8 HAVANA gene 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGA8^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA8^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGA8^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA4--PCDHGA8 HAVANA mRNA 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGA8^ENST00000612927.1" ; Parent "PCDHGA4--PCDHGA8^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA8^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGA8^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGA9 HAVANA gene 6713 14440 . + . FI_gene_label "PCDHGA9^ENSG00000261934.2" ; ID "PCDHGA4--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; ccdsid "CCDS58981.1" ; exon_id "ENSE00002639131.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; gene_name PCDHGA9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177473.2" ; havana_transcript "OTTHUMT00000437105.1" ; hgnc_id "HGNC:8707" ; level 2 ; orig_coord_info "chr5,141402953,141405376,+" ; protein_id "ENSP00000460274.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGA9^ENST00000573521.1" ; transcript_name "PCDHGA9-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA4--PCDHGA9 HAVANA mRNA 6713 14440 . + . FI_gene_label "PCDHGA9^ENSG00000261934.2" ; ID "PCDHGA4--PCDHGA9^ENST00000573521.1" ; Parent "PCDHGA4--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; ccdsid "CCDS58981.1" ; exon_id "ENSE00002639131.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; gene_name PCDHGA9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177473.2" ; havana_transcript "OTTHUMT00000437105.1" ; hgnc_id "HGNC:8707" ; level 2 ; orig_coord_info "chr5,141402953,141405376,+" ; protein_id "ENSP00000460274.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGA9^ENST00000573521.1" ; transcript_name "PCDHGA9-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGA9 HAVANA gene 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGA9^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA9^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGA9^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA4--PCDHGA9 HAVANA mRNA 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGA9^ENST00000612927.1" ; Parent "PCDHGA4--PCDHGA9^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGA9^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGA9^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGB6 HAVANA gene 6874 16473 . + . FI_gene_label "PCDHGB6^ENSG00000253305.2" ; ID "PCDHGA4--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; ccdsid "CCDS54929.1" ; exon_id "ENSE00002122685.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; gene_name PCDHGB6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163687.2" ; havana_transcript "OTTHUMT00000374746.1" ; hgnc_id "HGNC:8713" ; level 2 ; orig_coord_info "chr5,141408203,141410620,+" ; protein_id "ENSP00000428603.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGB6^ENST00000520790.1" ; transcript_name "PCDHGB6-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA4--PCDHGB6 HAVANA mRNA 6874 16473 . + . FI_gene_label "PCDHGB6^ENSG00000253305.2" ; ID "PCDHGA4--PCDHGB6^ENST00000520790.1" ; Parent "PCDHGA4--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; ccdsid "CCDS54929.1" ; exon_id "ENSE00002122685.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; gene_name PCDHGB6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163687.2" ; havana_transcript "OTTHUMT00000374746.1" ; hgnc_id "HGNC:8713" ; level 2 ; orig_coord_info "chr5,141408203,141410620,+" ; protein_id "ENSP00000428603.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGB6^ENST00000520790.1" ; transcript_name "PCDHGB6-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGB6 HAVANA gene 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGB6^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGB6^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGB6^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA4--PCDHGB6 HAVANA mRNA 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGB6^ENST00000612927.1" ; Parent "PCDHGA4--PCDHGB6^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGB6^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGB6^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGB7 HAVANA gene 6724 14653 . + . FI_gene_label "PCDHGB7^ENSG00000254122.3" ; ID "PCDHGA4--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; ccdsid "CCDS47293.1" ; exon_id "ENSE00001533845.4" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; gene_name PCDHGB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164054.2" ; havana_transcript "OTTHUMT00000376973.2" ; hgnc_id "HGNC:8714" ; level 2 ; orig_coord_info "chr5,141417860,141420274,+" ; protein_id "ENSP00000381594.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGB7^ENST00000398594.4" ; transcript_name "PCDHGB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA4--PCDHGB7 HAVANA mRNA 6724 14653 . + . FI_gene_label "PCDHGB7^ENSG00000254122.3" ; ID "PCDHGA4--PCDHGB7^ENST00000398594.4" ; Parent "PCDHGA4--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; ccdsid "CCDS47293.1" ; exon_id "ENSE00001533845.4" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; gene_name PCDHGB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164054.2" ; havana_transcript "OTTHUMT00000376973.2" ; hgnc_id "HGNC:8714" ; level 2 ; orig_coord_info "chr5,141417860,141420274,+" ; protein_id "ENSP00000381594.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGB7^ENST00000398594.4" ; transcript_name "PCDHGB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGB7 HAVANA gene 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGB7^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGB7^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGB7^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA4--PCDHGB7 HAVANA mRNA 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGB7^ENST00000612927.1" ; Parent "PCDHGA4--PCDHGB7^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGB7^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGB7^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGC3 HAVANA gene 6711 16897 . + . FI_gene_label "PCDHGC3^ENSG00000240184.7" ; ID "PCDHGA4--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; ccdsid "CCDS4261.1" ; exon_id "ENSE00001199459.7" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; gene_name PCDHGC3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129613.8" ; havana_transcript "OTTHUMT00000251808.5" ; hgnc_id "HGNC:8716" ; level 2 ; orig_coord_info "chr5,141476117,141478546,+" ; protein_id "ENSP00000312070.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGC3^ENST00000308177.5" ; transcript_name "PCDHGC3-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA4--PCDHGC3 HAVANA mRNA 6711 16897 . + . FI_gene_label "PCDHGC3^ENSG00000240184.7" ; ID "PCDHGA4--PCDHGC3^ENST00000308177.5" ; Parent "PCDHGA4--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; ccdsid "CCDS4261.1" ; exon_id "ENSE00001199459.7" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; gene_name PCDHGC3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129613.8" ; havana_transcript "OTTHUMT00000251808.5" ; hgnc_id "HGNC:8716" ; level 2 ; orig_coord_info "chr5,141476117,141478546,+" ; protein_id "ENSP00000312070.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGC3^ENST00000308177.5" ; transcript_name "PCDHGC3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGC3 HAVANA gene 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGC3^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGC3^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGC3^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA4--PCDHGC3 HAVANA mRNA 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGC3^ENST00000612927.1" ; Parent "PCDHGA4--PCDHGC3^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGC3^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGC3^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGC4 HAVANA gene 6869 14665 . + . FI_gene_label "PCDHGC4^ENSG00000242419.5" ; ID "PCDHGA4--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; ccdsid "CCDS4262.1" ; exon_id "ENSE00001162305.2" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; gene_name PCDHGC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129625.4" ; havana_transcript "OTTHUMT00000251820.2" ; hgnc_id "HGNC:8717" ; level 2 ; orig_coord_info "chr5,141485174,141487615,+" ; protein_id "ENSP00000306918.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGC4^ENST00000306593.1" ; transcript_name "PCDHGC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA4--PCDHGC4 HAVANA mRNA 6869 14665 . + . FI_gene_label "PCDHGC4^ENSG00000242419.5" ; ID "PCDHGA4--PCDHGC4^ENST00000306593.1" ; Parent "PCDHGA4--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; ccdsid "CCDS4262.1" ; exon_id "ENSE00001162305.2" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; gene_name PCDHGC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129625.4" ; havana_transcript "OTTHUMT00000251820.2" ; hgnc_id "HGNC:8717" ; level 2 ; orig_coord_info "chr5,141485174,141487615,+" ; protein_id "ENSP00000306918.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGC4^ENST00000306593.1" ; transcript_name "PCDHGC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGC4 HAVANA gene 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGC4^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGC4^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGC4^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA4--PCDHGC4 HAVANA mRNA 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGC4^ENST00000612927.1" ; Parent "PCDHGA4--PCDHGC4^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGC4^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGC4^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGC5 HAVANA gene 6692 14717 . + . FI_gene_label "PCDHGC5^ENSG00000240764.4" ; ID "PCDHGA4--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; ccdsid "CCDS4263.1" ; exon_id "ENSE00000766474.3" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; gene_name PCDHGC5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129624.2" ; havana_transcript "OTTHUMT00000251819.2" ; hgnc_id "HGNC:8718" ; level 2 ; orig_coord_info "chr5,141489241,141491700,+" ; protein_id "ENSP00000252087.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGC5^ENST00000252087.3" ; transcript_name "PCDHGC5-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA4--PCDHGC5 HAVANA mRNA 6692 14717 . + . FI_gene_label "PCDHGC5^ENSG00000240764.4" ; ID "PCDHGA4--PCDHGC5^ENST00000252087.3" ; Parent "PCDHGA4--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; ccdsid "CCDS4263.1" ; exon_id "ENSE00000766474.3" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; gene_name PCDHGC5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129624.2" ; havana_transcript "OTTHUMT00000251819.2" ; hgnc_id "HGNC:8718" ; level 2 ; orig_coord_info "chr5,141489241,141491700,+" ; protein_id "ENSP00000252087.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA4--PCDHGC5^ENST00000252087.3" ; transcript_name "PCDHGC5-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA4--PCDHGC5 HAVANA gene 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGC5^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGC5^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGC5^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA4--PCDHGC5 HAVANA mRNA 1001 3691 . + . FI_gene_label "PCDHGA4^ENSG00000262576.3" ; ID "PCDHGA4--PCDHGC5^ENST00000612927.1" ; Parent "PCDHGA4--PCDHGC5^PCDHGA4^ENSG00000262576.3" ; ccdsid "CCDS75331.1" ; exon_id "ENSE00003715198.1" ; exon_number 1 ; gene_id "PCDHGA4--PCDHGC5^PCDHGA4^ENSG00000262576.3" ; gene_name PCDHGA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177593.4" ; havana_transcript "OTTHUMT00000476684.1" ; hgnc_id "HGNC:8702" ; level 2 ; orig_coord_info "chr5,141355108,141357660,+" ; protein_id "ENSP00000477894.1" ; tag basic CCDS ; transcript_id "PCDHGA4--PCDHGC5^ENST00000612927.1" ; transcript_name "PCDHGA4-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA10 HAVANA gene 7742 17195 . + . FI_gene_label "PCDHGA10^ENSG00000253846.2" ; ID "PCDHGA5--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; ccdsid "CCDS47292.1" ; exon_id "ENSE00001792208.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; gene_name PCDHGA10 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163688.2" ; havana_transcript "OTTHUMT00000374747.1" ; hgnc_id "HGNC:8697" ; level 2 ; orig_coord_info "chr5,141413176,141415611,+" ; protein_id "ENSP00000381611.2" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA10^ENST00000398610.2" ; transcript_name "PCDHGA10-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGA10 HAVANA mRNA 7742 17195 . + . FI_gene_label "PCDHGA10^ENSG00000253846.2" ; ID "PCDHGA5--PCDHGA10^ENST00000398610.2" ; Parent "PCDHGA5--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; ccdsid "CCDS47292.1" ; exon_id "ENSE00001792208.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; gene_name PCDHGA10 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163688.2" ; havana_transcript "OTTHUMT00000374747.1" ; hgnc_id "HGNC:8697" ; level 2 ; orig_coord_info "chr5,141413176,141415611,+" ; protein_id "ENSP00000381611.2" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA10^ENST00000398610.2" ; transcript_name "PCDHGA10-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA10 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA10^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA10^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA10^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGA10 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA10^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGA10^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA10^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA10^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA11 HAVANA gene 7557 16362 . + . FI_gene_label "PCDHGA11^ENSG00000253873.6" ; ID "PCDHGA5--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; ccdsid "CCDS47294.1" ; exon_id "ENSE00001533810.3" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; gene_name PCDHGA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164055.3" ; havana_transcript "OTTHUMT00000376974.3" ; hgnc_id "HGNC:8698" ; level 2 ; orig_coord_info "chr5,141421228,141423660,+" ; protein_id "ENSP00000381589.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA11^ENST00000398587.7" ; transcript_name "PCDHGA11-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGA11 HAVANA mRNA 7557 16362 . + . FI_gene_label "PCDHGA11^ENSG00000253873.6" ; ID "PCDHGA5--PCDHGA11^ENST00000398587.7" ; Parent "PCDHGA5--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; ccdsid "CCDS47294.1" ; exon_id "ENSE00001533810.3" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; gene_name PCDHGA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164055.3" ; havana_transcript "OTTHUMT00000376974.3" ; hgnc_id "HGNC:8698" ; level 2 ; orig_coord_info "chr5,141421228,141423660,+" ; protein_id "ENSP00000381589.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA11^ENST00000398587.7" ; transcript_name "PCDHGA11-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA11 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA11^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA11^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA11^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGA11 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA11^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGA11^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA11^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA11^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA12 HAVANA gene 7553 15445 . + . FI_gene_label "PCDHGA12^ENSG00000253159.3" ; ID "PCDHGA5--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; ccdsid "CCDS4260.1" ; exon_id "ENSE00000814269.5" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; gene_name PCDHGA12 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129611.6" ; havana_transcript "OTTHUMT00000251806.3" ; hgnc_id "HGNC:8699" ; level 2 ; orig_coord_info "chr5,141430760,141433183,+" ; protein_id "ENSP00000252085.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA12^ENST00000252085.4" ; transcript_name "PCDHGA12-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGA12 HAVANA mRNA 7553 15445 . + . FI_gene_label "PCDHGA12^ENSG00000253159.3" ; ID "PCDHGA5--PCDHGA12^ENST00000252085.4" ; Parent "PCDHGA5--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; ccdsid "CCDS4260.1" ; exon_id "ENSE00000814269.5" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; gene_name PCDHGA12 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129611.6" ; havana_transcript "OTTHUMT00000251806.3" ; hgnc_id "HGNC:8699" ; level 2 ; orig_coord_info "chr5,141430760,141433183,+" ; protein_id "ENSP00000252085.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA12^ENST00000252085.4" ; transcript_name "PCDHGA12-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA12 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA12^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA12^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA12^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGA12 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA12^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGA12^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA12^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA12^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA8 HAVANA gene 10029 19209 . + . FI_gene_label "PCDHGA8^ENSG00000253767.3" ; ID "PCDHGA5--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; ccdsid "CCDS47291.1" ; exon_id "ENSE00001533882.3" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; gene_name PCDHGA8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164053.2" ; havana_transcript "OTTHUMT00000376972.1" ; hgnc_id "HGNC:8706" ; level 2 ; orig_coord_info "chr5,141392814,141395237,+" ; protein_id "ENSP00000381605.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA8^ENST00000398604.3" ; transcript_name "PCDHGA8-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGA8 HAVANA mRNA 10029 19209 . + . FI_gene_label "PCDHGA8^ENSG00000253767.3" ; ID "PCDHGA5--PCDHGA8^ENST00000398604.3" ; Parent "PCDHGA5--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; ccdsid "CCDS47291.1" ; exon_id "ENSE00001533882.3" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; gene_name PCDHGA8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164053.2" ; havana_transcript "OTTHUMT00000376972.1" ; hgnc_id "HGNC:8706" ; level 2 ; orig_coord_info "chr5,141392814,141395237,+" ; protein_id "ENSP00000381605.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA8^ENST00000398604.3" ; transcript_name "PCDHGA8-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA8 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA8^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA8^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA8^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGA8 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA8^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGA8^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA8^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA8^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA9 HAVANA gene 7574 15301 . + . FI_gene_label "PCDHGA9^ENSG00000261934.2" ; ID "PCDHGA5--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; ccdsid "CCDS58981.1" ; exon_id "ENSE00002639131.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; gene_name PCDHGA9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177473.2" ; havana_transcript "OTTHUMT00000437105.1" ; hgnc_id "HGNC:8707" ; level 2 ; orig_coord_info "chr5,141402953,141405376,+" ; protein_id "ENSP00000460274.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA9^ENST00000573521.1" ; transcript_name "PCDHGA9-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGA9 HAVANA mRNA 7574 15301 . + . FI_gene_label "PCDHGA9^ENSG00000261934.2" ; ID "PCDHGA5--PCDHGA9^ENST00000573521.1" ; Parent "PCDHGA5--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; ccdsid "CCDS58981.1" ; exon_id "ENSE00002639131.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; gene_name PCDHGA9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177473.2" ; havana_transcript "OTTHUMT00000437105.1" ; hgnc_id "HGNC:8707" ; level 2 ; orig_coord_info "chr5,141402953,141405376,+" ; protein_id "ENSP00000460274.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA9^ENST00000573521.1" ; transcript_name "PCDHGA9-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA9 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA9^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA9^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA9^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGA9 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA9^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGA9^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA9^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA9^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGB6 HAVANA gene 7735 17334 . + . FI_gene_label "PCDHGB6^ENSG00000253305.2" ; ID "PCDHGA5--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; ccdsid "CCDS54929.1" ; exon_id "ENSE00002122685.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; gene_name PCDHGB6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163687.2" ; havana_transcript "OTTHUMT00000374746.1" ; hgnc_id "HGNC:8713" ; level 2 ; orig_coord_info "chr5,141408203,141410620,+" ; protein_id "ENSP00000428603.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGB6^ENST00000520790.1" ; transcript_name "PCDHGB6-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGB6 HAVANA mRNA 7735 17334 . + . FI_gene_label "PCDHGB6^ENSG00000253305.2" ; ID "PCDHGA5--PCDHGB6^ENST00000520790.1" ; Parent "PCDHGA5--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; ccdsid "CCDS54929.1" ; exon_id "ENSE00002122685.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; gene_name PCDHGB6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163687.2" ; havana_transcript "OTTHUMT00000374746.1" ; hgnc_id "HGNC:8713" ; level 2 ; orig_coord_info "chr5,141408203,141410620,+" ; protein_id "ENSP00000428603.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGB6^ENST00000520790.1" ; transcript_name "PCDHGB6-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGB6 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGB6^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGB6^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGB6^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGB6 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGB6^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGB6^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGB6^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGB6^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGB7 HAVANA gene 7585 15514 . + . FI_gene_label "PCDHGB7^ENSG00000254122.3" ; ID "PCDHGA5--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; ccdsid "CCDS47293.1" ; exon_id "ENSE00001533845.4" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; gene_name PCDHGB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164054.2" ; havana_transcript "OTTHUMT00000376973.2" ; hgnc_id "HGNC:8714" ; level 2 ; orig_coord_info "chr5,141417860,141420274,+" ; protein_id "ENSP00000381594.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGB7^ENST00000398594.4" ; transcript_name "PCDHGB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGB7 HAVANA mRNA 7585 15514 . + . FI_gene_label "PCDHGB7^ENSG00000254122.3" ; ID "PCDHGA5--PCDHGB7^ENST00000398594.4" ; Parent "PCDHGA5--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; ccdsid "CCDS47293.1" ; exon_id "ENSE00001533845.4" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; gene_name PCDHGB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164054.2" ; havana_transcript "OTTHUMT00000376973.2" ; hgnc_id "HGNC:8714" ; level 2 ; orig_coord_info "chr5,141417860,141420274,+" ; protein_id "ENSP00000381594.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGB7^ENST00000398594.4" ; transcript_name "PCDHGB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGB7 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGB7^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGB7^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGB7^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGB7 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGB7^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGB7^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGB7^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGB7^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGC3 HAVANA gene 7572 17758 . + . FI_gene_label "PCDHGC3^ENSG00000240184.7" ; ID "PCDHGA5--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; ccdsid "CCDS4261.1" ; exon_id "ENSE00001199459.7" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; gene_name PCDHGC3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129613.8" ; havana_transcript "OTTHUMT00000251808.5" ; hgnc_id "HGNC:8716" ; level 2 ; orig_coord_info "chr5,141476117,141478546,+" ; protein_id "ENSP00000312070.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGC3^ENST00000308177.5" ; transcript_name "PCDHGC3-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGC3 HAVANA mRNA 7572 17758 . + . FI_gene_label "PCDHGC3^ENSG00000240184.7" ; ID "PCDHGA5--PCDHGC3^ENST00000308177.5" ; Parent "PCDHGA5--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; ccdsid "CCDS4261.1" ; exon_id "ENSE00001199459.7" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; gene_name PCDHGC3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129613.8" ; havana_transcript "OTTHUMT00000251808.5" ; hgnc_id "HGNC:8716" ; level 2 ; orig_coord_info "chr5,141476117,141478546,+" ; protein_id "ENSP00000312070.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGC3^ENST00000308177.5" ; transcript_name "PCDHGC3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGC3 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGC3^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC3^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGC3^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGC3 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGC3^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGC3^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC3^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGC3^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGC4 HAVANA gene 7730 15526 . + . FI_gene_label "PCDHGC4^ENSG00000242419.5" ; ID "PCDHGA5--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; ccdsid "CCDS4262.1" ; exon_id "ENSE00001162305.2" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; gene_name PCDHGC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129625.4" ; havana_transcript "OTTHUMT00000251820.2" ; hgnc_id "HGNC:8717" ; level 2 ; orig_coord_info "chr5,141485174,141487615,+" ; protein_id "ENSP00000306918.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGC4^ENST00000306593.1" ; transcript_name "PCDHGC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGC4 HAVANA mRNA 7730 15526 . + . FI_gene_label "PCDHGC4^ENSG00000242419.5" ; ID "PCDHGA5--PCDHGC4^ENST00000306593.1" ; Parent "PCDHGA5--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; ccdsid "CCDS4262.1" ; exon_id "ENSE00001162305.2" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; gene_name PCDHGC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129625.4" ; havana_transcript "OTTHUMT00000251820.2" ; hgnc_id "HGNC:8717" ; level 2 ; orig_coord_info "chr5,141485174,141487615,+" ; protein_id "ENSP00000306918.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGC4^ENST00000306593.1" ; transcript_name "PCDHGC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGC4 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGC4^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC4^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGC4^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGC4 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGC4^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGC4^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC4^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGC4^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGC5 HAVANA gene 7553 15578 . + . FI_gene_label "PCDHGC5^ENSG00000240764.4" ; ID "PCDHGA5--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; ccdsid "CCDS4263.1" ; exon_id "ENSE00000766474.3" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; gene_name PCDHGC5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129624.2" ; havana_transcript "OTTHUMT00000251819.2" ; hgnc_id "HGNC:8718" ; level 2 ; orig_coord_info "chr5,141489241,141491700,+" ; protein_id "ENSP00000252087.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGC5^ENST00000252087.3" ; transcript_name "PCDHGC5-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGC5 HAVANA mRNA 7553 15578 . + . FI_gene_label "PCDHGC5^ENSG00000240764.4" ; ID "PCDHGA5--PCDHGC5^ENST00000252087.3" ; Parent "PCDHGA5--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; ccdsid "CCDS4263.1" ; exon_id "ENSE00000766474.3" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; gene_name PCDHGC5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129624.2" ; havana_transcript "OTTHUMT00000251819.2" ; hgnc_id "HGNC:8718" ; level 2 ; orig_coord_info "chr5,141489241,141491700,+" ; protein_id "ENSP00000252087.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGC5^ENST00000252087.3" ; transcript_name "PCDHGC5-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGC5 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGC5^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC5^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGC5^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGC5 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGC5^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGC5^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC5^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGC5^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA10 HAVANA gene 6778 16231 . + . FI_gene_label "PCDHGA10^ENSG00000253846.2" ; ID "PCDHGB2--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; ccdsid "CCDS47292.1" ; exon_id "ENSE00001792208.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; gene_name PCDHGA10 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163688.2" ; havana_transcript "OTTHUMT00000374747.1" ; hgnc_id "HGNC:8697" ; level 2 ; orig_coord_info "chr5,141413176,141415611,+" ; protein_id "ENSP00000381611.2" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA10^ENST00000398610.2" ; transcript_name "PCDHGA10-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGA10 HAVANA mRNA 6778 16231 . + . FI_gene_label "PCDHGA10^ENSG00000253846.2" ; ID "PCDHGB2--PCDHGA10^ENST00000398610.2" ; Parent "PCDHGB2--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; ccdsid "CCDS47292.1" ; exon_id "ENSE00001792208.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; gene_name PCDHGA10 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163688.2" ; havana_transcript "OTTHUMT00000374747.1" ; hgnc_id "HGNC:8697" ; level 2 ; orig_coord_info "chr5,141413176,141415611,+" ; protein_id "ENSP00000381611.2" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA10^ENST00000398610.2" ; transcript_name "PCDHGA10-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA10 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA10^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA10^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA10^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGA10 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA10^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGA10^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA10^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA10^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA11 HAVANA gene 6593 15398 . + . FI_gene_label "PCDHGA11^ENSG00000253873.6" ; ID "PCDHGB2--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; ccdsid "CCDS47294.1" ; exon_id "ENSE00001533810.3" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; gene_name PCDHGA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164055.3" ; havana_transcript "OTTHUMT00000376974.3" ; hgnc_id "HGNC:8698" ; level 2 ; orig_coord_info "chr5,141421228,141423660,+" ; protein_id "ENSP00000381589.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA11^ENST00000398587.7" ; transcript_name "PCDHGA11-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGA11 HAVANA mRNA 6593 15398 . + . FI_gene_label "PCDHGA11^ENSG00000253873.6" ; ID "PCDHGB2--PCDHGA11^ENST00000398587.7" ; Parent "PCDHGB2--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; ccdsid "CCDS47294.1" ; exon_id "ENSE00001533810.3" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; gene_name PCDHGA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164055.3" ; havana_transcript "OTTHUMT00000376974.3" ; hgnc_id "HGNC:8698" ; level 2 ; orig_coord_info "chr5,141421228,141423660,+" ; protein_id "ENSP00000381589.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA11^ENST00000398587.7" ; transcript_name "PCDHGA11-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA11 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA11^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA11^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA11^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGA11 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA11^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGA11^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA11^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA11^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA12 HAVANA gene 6589 14481 . + . FI_gene_label "PCDHGA12^ENSG00000253159.3" ; ID "PCDHGB2--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; ccdsid "CCDS4260.1" ; exon_id "ENSE00000814269.5" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; gene_name PCDHGA12 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129611.6" ; havana_transcript "OTTHUMT00000251806.3" ; hgnc_id "HGNC:8699" ; level 2 ; orig_coord_info "chr5,141430760,141433183,+" ; protein_id "ENSP00000252085.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA12^ENST00000252085.4" ; transcript_name "PCDHGA12-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGA12 HAVANA mRNA 6589 14481 . + . FI_gene_label "PCDHGA12^ENSG00000253159.3" ; ID "PCDHGB2--PCDHGA12^ENST00000252085.4" ; Parent "PCDHGB2--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; ccdsid "CCDS4260.1" ; exon_id "ENSE00000814269.5" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; gene_name PCDHGA12 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129611.6" ; havana_transcript "OTTHUMT00000251806.3" ; hgnc_id "HGNC:8699" ; level 2 ; orig_coord_info "chr5,141430760,141433183,+" ; protein_id "ENSP00000252085.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA12^ENST00000252085.4" ; transcript_name "PCDHGA12-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA12 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA12^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA12^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA12^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGA12 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA12^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGA12^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA12^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA12^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA8 HAVANA gene 9065 18245 . + . FI_gene_label "PCDHGA8^ENSG00000253767.3" ; ID "PCDHGB2--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; ccdsid "CCDS47291.1" ; exon_id "ENSE00001533882.3" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; gene_name PCDHGA8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164053.2" ; havana_transcript "OTTHUMT00000376972.1" ; hgnc_id "HGNC:8706" ; level 2 ; orig_coord_info "chr5,141392814,141395237,+" ; protein_id "ENSP00000381605.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA8^ENST00000398604.3" ; transcript_name "PCDHGA8-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGA8 HAVANA mRNA 9065 18245 . + . FI_gene_label "PCDHGA8^ENSG00000253767.3" ; ID "PCDHGB2--PCDHGA8^ENST00000398604.3" ; Parent "PCDHGB2--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; ccdsid "CCDS47291.1" ; exon_id "ENSE00001533882.3" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; gene_name PCDHGA8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164053.2" ; havana_transcript "OTTHUMT00000376972.1" ; hgnc_id "HGNC:8706" ; level 2 ; orig_coord_info "chr5,141392814,141395237,+" ; protein_id "ENSP00000381605.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA8^ENST00000398604.3" ; transcript_name "PCDHGA8-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA8 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA8^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA8^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA8^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGA8 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA8^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGA8^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA8^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA8^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA9 HAVANA gene 6610 14337 . + . FI_gene_label "PCDHGA9^ENSG00000261934.2" ; ID "PCDHGB2--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; ccdsid "CCDS58981.1" ; exon_id "ENSE00002639131.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; gene_name PCDHGA9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177473.2" ; havana_transcript "OTTHUMT00000437105.1" ; hgnc_id "HGNC:8707" ; level 2 ; orig_coord_info "chr5,141402953,141405376,+" ; protein_id "ENSP00000460274.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA9^ENST00000573521.1" ; transcript_name "PCDHGA9-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGA9 HAVANA mRNA 6610 14337 . + . FI_gene_label "PCDHGA9^ENSG00000261934.2" ; ID "PCDHGB2--PCDHGA9^ENST00000573521.1" ; Parent "PCDHGB2--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; ccdsid "CCDS58981.1" ; exon_id "ENSE00002639131.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; gene_name PCDHGA9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177473.2" ; havana_transcript "OTTHUMT00000437105.1" ; hgnc_id "HGNC:8707" ; level 2 ; orig_coord_info "chr5,141402953,141405376,+" ; protein_id "ENSP00000460274.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA9^ENST00000573521.1" ; transcript_name "PCDHGA9-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA9 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA9^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA9^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA9^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGA9 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA9^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGA9^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA9^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA9^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGB6 HAVANA gene 6771 16370 . + . FI_gene_label "PCDHGB6^ENSG00000253305.2" ; ID "PCDHGB2--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; ccdsid "CCDS54929.1" ; exon_id "ENSE00002122685.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; gene_name PCDHGB6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163687.2" ; havana_transcript "OTTHUMT00000374746.1" ; hgnc_id "HGNC:8713" ; level 2 ; orig_coord_info "chr5,141408203,141410620,+" ; protein_id "ENSP00000428603.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGB6^ENST00000520790.1" ; transcript_name "PCDHGB6-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGB6 HAVANA mRNA 6771 16370 . + . FI_gene_label "PCDHGB6^ENSG00000253305.2" ; ID "PCDHGB2--PCDHGB6^ENST00000520790.1" ; Parent "PCDHGB2--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; ccdsid "CCDS54929.1" ; exon_id "ENSE00002122685.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; gene_name PCDHGB6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163687.2" ; havana_transcript "OTTHUMT00000374746.1" ; hgnc_id "HGNC:8713" ; level 2 ; orig_coord_info "chr5,141408203,141410620,+" ; protein_id "ENSP00000428603.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGB6^ENST00000520790.1" ; transcript_name "PCDHGB6-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGB6 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGB6^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGB6^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGB6^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGB6 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGB6^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGB6^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGB6^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGB6^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGB7 HAVANA gene 6621 14550 . + . FI_gene_label "PCDHGB7^ENSG00000254122.3" ; ID "PCDHGB2--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; ccdsid "CCDS47293.1" ; exon_id "ENSE00001533845.4" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; gene_name PCDHGB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164054.2" ; havana_transcript "OTTHUMT00000376973.2" ; hgnc_id "HGNC:8714" ; level 2 ; orig_coord_info "chr5,141417860,141420274,+" ; protein_id "ENSP00000381594.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGB7^ENST00000398594.4" ; transcript_name "PCDHGB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGB7 HAVANA mRNA 6621 14550 . + . FI_gene_label "PCDHGB7^ENSG00000254122.3" ; ID "PCDHGB2--PCDHGB7^ENST00000398594.4" ; Parent "PCDHGB2--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; ccdsid "CCDS47293.1" ; exon_id "ENSE00001533845.4" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; gene_name PCDHGB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164054.2" ; havana_transcript "OTTHUMT00000376973.2" ; hgnc_id "HGNC:8714" ; level 2 ; orig_coord_info "chr5,141417860,141420274,+" ; protein_id "ENSP00000381594.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGB7^ENST00000398594.4" ; transcript_name "PCDHGB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGB7 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGB7^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGB7^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGB7^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGB7 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGB7^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGB7^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGB7^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGB7^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGC3 HAVANA gene 6608 16794 . + . FI_gene_label "PCDHGC3^ENSG00000240184.7" ; ID "PCDHGB2--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; ccdsid "CCDS4261.1" ; exon_id "ENSE00001199459.7" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; gene_name PCDHGC3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129613.8" ; havana_transcript "OTTHUMT00000251808.5" ; hgnc_id "HGNC:8716" ; level 2 ; orig_coord_info "chr5,141476117,141478546,+" ; protein_id "ENSP00000312070.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGC3^ENST00000308177.5" ; transcript_name "PCDHGC3-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGC3 HAVANA mRNA 6608 16794 . + . FI_gene_label "PCDHGC3^ENSG00000240184.7" ; ID "PCDHGB2--PCDHGC3^ENST00000308177.5" ; Parent "PCDHGB2--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; ccdsid "CCDS4261.1" ; exon_id "ENSE00001199459.7" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; gene_name PCDHGC3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129613.8" ; havana_transcript "OTTHUMT00000251808.5" ; hgnc_id "HGNC:8716" ; level 2 ; orig_coord_info "chr5,141476117,141478546,+" ; protein_id "ENSP00000312070.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGC3^ENST00000308177.5" ; transcript_name "PCDHGC3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGC3 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGC3^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC3^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGC3^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGC3 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGC3^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGC3^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC3^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGC3^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGC4 HAVANA gene 6766 14562 . + . FI_gene_label "PCDHGC4^ENSG00000242419.5" ; ID "PCDHGB2--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; ccdsid "CCDS4262.1" ; exon_id "ENSE00001162305.2" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; gene_name PCDHGC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129625.4" ; havana_transcript "OTTHUMT00000251820.2" ; hgnc_id "HGNC:8717" ; level 2 ; orig_coord_info "chr5,141485174,141487615,+" ; protein_id "ENSP00000306918.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGC4^ENST00000306593.1" ; transcript_name "PCDHGC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGC4 HAVANA mRNA 6766 14562 . + . FI_gene_label "PCDHGC4^ENSG00000242419.5" ; ID "PCDHGB2--PCDHGC4^ENST00000306593.1" ; Parent "PCDHGB2--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; ccdsid "CCDS4262.1" ; exon_id "ENSE00001162305.2" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; gene_name PCDHGC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129625.4" ; havana_transcript "OTTHUMT00000251820.2" ; hgnc_id "HGNC:8717" ; level 2 ; orig_coord_info "chr5,141485174,141487615,+" ; protein_id "ENSP00000306918.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGC4^ENST00000306593.1" ; transcript_name "PCDHGC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGC4 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGC4^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC4^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGC4^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGC4 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGC4^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGC4^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC4^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGC4^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGC5 HAVANA gene 6589 14614 . + . FI_gene_label "PCDHGC5^ENSG00000240764.4" ; ID "PCDHGB2--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; ccdsid "CCDS4263.1" ; exon_id "ENSE00000766474.3" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; gene_name PCDHGC5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129624.2" ; havana_transcript "OTTHUMT00000251819.2" ; hgnc_id "HGNC:8718" ; level 2 ; orig_coord_info "chr5,141489241,141491700,+" ; protein_id "ENSP00000252087.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGC5^ENST00000252087.3" ; transcript_name "PCDHGC5-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGC5 HAVANA mRNA 6589 14614 . + . FI_gene_label "PCDHGC5^ENSG00000240764.4" ; ID "PCDHGB2--PCDHGC5^ENST00000252087.3" ; Parent "PCDHGB2--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; ccdsid "CCDS4263.1" ; exon_id "ENSE00000766474.3" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; gene_name PCDHGC5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129624.2" ; havana_transcript "OTTHUMT00000251819.2" ; hgnc_id "HGNC:8718" ; level 2 ; orig_coord_info "chr5,141489241,141491700,+" ; protein_id "ENSP00000252087.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGC5^ENST00000252087.3" ; transcript_name "PCDHGC5-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGC5 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGC5^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC5^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGC5^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGC5 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGC5^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGC5^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC5^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGC5^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PLAA--AL353753.1 HAVANA gene 1001 17922 . + . FI_gene_label "PLAA^ENSG00000137055.15" ; ID "PLAA--AL353753.1^PLAA^ENSG00000137055.15" ; ccdsid "CCDS35000.1" ; exon_id "ENSE00001640499.3" ; exon_number 1 ; gene_id "PLAA--AL353753.1^PLAA^ENSG00000137055.15" ; gene_name PLAA ; gene_type protein_coding ; havana_gene "OTTHUMG00000019708.5" ; havana_transcript "OTTHUMT00000051958.3" ; hgnc_id "HGNC:9043" ; level 2 ; orig_coord_info "chr9,26946897,26947045,-" ; protein_id "ENSP00000380460.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PLAA--AL353753.1^ENST00000397292.8" ; transcript_name "PLAA-201" ; transcript_support_level 1 ; transcript_type protein_coding
PLAA--AL353753.1 HAVANA mRNA 1001 17922 . + . FI_gene_label "PLAA^ENSG00000137055.15" ; ID "PLAA--AL353753.1^ENST00000397292.8" ; Parent "PLAA--AL353753.1^PLAA^ENSG00000137055.15" ; ccdsid "CCDS35000.1" ; exon_id "ENSE00001640499.3" ; exon_number 1 ; gene_id "PLAA--AL353753.1^PLAA^ENSG00000137055.15" ; gene_name PLAA ; gene_type protein_coding ; havana_gene "OTTHUMG00000019708.5" ; havana_transcript "OTTHUMT00000051958.3" ; hgnc_id "HGNC:9043" ; level 2 ; orig_coord_info "chr9,26946897,26947045,-" ; protein_id "ENSP00000380460.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PLAA--AL353753.1^ENST00000397292.8" ; transcript_name "PLAA-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PLAA--FAM71BP1 HAVANA gene 1001 17922 . + . FI_gene_label "PLAA^ENSG00000137055.15" ; ID "PLAA--FAM71BP1^PLAA^ENSG00000137055.15" ; ccdsid "CCDS35000.1" ; exon_id "ENSE00001640499.3" ; exon_number 1 ; gene_id "PLAA--FAM71BP1^PLAA^ENSG00000137055.15" ; gene_name PLAA ; gene_type protein_coding ; havana_gene "OTTHUMG00000019708.5" ; havana_transcript "OTTHUMT00000051958.3" ; hgnc_id "HGNC:9043" ; level 2 ; orig_coord_info "chr9,26946897,26947045,-" ; protein_id "ENSP00000380460.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PLAA--FAM71BP1^ENST00000397292.8" ; transcript_name "PLAA-201" ; transcript_support_level 1 ; transcript_type protein_coding
PLAA--FAM71BP1 HAVANA mRNA 1001 17922 . + . FI_gene_label "PLAA^ENSG00000137055.15" ; ID "PLAA--FAM71BP1^ENST00000397292.8" ; Parent "PLAA--FAM71BP1^PLAA^ENSG00000137055.15" ; ccdsid "CCDS35000.1" ; exon_id "ENSE00001640499.3" ; exon_number 1 ; gene_id "PLAA--FAM71BP1^PLAA^ENSG00000137055.15" ; gene_name PLAA ; gene_type protein_coding ; havana_gene "OTTHUMG00000019708.5" ; havana_transcript "OTTHUMT00000051958.3" ; hgnc_id "HGNC:9043" ; level 2 ; orig_coord_info "chr9,26946897,26947045,-" ; protein_id "ENSP00000380460.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PLAA--FAM71BP1^ENST00000397292.8" ; transcript_name "PLAA-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PLEKHM1P1--MAP3K3 HAVANA gene 25828 46183 . + . FI_gene_label "MAP3K3^ENSG00000198909.8" ; ID "PLEKHM1P1--MAP3K3^MAP3K3^ENSG00000198909.8" ; ccdsid "CCDS32701.1" ; exon_id "ENSE00002701934.1" ; exon_number 1 ; gene_id "PLEKHM1P1--MAP3K3^MAP3K3^ENSG00000198909.8" ; gene_name MAP3K3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178905.1" ; havana_transcript "OTTHUMT00000443868.1" ; hgnc_id "HGNC:6855" ; level 2 ; orig_coord_info "chr17,63622760,63622763,+" ; protein_id "ENSP00000354927.3" ; tag basic CCDS ; transcript_id "PLEKHM1P1--MAP3K3^ENST00000361357.7" ; transcript_name "MAP3K3-201" ; transcript_support_level 1 ; transcript_type protein_coding
PLEKHM1P1--MAP3K3 HAVANA mRNA 25828 46183 . + . FI_gene_label "MAP3K3^ENSG00000198909.8" ; ID "PLEKHM1P1--MAP3K3^ENST00000361357.7" ; Parent "PLEKHM1P1--MAP3K3^MAP3K3^ENSG00000198909.8" ; ccdsid "CCDS32701.1" ; exon_id "ENSE00002701934.1" ; exon_number 1 ; gene_id "PLEKHM1P1--MAP3K3^MAP3K3^ENSG00000198909.8" ; gene_name MAP3K3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178905.1" ; havana_transcript "OTTHUMT00000443868.1" ; hgnc_id "HGNC:6855" ; level 2 ; orig_coord_info "chr17,63622760,63622763,+" ; protein_id "ENSP00000354927.3" ; tag basic CCDS ; transcript_id "PLEKHM1P1--MAP3K3^ENST00000361357.7" ; transcript_name "MAP3K3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PLEKHM1P1--SP2 HAVANA gene 25887 38533 . + . FI_gene_label "SP2^ENSG00000167182.15" ; ID "PLEKHM1P1--SP2^SP2^ENSG00000167182.15" ; ccdsid "CCDS11521.2" ; exon_id "ENSE00002729406.2" ; exon_number 1 ; gene_id "PLEKHM1P1--SP2^SP2^ENSG00000167182.15" ; gene_name SP2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150196.4" ; havana_transcript "OTTHUMT00000316777.3" ; hgnc_id "HGNC:11207" ; level 2 ; orig_coord_info "chr17,47896287,47896293,+" ; protein_id "ENSP00000365931.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PLEKHM1P1--SP2^ENST00000376741.5" ; transcript_name "SP2-201" ; transcript_support_level 1 ; transcript_type protein_coding
PLEKHM1P1--SP2 HAVANA mRNA 25887 38533 . + . FI_gene_label "SP2^ENSG00000167182.15" ; ID "PLEKHM1P1--SP2^ENST00000376741.5" ; Parent "PLEKHM1P1--SP2^SP2^ENSG00000167182.15" ; ccdsid "CCDS11521.2" ; exon_id "ENSE00002729406.2" ; exon_number 1 ; gene_id "PLEKHM1P1--SP2^SP2^ENSG00000167182.15" ; gene_name SP2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150196.4" ; havana_transcript "OTTHUMT00000316777.3" ; hgnc_id "HGNC:11207" ; level 2 ; orig_coord_info "chr17,47896287,47896293,+" ; protein_id "ENSP00000365931.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PLEKHM1P1--SP2^ENST00000376741.5" ; transcript_name "SP2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
POU2F1--PCAT1 HAVANA gene 1015 43254 . + . FI_gene_label "POU2F1^ENSG00000143190.23" ; ID "POU2F1--PCAT1^POU2F1^ENSG00000143190.23" ; exon_id "ENSE00003697634.2" ; exon_number 1 ; gene_id "POU2F1--PCAT1^POU2F1^ENSG00000143190.23" ; gene_name POU2F1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000034436.12" ; havana_transcript "OTTHUMT00000083246.5" ; hgnc_id "HGNC:9212" ; level 2 ; orig_coord_info "chr1,167220898,167220958,+" ; protein_id "ENSP00000271411.5" ; transcript_id "POU2F1--PCAT1^ENST00000271411.8" ; transcript_name "POU2F1-201" ; transcript_support_level 1 ; transcript_type nonsense_mediated_decay
POU2F1--PCAT1 HAVANA mRNA 1015 43254 . + . FI_gene_label "POU2F1^ENSG00000143190.23" ; ID "POU2F1--PCAT1^ENST00000271411.8" ; Parent "POU2F1--PCAT1^POU2F1^ENSG00000143190.23" ; exon_id "ENSE00003697634.2" ; exon_number 1 ; gene_id "POU2F1--PCAT1^POU2F1^ENSG00000143190.23" ; gene_name POU2F1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000034436.12" ; havana_transcript "OTTHUMT00000083246.5" ; hgnc_id "HGNC:9212" ; level 2 ; orig_coord_info "chr1,167220898,167220958,+" ; protein_id "ENSP00000271411.5" ; transcript_id "POU2F1--PCAT1^ENST00000271411.8" ; transcript_name "POU2F1-201" ; transcript_support_level 1 ; transcript_type nonsense_mediated_decay
L1 and L2 created:
PRR15L--ACSF2 HAVANA gene 6585 20475 . + . FI_gene_label "ACSF2^ENSG00000167107.13" ; ID "PRR15L--ACSF2^ACSF2^ENSG00000167107.13" ; ccdsid "CCDS11567.1" ; exon_id "ENSE00003678158.1" ; exon_number 1 ; gene_id "PRR15L--ACSF2^ACSF2^ENSG00000167107.13" ; gene_name ACSF2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162128.5" ; havana_transcript "OTTHUMT00000367423.3" ; hgnc_id "HGNC:26101" ; level 2 ; orig_coord_info "chr17,50426262,50426389,+" ; protein_id "ENSP00000300441.4" ; tag basic MANE_Select appris_principal_2 CCDS ; transcript_id "PRR15L--ACSF2^ENST00000300441.9" ; transcript_name "ACSF2-201" ; transcript_support_level 1 ; transcript_type protein_coding
PRR15L--ACSF2 HAVANA mRNA 6585 20475 . + . FI_gene_label "ACSF2^ENSG00000167107.13" ; ID "PRR15L--ACSF2^ENST00000300441.9" ; Parent "PRR15L--ACSF2^ACSF2^ENSG00000167107.13" ; ccdsid "CCDS11567.1" ; exon_id "ENSE00003678158.1" ; exon_number 1 ; gene_id "PRR15L--ACSF2^ACSF2^ENSG00000167107.13" ; gene_name ACSF2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162128.5" ; havana_transcript "OTTHUMT00000367423.3" ; hgnc_id "HGNC:26101" ; level 2 ; orig_coord_info "chr17,50426262,50426389,+" ; protein_id "ENSP00000300441.4" ; tag basic MANE_Select appris_principal_2 CCDS ; transcript_id "PRR15L--ACSF2^ENST00000300441.9" ; transcript_name "ACSF2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PRR15L--ACSF2 HAVANA gene 1001 3524 . + . FI_gene_label "PRR15L^ENSG00000167183.3" ; ID "PRR15L--ACSF2^PRR15L^ENSG00000167183.3" ; ccdsid "CCDS11523.1" ; exon_id "ENSE00001110692.3" ; exon_number 2 ; gene_id "PRR15L--ACSF2^PRR15L^ENSG00000167183.3" ; gene_name PRR15L ; gene_type protein_coding ; havana_gene "OTTHUMG00000178297.2" ; havana_transcript "OTTHUMT00000441413.2" ; hgnc_id "HGNC:28149" ; level 2 ; orig_coord_info "chr17,47952926,47953234,-" ; protein_id "ENSP00000300557.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PRR15L--ACSF2^ENST00000300557.3" ; transcript_name "PRR15L-201" ; transcript_support_level 1 ; transcript_type protein_coding
PRR15L--ACSF2 HAVANA mRNA 1001 3524 . + . FI_gene_label "PRR15L^ENSG00000167183.3" ; ID "PRR15L--ACSF2^ENST00000300557.3" ; Parent "PRR15L--ACSF2^PRR15L^ENSG00000167183.3" ; ccdsid "CCDS11523.1" ; exon_id "ENSE00001110692.3" ; exon_number 2 ; gene_id "PRR15L--ACSF2^PRR15L^ENSG00000167183.3" ; gene_name PRR15L ; gene_type protein_coding ; havana_gene "OTTHUMG00000178297.2" ; havana_transcript "OTTHUMT00000441413.2" ; hgnc_id "HGNC:28149" ; level 2 ; orig_coord_info "chr17,47952926,47953234,-" ; protein_id "ENSP00000300557.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PRR15L--ACSF2^ENST00000300557.3" ; transcript_name "PRR15L-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
RAI1--MYO15A HAVANA gene 1001 17921 . + . FI_gene_label "RAI1^ENSG00000108557.19" ; ID "RAI1--MYO15A^RAI1^ENSG00000108557.19" ; ccdsid "CCDS11188.1" ; exon_id "ENSE00001291642.2" ; exon_number 3 ; gene_id "RAI1--MYO15A^RAI1^ENSG00000108557.19" ; gene_name RAI1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000059314.4" ; havana_transcript "OTTHUMT00000131775.2" ; hgnc_id "HGNC:9834" ; level 2 ; orig_coord_info "chr17,17792949,17798513,+" ; protein_id "ENSP00000323074.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "RAI1--MYO15A^ENST00000353383.6" ; transcript_name "RAI1-201" ; transcript_support_level 1 ; transcript_type protein_coding
RAI1--MYO15A HAVANA mRNA 1001 17921 . + . FI_gene_label "RAI1^ENSG00000108557.19" ; ID "RAI1--MYO15A^ENST00000353383.6" ; Parent "RAI1--MYO15A^RAI1^ENSG00000108557.19" ; ccdsid "CCDS11188.1" ; exon_id "ENSE00001291642.2" ; exon_number 3 ; gene_id "RAI1--MYO15A^RAI1^ENSG00000108557.19" ; gene_name RAI1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000059314.4" ; havana_transcript "OTTHUMT00000131775.2" ; hgnc_id "HGNC:9834" ; level 2 ; orig_coord_info "chr17,17792949,17798513,+" ; protein_id "ENSP00000323074.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "RAI1--MYO15A^ENST00000353383.6" ; transcript_name "RAI1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
RAI1--MYO15A HAVANA gene 51481 71206 . + . FI_gene_label "MYO15A^ENSG00000091536.19" ; ID "RAI1--MYO15A^MYO15A^ENSG00000091536.19" ; exon_id "ENSE00003795816.1" ; exon_number 3 ; gene_id "RAI1--MYO15A^MYO15A^ENSG00000091536.19" ; gene_name MYO15A ; gene_type protein_coding ; havana_gene "OTTHUMG00000059390.14" ; havana_transcript "OTTHUMT00000446125.1" ; hgnc_id "HGNC:7594" ; level 1 ; orig_coord_info "chr17,18154740,18154755,+" ; protein_id "ENSP00000408800.3" ; tag basic exp_conf ; transcript_id "RAI1--MYO15A^ENST00000418233.7" ; transcript_name "MYO15A-202" ; transcript_support_level 2 ; transcript_type protein_coding
RAI1--MYO15A HAVANA mRNA 51481 71206 . + . FI_gene_label "MYO15A^ENSG00000091536.19" ; ID "RAI1--MYO15A^ENST00000418233.7" ; Parent "RAI1--MYO15A^MYO15A^ENSG00000091536.19" ; exon_id "ENSE00003795816.1" ; exon_number 3 ; gene_id "RAI1--MYO15A^MYO15A^ENSG00000091536.19" ; gene_name MYO15A ; gene_type protein_coding ; havana_gene "OTTHUMG00000059390.14" ; havana_transcript "OTTHUMT00000446125.1" ; hgnc_id "HGNC:7594" ; level 1 ; orig_coord_info "chr17,18154740,18154755,+" ; protein_id "ENSP00000408800.3" ; tag basic exp_conf ; transcript_id "RAI1--MYO15A^ENST00000418233.7" ; transcript_name "MYO15A-202" ; transcript_support_level 2 ; transcript_type protein_coding
L1 and L2 created:
RALY--TTR HAVANA gene 25634 30286 . + . FI_gene_label "TTR^ENSG00000118271.12" ; ID "RALY--TTR^TTR^ENSG00000118271.12" ; ccdsid "CCDS11899.1" ; exon_id "ENSE00001836564.2" ; exon_number 1 ; gene_id "RALY--TTR^TTR^ENSG00000118271.12" ; gene_name TTR ; gene_type protein_coding ; havana_gene "OTTHUMG00000131984.4" ; havana_transcript "OTTHUMT00000254948.1" ; hgnc_id "HGNC:12405" ; level 2 ; orig_coord_info "chr18,31591903,31591971,+" ; protein_id "ENSP00000237014.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "RALY--TTR^ENST00000237014.8" ; transcript_name "TTR-201" ; transcript_support_level 1 ; transcript_type protein_coding
RALY--TTR HAVANA mRNA 25634 30286 . + . FI_gene_label "TTR^ENSG00000118271.12" ; ID "RALY--TTR^ENST00000237014.8" ; Parent "RALY--TTR^TTR^ENSG00000118271.12" ; ccdsid "CCDS11899.1" ; exon_id "ENSE00001836564.2" ; exon_number 1 ; gene_id "RALY--TTR^TTR^ENSG00000118271.12" ; gene_name TTR ; gene_type protein_coding ; havana_gene "OTTHUMG00000131984.4" ; havana_transcript "OTTHUMT00000254948.1" ; hgnc_id "HGNC:12405" ; level 2 ; orig_coord_info "chr18,31591903,31591971,+" ; protein_id "ENSP00000237014.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "RALY--TTR^ENST00000237014.8" ; transcript_name "TTR-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
RALY--TTR HAVANA gene 1266 18053 . + . FI_gene_label "RALY^ENSG00000125970.12" ; ID "RALY--TTR^RALY^ENSG00000125970.12" ; ccdsid "CCDS13230.1" ; exon_id "ENSE00000860072.1" ; exon_number 3 ; gene_id "RALY--TTR^RALY^ENSG00000125970.12" ; gene_name RALY ; gene_type protein_coding ; havana_gene "OTTHUMG00000032283.4" ; havana_transcript "OTTHUMT00000078753.3" ; hgnc_id "HGNC:15921" ; level 2 ; orig_coord_info "chr20,34072075,34072330,+" ; protein_id "ENSP00000246194.3" ; tag basic MANE_Select appris_principal_3 CCDS ; transcript_id "RALY--TTR^ENST00000246194.8" ; transcript_name "RALY-201" ; transcript_support_level 1 ; transcript_type protein_coding
RALY--TTR HAVANA mRNA 1266 18053 . + . FI_gene_label "RALY^ENSG00000125970.12" ; ID "RALY--TTR^ENST00000246194.8" ; Parent "RALY--TTR^RALY^ENSG00000125970.12" ; ccdsid "CCDS13230.1" ; exon_id "ENSE00000860072.1" ; exon_number 3 ; gene_id "RALY--TTR^RALY^ENSG00000125970.12" ; gene_name RALY ; gene_type protein_coding ; havana_gene "OTTHUMG00000032283.4" ; havana_transcript "OTTHUMT00000078753.3" ; hgnc_id "HGNC:15921" ; level 2 ; orig_coord_info "chr20,34072075,34072330,+" ; protein_id "ENSP00000246194.3" ; tag basic MANE_Select appris_principal_3 CCDS ; transcript_id "RALY--TTR^ENST00000246194.8" ; transcript_name "RALY-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
RPS6KB1--BCAS3 HAVANA gene 1076 21996 . + . FI_gene_label "RPS6KB1^ENSG00000108443.14" ; ID "RPS6KB1--BCAS3^RPS6KB1^ENSG00000108443.14" ; ccdsid "CCDS11621.1" ; exon_id "ENSE00001823154.2" ; exon_number 1 ; gene_id "RPS6KB1--BCAS3^RPS6KB1^ENSG00000108443.14" ; gene_name RPS6KB1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150642.5" ; havana_transcript "OTTHUMT00000319324.2" ; hgnc_id "HGNC:10436" ; level 2 ; orig_coord_info "chr17,59893185,59893325,+" ; protein_id "ENSP00000225577.4" ; tag basic MANE_Select appris_principal_4 CCDS ; transcript_id "RPS6KB1--BCAS3^ENST00000225577.9" ; transcript_name "RPS6KB1-201" ; transcript_support_level 1 ; transcript_type protein_coding
RPS6KB1--BCAS3 HAVANA mRNA 1076 21996 . + . FI_gene_label "RPS6KB1^ENSG00000108443.14" ; ID "RPS6KB1--BCAS3^ENST00000225577.9" ; Parent "RPS6KB1--BCAS3^RPS6KB1^ENSG00000108443.14" ; ccdsid "CCDS11621.1" ; exon_id "ENSE00001823154.2" ; exon_number 1 ; gene_id "RPS6KB1--BCAS3^RPS6KB1^ENSG00000108443.14" ; gene_name RPS6KB1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150642.5" ; havana_transcript "OTTHUMT00000319324.2" ; hgnc_id "HGNC:10436" ; level 2 ; orig_coord_info "chr17,59893185,59893325,+" ; protein_id "ENSP00000225577.4" ; tag basic MANE_Select appris_principal_4 CCDS ; transcript_id "RPS6KB1--BCAS3^ENST00000225577.9" ; transcript_name "RPS6KB1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
RPS6KB1--BCAS3 HAVANA gene 25433 80524 . + . FI_gene_label "BCAS3^ENSG00000141376.23" ; ID "RPS6KB1--BCAS3^BCAS3^ENSG00000141376.23" ; ccdsid "CCDS45749.1" ; exon_id "ENSE00003693165.1" ; exon_number 2 ; gene_id "RPS6KB1--BCAS3^BCAS3^ENSG00000141376.23" ; gene_name BCAS3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000180064.2" ; havana_transcript "OTTHUMT00000449578.1" ; hgnc_id "HGNC:14347" ; level 2 ; orig_coord_info "chr17,60679458,60679540,+" ; protein_id "ENSP00000375067.4" ; tag basic CCDS ; transcript_id "RPS6KB1--BCAS3^ENST00000390652.9" ; transcript_name "BCAS3-201" ; transcript_support_level 1 ; transcript_type protein_coding
RPS6KB1--BCAS3 HAVANA mRNA 25433 80524 . + . FI_gene_label "BCAS3^ENSG00000141376.23" ; ID "RPS6KB1--BCAS3^ENST00000390652.9" ; Parent "RPS6KB1--BCAS3^BCAS3^ENSG00000141376.23" ; ccdsid "CCDS45749.1" ; exon_id "ENSE00003693165.1" ; exon_number 2 ; gene_id "RPS6KB1--BCAS3^BCAS3^ENSG00000141376.23" ; gene_name BCAS3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000180064.2" ; havana_transcript "OTTHUMT00000449578.1" ; hgnc_id "HGNC:14347" ; level 2 ; orig_coord_info "chr17,60679458,60679540,+" ; protein_id "ENSP00000375067.4" ; tag basic CCDS ; transcript_id "RPS6KB1--BCAS3^ENST00000390652.9" ; transcript_name "BCAS3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SCARF2--SMPD4P1 HAVANA gene 1002 8861 . + . FI_gene_label "SCARF2^ENSG00000244486.9" ; ID "SCARF2--SMPD4P1^SCARF2^ENSG00000244486.9" ; ccdsid "CCDS46666.1" ; exon_id "ENSE00003736721.2" ; exon_number 1 ; gene_id "SCARF2--SMPD4P1^SCARF2^ENSG00000244486.9" ; gene_name SCARF2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150779.5" ; havana_transcript "OTTHUMT00000320048.4" ; hgnc_id "HGNC:19869" ; level 2 ; orig_coord_info "chr22,20437582,20437754,-" ; protein_id "ENSP00000477564.2" ; tag basic MANE_Select appris_principal_4 CCDS ; transcript_id "SCARF2--SMPD4P1^ENST00000622235.5" ; transcript_name "SCARF2-202" ; transcript_support_level 1 ; transcript_type protein_coding
SCARF2--SMPD4P1 HAVANA mRNA 1002 8861 . + . FI_gene_label "SCARF2^ENSG00000244486.9" ; ID "SCARF2--SMPD4P1^ENST00000622235.5" ; Parent "SCARF2--SMPD4P1^SCARF2^ENSG00000244486.9" ; ccdsid "CCDS46666.1" ; exon_id "ENSE00003736721.2" ; exon_number 1 ; gene_id "SCARF2--SMPD4P1^SCARF2^ENSG00000244486.9" ; gene_name SCARF2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150779.5" ; havana_transcript "OTTHUMT00000320048.4" ; hgnc_id "HGNC:19869" ; level 2 ; orig_coord_info "chr22,20437582,20437754,-" ; protein_id "ENSP00000477564.2" ; tag basic MANE_Select appris_principal_4 CCDS ; transcript_id "SCARF2--SMPD4P1^ENST00000622235.5" ; transcript_name "SCARF2-202" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SESTD1--COL14A1 ENSEMBL gene 63176 90839 . + . FI_gene_label "COL14A1^ENSG00000187955.12" ; ID "SESTD1--COL14A1^COL14A1^ENSG00000187955.12" ; exon_id "ENSE00003734994.1" ; exon_number 5 ; gene_id "SESTD1--COL14A1^COL14A1^ENSG00000187955.12" ; gene_name COL14A1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000149877.5" ; hgnc_id "HGNC:2191" ; level 3 ; orig_coord_info "chr8,120270074,120270100,+" ; protein_id "ENSP00000247781.4" ; tag basic ; transcript_id "SESTD1--COL14A1^ENST00000247781.4" ; transcript_name "COL14A1-201" ; transcript_support_level 5 ; transcript_type protein_coding
SESTD1--COL14A1 ENSEMBL mRNA 63176 90839 . + . FI_gene_label "COL14A1^ENSG00000187955.12" ; ID "SESTD1--COL14A1^ENST00000247781.4" ; Parent "SESTD1--COL14A1^COL14A1^ENSG00000187955.12" ; exon_id "ENSE00003734994.1" ; exon_number 5 ; gene_id "SESTD1--COL14A1^COL14A1^ENSG00000187955.12" ; gene_name COL14A1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000149877.5" ; hgnc_id "HGNC:2191" ; level 3 ; orig_coord_info "chr8,120270074,120270100,+" ; protein_id "ENSP00000247781.4" ; tag basic ; transcript_id "SESTD1--COL14A1^ENST00000247781.4" ; transcript_name "COL14A1-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
SESTD1--COL14A1 HAVANA gene 10460 23231 . + . FI_gene_label "SESTD1^ENSG00000187231.14" ; ID "SESTD1--COL14A1^SESTD1^ENSG00000187231.14" ; exon_id "ENSE00001667596.1" ; exon_number 1 ; gene_id "SESTD1--COL14A1^SESTD1^ENSG00000187231.14" ; gene_name SESTD1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000154554.6" ; havana_transcript "OTTHUMT00000335917.1" ; hgnc_id "HGNC:18379" ; level 2 ; orig_coord_info "chr2,179149297,179149381,-" ; protein_id "ENSP00000334183.5" ; tag mRNA_start_NF cds_start_NF not_organism_supported ; transcript_id "SESTD1--COL14A1^ENST00000335289.5" ; transcript_name "SESTD1-201" ; transcript_support_level 5 ; transcript_type nonsense_mediated_decay
SESTD1--COL14A1 HAVANA mRNA 10460 23231 . + . FI_gene_label "SESTD1^ENSG00000187231.14" ; ID "SESTD1--COL14A1^ENST00000335289.5" ; Parent "SESTD1--COL14A1^SESTD1^ENSG00000187231.14" ; exon_id "ENSE00001667596.1" ; exon_number 1 ; gene_id "SESTD1--COL14A1^SESTD1^ENSG00000187231.14" ; gene_name SESTD1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000154554.6" ; havana_transcript "OTTHUMT00000335917.1" ; hgnc_id "HGNC:18379" ; level 2 ; orig_coord_info "chr2,179149297,179149381,-" ; protein_id "ENSP00000334183.5" ; tag mRNA_start_NF cds_start_NF not_organism_supported ; transcript_id "SESTD1--COL14A1^ENST00000335289.5" ; transcript_name "SESTD1-201" ; transcript_support_level 5 ; transcript_type nonsense_mediated_decay
L1 and L2 created:
SHTN1--ATRNL1 ENSEMBL gene 3347 27352 . + . FI_gene_label "SHTN1^ENSG00000187164.20" ; ID "SHTN1--ATRNL1^SHTN1^ENSG00000187164.20" ; ccdsid "CCDS73207.1" ; exon_id "ENSE00003510445.1" ; exon_number 3 ; gene_id "SHTN1--ATRNL1^SHTN1^ENSG00000187164.20" ; gene_name SHTN1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000019114.5" ; hgnc_id "HGNC:29319" ; level 3 ; orig_coord_info "chr10,116960136,116960222,-" ; protein_id "ENSP00000260777.11" ; tag basic CCDS ; transcript_id "SHTN1--ATRNL1^ENST00000260777.14" ; transcript_name "SHTN1-201" ; transcript_support_level 2 ; transcript_type protein_coding
SHTN1--ATRNL1 ENSEMBL mRNA 3347 27352 . + . FI_gene_label "SHTN1^ENSG00000187164.20" ; ID "SHTN1--ATRNL1^ENST00000260777.14" ; Parent "SHTN1--ATRNL1^SHTN1^ENSG00000187164.20" ; ccdsid "CCDS73207.1" ; exon_id "ENSE00003510445.1" ; exon_number 3 ; gene_id "SHTN1--ATRNL1^SHTN1^ENSG00000187164.20" ; gene_name SHTN1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000019114.5" ; hgnc_id "HGNC:29319" ; level 3 ; orig_coord_info "chr10,116960136,116960222,-" ; protein_id "ENSP00000260777.11" ; tag basic CCDS ; transcript_id "SHTN1--ATRNL1^ENST00000260777.14" ; transcript_name "SHTN1-201" ; transcript_support_level 2 ; transcript_type protein_coding
L1 and L2 created:
SHTN1--ATRNL1 HAVANA gene 32253 75712 . + . FI_gene_label "ATRNL1^ENSG00000107518.18" ; ID "SHTN1--ATRNL1^ATRNL1^ENSG00000107518.18" ; ccdsid "CCDS7592.1" ; exon_id "ENSE00003703573.1" ; exon_number 1 ; gene_id "SHTN1--ATRNL1^ATRNL1^ENSG00000107518.18" ; gene_name ATRNL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000019096.13" ; havana_transcript "OTTHUMT00000050507.4" ; hgnc_id "HGNC:29063" ; level 2 ; orig_coord_info "chr10,115093751,115094043,+" ; protein_id "ENSP00000347152.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SHTN1--ATRNL1^ENST00000355044.8" ; transcript_name "ATRNL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
SHTN1--ATRNL1 HAVANA mRNA 32253 75712 . + . FI_gene_label "ATRNL1^ENSG00000107518.18" ; ID "SHTN1--ATRNL1^ENST00000355044.8" ; Parent "SHTN1--ATRNL1^ATRNL1^ENSG00000107518.18" ; ccdsid "CCDS7592.1" ; exon_id "ENSE00003703573.1" ; exon_number 1 ; gene_id "SHTN1--ATRNL1^ATRNL1^ENSG00000107518.18" ; gene_name ATRNL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000019096.13" ; havana_transcript "OTTHUMT00000050507.4" ; hgnc_id "HGNC:29063" ; level 2 ; orig_coord_info "chr10,115093751,115094043,+" ; protein_id "ENSP00000347152.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SHTN1--ATRNL1^ENST00000355044.8" ; transcript_name "ATRNL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SKAP1--CACNB1 HAVANA gene 1062 18023 . + . FI_gene_label "SKAP1^ENSG00000141293.16" ; ID "SKAP1--CACNB1^SKAP1^ENSG00000141293.16" ; ccdsid "CCDS32674.1" ; exon_id "ENSE00002733332.2" ; exon_number 1 ; gene_id "SKAP1--CACNB1^SKAP1^ENSG00000141293.16" ; gene_name SKAP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178823.3" ; havana_transcript "OTTHUMT00000443432.2" ; hgnc_id "HGNC:15605" ; level 2 ; orig_coord_info "chr17,48430075,48430120,-" ; protein_id "ENSP00000338171.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SKAP1--CACNB1^ENST00000336915.11" ; transcript_name "SKAP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
SKAP1--CACNB1 HAVANA mRNA 1062 18023 . + . FI_gene_label "SKAP1^ENSG00000141293.16" ; ID "SKAP1--CACNB1^ENST00000336915.11" ; Parent "SKAP1--CACNB1^SKAP1^ENSG00000141293.16" ; ccdsid "CCDS32674.1" ; exon_id "ENSE00002733332.2" ; exon_number 1 ; gene_id "SKAP1--CACNB1^SKAP1^ENSG00000141293.16" ; gene_name SKAP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178823.3" ; havana_transcript "OTTHUMT00000443432.2" ; hgnc_id "HGNC:15605" ; level 2 ; orig_coord_info "chr17,48430075,48430120,-" ; protein_id "ENSP00000338171.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SKAP1--CACNB1^ENST00000336915.11" ; transcript_name "SKAP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SKAP1--CACNB1 HAVANA gene 21024 33135 . + . FI_gene_label "CACNB1^ENSG00000067191.16" ; ID "SKAP1--CACNB1^CACNB1^ENSG00000067191.16" ; ccdsid "CCDS11334.1" ; exon_id "ENSE00002703065.1" ; exon_number 1 ; gene_id "SKAP1--CACNB1^CACNB1^ENSG00000067191.16" ; gene_name CACNB1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000133217.5" ; havana_transcript "OTTHUMT00000256946.2" ; hgnc_id "HGNC:1401" ; level 2 ; orig_coord_info "chr17,39197412,39197495,-" ; protein_id "ENSP00000345461.5" ; tag basic appris_alternative_1 CCDS ; transcript_id "SKAP1--CACNB1^ENST00000344140.5" ; transcript_name "CACNB1-201" ; transcript_support_level 1 ; transcript_type protein_coding
SKAP1--CACNB1 HAVANA mRNA 21024 33135 . + . FI_gene_label "CACNB1^ENSG00000067191.16" ; ID "SKAP1--CACNB1^ENST00000344140.5" ; Parent "SKAP1--CACNB1^CACNB1^ENSG00000067191.16" ; ccdsid "CCDS11334.1" ; exon_id "ENSE00002703065.1" ; exon_number 1 ; gene_id "SKAP1--CACNB1^CACNB1^ENSG00000067191.16" ; gene_name CACNB1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000133217.5" ; havana_transcript "OTTHUMT00000256946.2" ; hgnc_id "HGNC:1401" ; level 2 ; orig_coord_info "chr17,39197412,39197495,-" ; protein_id "ENSP00000345461.5" ; tag basic appris_alternative_1 CCDS ; transcript_id "SKAP1--CACNB1^ENST00000344140.5" ; transcript_name "CACNB1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SKAP1--GOSR2 HAVANA gene 21069 34641 . + . FI_gene_label "GOSR2^ENSG00000108433.17" ; ID "SKAP1--GOSR2^GOSR2^ENSG00000108433.17" ; ccdsid "CCDS11507.1" ; exon_id "ENSE00003810902.1" ; exon_number 1 ; gene_id "SKAP1--GOSR2^GOSR2^ENSG00000108433.17" ; gene_name GOSR2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178080.8" ; havana_transcript "OTTHUMT00000440442.2" ; hgnc_id "HGNC:4431" ; level 2 ; orig_coord_info "chr17,46923193,46923221,+" ; protein_id "ENSP00000225567.4" ; tag basic CCDS ; transcript_id "SKAP1--GOSR2^ENST00000225567.9" ; transcript_name "GOSR2-201" ; transcript_support_level 1 ; transcript_type protein_coding
SKAP1--GOSR2 HAVANA mRNA 21069 34641 . + . FI_gene_label "GOSR2^ENSG00000108433.17" ; ID "SKAP1--GOSR2^ENST00000225567.9" ; Parent "SKAP1--GOSR2^GOSR2^ENSG00000108433.17" ; ccdsid "CCDS11507.1" ; exon_id "ENSE00003810902.1" ; exon_number 1 ; gene_id "SKAP1--GOSR2^GOSR2^ENSG00000108433.17" ; gene_name GOSR2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178080.8" ; havana_transcript "OTTHUMT00000440442.2" ; hgnc_id "HGNC:4431" ; level 2 ; orig_coord_info "chr17,46923193,46923221,+" ; protein_id "ENSP00000225567.4" ; tag basic CCDS ; transcript_id "SKAP1--GOSR2^ENST00000225567.9" ; transcript_name "GOSR2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SKAP1--GOSR2 HAVANA gene 1062 18023 . + . FI_gene_label "SKAP1^ENSG00000141293.16" ; ID "SKAP1--GOSR2^SKAP1^ENSG00000141293.16" ; ccdsid "CCDS32674.1" ; exon_id "ENSE00002733332.2" ; exon_number 1 ; gene_id "SKAP1--GOSR2^SKAP1^ENSG00000141293.16" ; gene_name SKAP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178823.3" ; havana_transcript "OTTHUMT00000443432.2" ; hgnc_id "HGNC:15605" ; level 2 ; orig_coord_info "chr17,48430075,48430120,-" ; protein_id "ENSP00000338171.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SKAP1--GOSR2^ENST00000336915.11" ; transcript_name "SKAP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
SKAP1--GOSR2 HAVANA mRNA 1062 18023 . + . FI_gene_label "SKAP1^ENSG00000141293.16" ; ID "SKAP1--GOSR2^ENST00000336915.11" ; Parent "SKAP1--GOSR2^SKAP1^ENSG00000141293.16" ; ccdsid "CCDS32674.1" ; exon_id "ENSE00002733332.2" ; exon_number 1 ; gene_id "SKAP1--GOSR2^SKAP1^ENSG00000141293.16" ; gene_name SKAP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178823.3" ; havana_transcript "OTTHUMT00000443432.2" ; hgnc_id "HGNC:15605" ; level 2 ; orig_coord_info "chr17,48430075,48430120,-" ; protein_id "ENSP00000338171.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SKAP1--GOSR2^ENST00000336915.11" ; transcript_name "SKAP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SLC5A4P1--OR8A1 HAVANA gene 5658 7035 . + . FI_gene_label "OR8A1^ENSG00000196119.8" ; ID "SLC5A4P1--OR8A1^OR8A1^ENSG00000196119.8" ; exon_id "ENSE00001014261.5" ; exon_number 1 ; gene_id "SLC5A4P1--OR8A1^OR8A1^ENSG00000196119.8" ; gene_name OR8A1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000165923.3" ; havana_transcript "OTTHUMT00000387062.3" ; hgnc_id "HGNC:8469" ; level 2 ; orig_coord_info "chr11,124570120,124571046,+" ; protein_id "ENSP00000284287.4" ; tag basic MANE_Select appris_principal_1 ; transcript_id "SLC5A4P1--OR8A1^ENST00000284287.6" ; transcript_name "OR8A1-201" ; transcript_support_level NA ; transcript_type protein_coding
SLC5A4P1--OR8A1 HAVANA mRNA 5658 7035 . + . FI_gene_label "OR8A1^ENSG00000196119.8" ; ID "SLC5A4P1--OR8A1^ENST00000284287.6" ; Parent "SLC5A4P1--OR8A1^OR8A1^ENSG00000196119.8" ; exon_id "ENSE00001014261.5" ; exon_number 1 ; gene_id "SLC5A4P1--OR8A1^OR8A1^ENSG00000196119.8" ; gene_name OR8A1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000165923.3" ; havana_transcript "OTTHUMT00000387062.3" ; hgnc_id "HGNC:8469" ; level 2 ; orig_coord_info "chr11,124570120,124571046,+" ; protein_id "ENSP00000284287.4" ; tag basic MANE_Select appris_principal_1 ; transcript_id "SLC5A4P1--OR8A1^ENST00000284287.6" ; transcript_name "OR8A1-201" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
SMURF2--GDPD1 HAVANA gene 1001 27278 . + . FI_gene_label "SMURF2^ENSG00000108854.16" ; ID "SMURF2--GDPD1^SMURF2^ENSG00000108854.16" ; ccdsid "CCDS32707.1" ; exon_id "ENSE00001331843.8" ; exon_number 1 ; gene_id "SMURF2--GDPD1^SMURF2^ENSG00000108854.16" ; gene_name SMURF2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179189.3" ; havana_transcript "OTTHUMT00000445227.2" ; hgnc_id "HGNC:16809" ; level 2 ; orig_coord_info "chr17,64661829,64661880,-" ; protein_id "ENSP00000262435.9" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SMURF2--GDPD1^ENST00000262435.14" ; transcript_name "SMURF2-201" ; transcript_support_level 1 ; transcript_type protein_coding
SMURF2--GDPD1 HAVANA mRNA 1001 27278 . + . FI_gene_label "SMURF2^ENSG00000108854.16" ; ID "SMURF2--GDPD1^ENST00000262435.14" ; Parent "SMURF2--GDPD1^SMURF2^ENSG00000108854.16" ; ccdsid "CCDS32707.1" ; exon_id "ENSE00001331843.8" ; exon_number 1 ; gene_id "SMURF2--GDPD1^SMURF2^ENSG00000108854.16" ; gene_name SMURF2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179189.3" ; havana_transcript "OTTHUMT00000445227.2" ; hgnc_id "HGNC:16809" ; level 2 ; orig_coord_info "chr17,64661829,64661880,-" ; protein_id "ENSP00000262435.9" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SMURF2--GDPD1^ENST00000262435.14" ; transcript_name "SMURF2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SMURF2--GDPD1 HAVANA gene 30323 42330 . + . FI_gene_label "GDPD1^ENSG00000153982.11" ; ID "SMURF2--GDPD1^GDPD1^ENSG00000153982.11" ; ccdsid "CCDS11616.1" ; exon_id "ENSE00002705847.2" ; exon_number 1 ; gene_id "SMURF2--GDPD1^GDPD1^ENSG00000153982.11" ; gene_name GDPD1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179376.2" ; havana_transcript "OTTHUMT00000446024.2" ; hgnc_id "HGNC:20883" ; level 2 ; orig_coord_info "chr17,59220610,59220751,+" ; protein_id "ENSP00000284116.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SMURF2--GDPD1^ENST00000284116.9" ; transcript_name "GDPD1-201" ; transcript_support_level 1 ; transcript_type protein_coding
SMURF2--GDPD1 HAVANA mRNA 30323 42330 . + . FI_gene_label "GDPD1^ENSG00000153982.11" ; ID "SMURF2--GDPD1^ENST00000284116.9" ; Parent "SMURF2--GDPD1^GDPD1^ENSG00000153982.11" ; ccdsid "CCDS11616.1" ; exon_id "ENSE00002705847.2" ; exon_number 1 ; gene_id "SMURF2--GDPD1^GDPD1^ENSG00000153982.11" ; gene_name GDPD1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179376.2" ; havana_transcript "OTTHUMT00000446024.2" ; hgnc_id "HGNC:20883" ; level 2 ; orig_coord_info "chr17,59220610,59220751,+" ; protein_id "ENSP00000284116.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SMURF2--GDPD1^ENST00000284116.9" ; transcript_name "GDPD1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SP2--VEZF1 HAVANA gene 20335 28044 . + . FI_gene_label "VEZF1^ENSG00000136451.9" ; ID "SP2--VEZF1^VEZF1^ENSG00000136451.9" ; exon_id "ENSE00002709698.1" ; exon_number 1 ; gene_id "SP2--VEZF1^VEZF1^ENSG00000136451.9" ; gene_name VEZF1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178777.6" ; havana_transcript "OTTHUMT00000445408.2" ; hgnc_id "HGNC:12949" ; level 2 ; orig_coord_info "chr17,57982699,57982864,-" ; protein_id "ENSP00000258963.3" ; tag mRNA_start_NF cds_start_NF ; transcript_id "SP2--VEZF1^ENST00000258963.7" ; transcript_name "VEZF1-201" ; transcript_support_level 1 ; transcript_type protein_coding
SP2--VEZF1 HAVANA mRNA 20335 28044 . + . FI_gene_label "VEZF1^ENSG00000136451.9" ; ID "SP2--VEZF1^ENST00000258963.7" ; Parent "SP2--VEZF1^VEZF1^ENSG00000136451.9" ; exon_id "ENSE00002709698.1" ; exon_number 1 ; gene_id "SP2--VEZF1^VEZF1^ENSG00000136451.9" ; gene_name VEZF1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178777.6" ; havana_transcript "OTTHUMT00000445408.2" ; hgnc_id "HGNC:12949" ; level 2 ; orig_coord_info "chr17,57982699,57982864,-" ; protein_id "ENSP00000258963.3" ; tag mRNA_start_NF cds_start_NF ; transcript_id "SP2--VEZF1^ENST00000258963.7" ; transcript_name "VEZF1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SP2--VEZF1 HAVANA gene 1087 13733 . + . FI_gene_label "SP2^ENSG00000167182.15" ; ID "SP2--VEZF1^SP2^ENSG00000167182.15" ; ccdsid "CCDS11521.2" ; exon_id "ENSE00002729406.2" ; exon_number 1 ; gene_id "SP2--VEZF1^SP2^ENSG00000167182.15" ; gene_name SP2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150196.4" ; havana_transcript "OTTHUMT00000316777.3" ; hgnc_id "HGNC:11207" ; level 2 ; orig_coord_info "chr17,47896287,47896293,+" ; protein_id "ENSP00000365931.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SP2--VEZF1^ENST00000376741.5" ; transcript_name "SP2-201" ; transcript_support_level 1 ; transcript_type protein_coding
SP2--VEZF1 HAVANA mRNA 1087 13733 . + . FI_gene_label "SP2^ENSG00000167182.15" ; ID "SP2--VEZF1^ENST00000376741.5" ; Parent "SP2--VEZF1^SP2^ENSG00000167182.15" ; ccdsid "CCDS11521.2" ; exon_id "ENSE00002729406.2" ; exon_number 1 ; gene_id "SP2--VEZF1^SP2^ENSG00000167182.15" ; gene_name SP2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150196.4" ; havana_transcript "OTTHUMT00000316777.3" ; hgnc_id "HGNC:11207" ; level 2 ; orig_coord_info "chr17,47896287,47896293,+" ; protein_id "ENSP00000365931.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SP2--VEZF1^ENST00000376741.5" ; transcript_name "SP2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SPAG9--MMD HAVANA gene 1001 43513 . + . FI_gene_label "SPAG9^ENSG00000008294.21" ; ID "SPAG9--MMD^SPAG9^ENSG00000008294.21" ; ccdsid "CCDS45740.1" ; exon_id "ENSE00003850676.1" ; exon_number 1 ; gene_id "SPAG9--MMD^SPAG9^ENSG00000008294.21" ; gene_name SPAG9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162316.7" ; havana_transcript "OTTHUMT00000368543.3" ; hgnc_id "HGNC:14524" ; level 2 ; orig_coord_info "chr17,51120354,51120656,-" ; protein_id "ENSP00000262013.7" ; tag basic MANE_Select appris_alternative_1 CCDS ; transcript_id "SPAG9--MMD^ENST00000262013.12" ; transcript_name "SPAG9-201" ; transcript_support_level 1 ; transcript_type protein_coding
SPAG9--MMD HAVANA mRNA 1001 43513 . + . FI_gene_label "SPAG9^ENSG00000008294.21" ; ID "SPAG9--MMD^ENST00000262013.12" ; Parent "SPAG9--MMD^SPAG9^ENSG00000008294.21" ; ccdsid "CCDS45740.1" ; exon_id "ENSE00003850676.1" ; exon_number 1 ; gene_id "SPAG9--MMD^SPAG9^ENSG00000008294.21" ; gene_name SPAG9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162316.7" ; havana_transcript "OTTHUMT00000368543.3" ; hgnc_id "HGNC:14524" ; level 2 ; orig_coord_info "chr17,51120354,51120656,-" ; protein_id "ENSP00000262013.7" ; tag basic MANE_Select appris_alternative_1 CCDS ; transcript_id "SPAG9--MMD^ENST00000262013.12" ; transcript_name "SPAG9-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SPAG9--MMD HAVANA gene 46603 57292 . + . FI_gene_label "MMD^ENSG00000108960.9" ; ID "SPAG9--MMD^MMD^ENSG00000108960.9" ; ccdsid "CCDS11586.1" ; exon_id "ENSE00003838127.1" ; exon_number 1 ; gene_id "SPAG9--MMD^MMD^ENSG00000108960.9" ; gene_name MMD ; gene_type protein_coding ; havana_gene "OTTHUMG00000177845.4" ; havana_transcript "OTTHUMT00000439214.2" ; hgnc_id "HGNC:7153" ; level 2 ; orig_coord_info "chr17,55421670,55421695,-" ; protein_id "ENSP00000262065.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SPAG9--MMD^ENST00000262065.8" ; transcript_name "MMD-201" ; transcript_support_level 1 ; transcript_type protein_coding
SPAG9--MMD HAVANA mRNA 46603 57292 . + . FI_gene_label "MMD^ENSG00000108960.9" ; ID "SPAG9--MMD^ENST00000262065.8" ; Parent "SPAG9--MMD^MMD^ENSG00000108960.9" ; ccdsid "CCDS11586.1" ; exon_id "ENSE00003838127.1" ; exon_number 1 ; gene_id "SPAG9--MMD^MMD^ENSG00000108960.9" ; gene_name MMD ; gene_type protein_coding ; havana_gene "OTTHUMG00000177845.4" ; havana_transcript "OTTHUMT00000439214.2" ; hgnc_id "HGNC:7153" ; level 2 ; orig_coord_info "chr17,55421670,55421695,-" ; protein_id "ENSP00000262065.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SPAG9--MMD^ENST00000262065.8" ; transcript_name "MMD-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SPAG9--VMP1 HAVANA gene 1001 43513 . + . FI_gene_label "SPAG9^ENSG00000008294.21" ; ID "SPAG9--VMP1^SPAG9^ENSG00000008294.21" ; ccdsid "CCDS45740.1" ; exon_id "ENSE00003850676.1" ; exon_number 1 ; gene_id "SPAG9--VMP1^SPAG9^ENSG00000008294.21" ; gene_name SPAG9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162316.7" ; havana_transcript "OTTHUMT00000368543.3" ; hgnc_id "HGNC:14524" ; level 2 ; orig_coord_info "chr17,51120354,51120656,-" ; protein_id "ENSP00000262013.7" ; tag basic MANE_Select appris_alternative_1 CCDS ; transcript_id "SPAG9--VMP1^ENST00000262013.12" ; transcript_name "SPAG9-201" ; transcript_support_level 1 ; transcript_type protein_coding
SPAG9--VMP1 HAVANA mRNA 1001 43513 . + . FI_gene_label "SPAG9^ENSG00000008294.21" ; ID "SPAG9--VMP1^ENST00000262013.12" ; Parent "SPAG9--VMP1^SPAG9^ENSG00000008294.21" ; ccdsid "CCDS45740.1" ; exon_id "ENSE00003850676.1" ; exon_number 1 ; gene_id "SPAG9--VMP1^SPAG9^ENSG00000008294.21" ; gene_name SPAG9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162316.7" ; havana_transcript "OTTHUMT00000368543.3" ; hgnc_id "HGNC:14524" ; level 2 ; orig_coord_info "chr17,51120354,51120656,-" ; protein_id "ENSP00000262013.7" ; tag basic MANE_Select appris_alternative_1 CCDS ; transcript_id "SPAG9--VMP1^ENST00000262013.12" ; transcript_name "SPAG9-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SPAG9--VMP1 HAVANA gene 46976 65678 . + . FI_gene_label "VMP1^ENSG00000062716.13" ; ID "SPAG9--VMP1^VMP1^ENSG00000062716.13" ; ccdsid "CCDS11619.1" ; exon_id "ENSE00003550286.1" ; exon_number 2 ; gene_id "SPAG9--VMP1^VMP1^ENSG00000062716.13" ; gene_name VMP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179882.4" ; havana_transcript "OTTHUMT00000448793.2" ; hgnc_id "HGNC:29559" ; level 2 ; orig_coord_info "chr17,59731447,59731522,+" ; protein_id "ENSP00000262291.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SPAG9--VMP1^ENST00000262291.9" ; transcript_name "VMP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
SPAG9--VMP1 HAVANA mRNA 46976 65678 . + . FI_gene_label "VMP1^ENSG00000062716.13" ; ID "SPAG9--VMP1^ENST00000262291.9" ; Parent "SPAG9--VMP1^VMP1^ENSG00000062716.13" ; ccdsid "CCDS11619.1" ; exon_id "ENSE00003550286.1" ; exon_number 2 ; gene_id "SPAG9--VMP1^VMP1^ENSG00000062716.13" ; gene_name VMP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179882.4" ; havana_transcript "OTTHUMT00000448793.2" ; hgnc_id "HGNC:29559" ; level 2 ; orig_coord_info "chr17,59731447,59731522,+" ; protein_id "ENSP00000262291.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SPAG9--VMP1^ENST00000262291.9" ; transcript_name "VMP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SPATA6--UQCRC2 HAVANA gene 26012 42360 . + . FI_gene_label "UQCRC2^ENSG00000140740.11" ; ID "SPATA6--UQCRC2^UQCRC2^ENSG00000140740.11" ; ccdsid "CCDS10601.1" ; exon_id "ENSE00003894159.1" ; exon_number 1 ; gene_id "SPATA6--UQCRC2^UQCRC2^ENSG00000140740.11" ; gene_name UQCRC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000131585.4" ; havana_transcript "OTTHUMT00000254466.2" ; hgnc_id "HGNC:12586" ; level 2 ; orig_coord_info "chr16,21953424,21953456,+" ; protein_id "ENSP00000268379.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SPATA6--UQCRC2^ENST00000268379.9" ; transcript_name "UQCRC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
SPATA6--UQCRC2 HAVANA mRNA 26012 42360 . + . FI_gene_label "UQCRC2^ENSG00000140740.11" ; ID "SPATA6--UQCRC2^ENST00000268379.9" ; Parent "SPATA6--UQCRC2^UQCRC2^ENSG00000140740.11" ; ccdsid "CCDS10601.1" ; exon_id "ENSE00003894159.1" ; exon_number 1 ; gene_id "SPATA6--UQCRC2^UQCRC2^ENSG00000140740.11" ; gene_name UQCRC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000131585.4" ; havana_transcript "OTTHUMT00000254466.2" ; hgnc_id "HGNC:12586" ; level 2 ; orig_coord_info "chr16,21953424,21953456,+" ; protein_id "ENSP00000268379.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "SPATA6--UQCRC2^ENST00000268379.9" ; transcript_name "UQCRC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SPATA6--UQCRC2 HAVANA gene 9970 18405 . + . FI_gene_label "SPATA6^ENSG00000132122.12" ; ID "SPATA6--UQCRC2^SPATA6^ENSG00000132122.12" ; exon_id "ENSE00001456282.1" ; exon_number 1 ; gene_id "SPATA6--UQCRC2^SPATA6^ENSG00000132122.12" ; gene_name SPATA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000007794.5" ; havana_transcript "OTTHUMT00000021351.2" ; hgnc_id "HGNC:18309" ; level 2 ; orig_coord_info "chr1,48400773,48400781,-" ; protein_id "ENSP00000360907.1" ; tag mRNA_end_NF cds_end_NF ; transcript_id "SPATA6--UQCRC2^ENST00000371841.1" ; transcript_name "SPATA6-201" ; transcript_support_level 5 ; transcript_type protein_coding
SPATA6--UQCRC2 HAVANA mRNA 9970 18405 . + . FI_gene_label "SPATA6^ENSG00000132122.12" ; ID "SPATA6--UQCRC2^ENST00000371841.1" ; Parent "SPATA6--UQCRC2^SPATA6^ENSG00000132122.12" ; exon_id "ENSE00001456282.1" ; exon_number 1 ; gene_id "SPATA6--UQCRC2^SPATA6^ENSG00000132122.12" ; gene_name SPATA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000007794.5" ; havana_transcript "OTTHUMT00000021351.2" ; hgnc_id "HGNC:18309" ; level 2 ; orig_coord_info "chr1,48400773,48400781,-" ; protein_id "ENSP00000360907.1" ; tag mRNA_end_NF cds_end_NF ; transcript_id "SPATA6--UQCRC2^ENST00000371841.1" ; transcript_name "SPATA6-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
STRADA--LRRC37A3 HAVANA gene 1226 22018 . + . FI_gene_label "STRADA^ENSG00000266173.7" ; ID "STRADA--LRRC37A3^STRADA^ENSG00000266173.7" ; exon_id "ENSE00003556671.1" ; exon_number 4 ; gene_id "STRADA--LRRC37A3^STRADA^ENSG00000266173.7" ; gene_name STRADA ; gene_type protein_coding ; havana_gene "OTTHUMG00000178908.13" ; havana_transcript "OTTHUMT00000443889.2" ; hgnc_id "HGNC:30172" ; level 2 ; orig_coord_info "chr17,63714006,63714057,-" ; protein_id "ENSP00000245865.5" ; tag basic ; transcript_id "STRADA--LRRC37A3^ENST00000245865.10" ; transcript_name "STRADA-201" ; transcript_support_level 1 ; transcript_type protein_coding
STRADA--LRRC37A3 HAVANA mRNA 1226 22018 . + . FI_gene_label "STRADA^ENSG00000266173.7" ; ID "STRADA--LRRC37A3^ENST00000245865.10" ; Parent "STRADA--LRRC37A3^STRADA^ENSG00000266173.7" ; exon_id "ENSE00003556671.1" ; exon_number 4 ; gene_id "STRADA--LRRC37A3^STRADA^ENSG00000266173.7" ; gene_name STRADA ; gene_type protein_coding ; havana_gene "OTTHUMG00000178908.13" ; havana_transcript "OTTHUMT00000443889.2" ; hgnc_id "HGNC:30172" ; level 2 ; orig_coord_info "chr17,63714006,63714057,-" ; protein_id "ENSP00000245865.5" ; tag basic ; transcript_id "STRADA--LRRC37A3^ENST00000245865.10" ; transcript_name "STRADA-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
STRADA--LRRC37A3 ENSEMBL gene 33311 50273 . + . FI_gene_label "LRRC37A3^ENSG00000176809.10" ; ID "STRADA--LRRC37A3^LRRC37A3^ENSG00000176809.10" ; ccdsid "CCDS32708.1" ; exon_id "ENSE00001399635.2" ; exon_number 1 ; gene_id "STRADA--LRRC37A3^LRRC37A3^ENSG00000176809.10" ; gene_name LRRC37A3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000132307.4" ; hgnc_id "HGNC:32427" ; level 3 ; orig_coord_info "chr17,64894649,64897257,-" ; protein_id "ENSP00000325713.5" ; tag basic appris_principal_1 CCDS ; transcript_id "STRADA--LRRC37A3^ENST00000319651.9" ; transcript_name "LRRC37A3-201" ; transcript_support_level 1 ; transcript_type protein_coding
STRADA--LRRC37A3 ENSEMBL mRNA 33311 50273 . + . FI_gene_label "LRRC37A3^ENSG00000176809.10" ; ID "STRADA--LRRC37A3^ENST00000319651.9" ; Parent "STRADA--LRRC37A3^LRRC37A3^ENSG00000176809.10" ; ccdsid "CCDS32708.1" ; exon_id "ENSE00001399635.2" ; exon_number 1 ; gene_id "STRADA--LRRC37A3^LRRC37A3^ENSG00000176809.10" ; gene_name LRRC37A3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000132307.4" ; hgnc_id "HGNC:32427" ; level 3 ; orig_coord_info "chr17,64894649,64897257,-" ; protein_id "ENSP00000325713.5" ; tag basic appris_principal_1 CCDS ; transcript_id "STRADA--LRRC37A3^ENST00000319651.9" ; transcript_name "LRRC37A3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
STX16--NPEPL1 HAVANA gene 1021 7754 . + . FI_gene_label "STX16^ENSG00000124222.22" ; ID "STX16--NPEPL1^STX16^ENSG00000124222.22" ; exon_id "ENSE00003459479.1" ; exon_number 3 ; gene_id "STX16--NPEPL1^STX16^ENSG00000124222.22" ; gene_name STX16 ; gene_type protein_coding ; havana_gene "OTTHUMG00000033084.8" ; havana_transcript "OTTHUMT00000267911.2" ; hgnc_id "HGNC:11431" ; level 2 ; orig_coord_info "chr20,58667505,58667597,+" ; protein_id "ENSP00000312086.8" ; tag alternative_5_UTR mRNA_end_NF cds_end_NF ; transcript_id "STX16--NPEPL1^ENST00000312283.12" ; transcript_name "STX16-201" ; transcript_support_level 3 ; transcript_type protein_coding
STX16--NPEPL1 HAVANA mRNA 1021 7754 . + . FI_gene_label "STX16^ENSG00000124222.22" ; ID "STX16--NPEPL1^ENST00000312283.12" ; Parent "STX16--NPEPL1^STX16^ENSG00000124222.22" ; exon_id "ENSE00003459479.1" ; exon_number 3 ; gene_id "STX16--NPEPL1^STX16^ENSG00000124222.22" ; gene_name STX16 ; gene_type protein_coding ; havana_gene "OTTHUMG00000033084.8" ; havana_transcript "OTTHUMT00000267911.2" ; hgnc_id "HGNC:11431" ; level 2 ; orig_coord_info "chr20,58667505,58667597,+" ; protein_id "ENSP00000312086.8" ; tag alternative_5_UTR mRNA_end_NF cds_end_NF ; transcript_id "STX16--NPEPL1^ENST00000312283.12" ; transcript_name "STX16-201" ; transcript_support_level 3 ; transcript_type protein_coding
L1 and L2 created:
STX16--NPEPL1 HAVANA gene 18353 29399 . + . FI_gene_label "NPEPL1^ENSG00000215440.12" ; ID "STX16--NPEPL1^NPEPL1^ENSG00000215440.12" ; ccdsid "CCDS46621.1" ; exon_id "ENSE00001408052.7" ; exon_number 1 ; gene_id "STX16--NPEPL1^NPEPL1^ENSG00000215440.12" ; gene_name NPEPL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000033060.8" ; havana_transcript "OTTHUMT00000080402.7" ; hgnc_id "HGNC:16244" ; level 2 ; orig_coord_info "chr20,58692901,58693050,+" ; protein_id "ENSP00000348395.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "STX16--NPEPL1^ENST00000356091.11" ; transcript_name "NPEPL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
STX16--NPEPL1 HAVANA mRNA 18353 29399 . + . FI_gene_label "NPEPL1^ENSG00000215440.12" ; ID "STX16--NPEPL1^ENST00000356091.11" ; Parent "STX16--NPEPL1^NPEPL1^ENSG00000215440.12" ; ccdsid "CCDS46621.1" ; exon_id "ENSE00001408052.7" ; exon_number 1 ; gene_id "STX16--NPEPL1^NPEPL1^ENSG00000215440.12" ; gene_name NPEPL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000033060.8" ; havana_transcript "OTTHUMT00000080402.7" ; hgnc_id "HGNC:16244" ; level 2 ; orig_coord_info "chr20,58692901,58693050,+" ; protein_id "ENSP00000348395.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "STX16--NPEPL1^ENST00000356091.11" ; transcript_name "NPEPL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
TANC2--AC018521.4 HAVANA gene 1005 42292 . + . FI_gene_label "TANC2^ENSG00000170921.15" ; ID "TANC2--AC018521.4^TANC2^ENSG00000170921.15" ; exon_id "ENSE00002709640.1" ; exon_number 1 ; gene_id "TANC2--AC018521.4^TANC2^ENSG00000170921.15" ; gene_name TANC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179103.2" ; havana_transcript "OTTHUMT00000444766.1" ; hgnc_id "HGNC:30212" ; level 2 ; orig_coord_info "chr17,63009560,63009626,+" ; protein_id "ENSP00000374171.4" ; tag basic appris_alternative_2 ; transcript_id "TANC2--AC018521.4^ENST00000389520.8" ; transcript_name "TANC2-201" ; transcript_support_level 5 ; transcript_type protein_coding
TANC2--AC018521.4 HAVANA mRNA 1005 42292 . + . FI_gene_label "TANC2^ENSG00000170921.15" ; ID "TANC2--AC018521.4^ENST00000389520.8" ; Parent "TANC2--AC018521.4^TANC2^ENSG00000170921.15" ; exon_id "ENSE00002709640.1" ; exon_number 1 ; gene_id "TANC2--AC018521.4^TANC2^ENSG00000170921.15" ; gene_name TANC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179103.2" ; havana_transcript "OTTHUMT00000444766.1" ; hgnc_id "HGNC:30212" ; level 2 ; orig_coord_info "chr17,63009560,63009626,+" ; protein_id "ENSP00000374171.4" ; tag basic appris_alternative_2 ; transcript_id "TANC2--AC018521.4^ENST00000389520.8" ; transcript_name "TANC2-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
TANC2--AC091180.4 HAVANA gene 1005 42292 . + . FI_gene_label "TANC2^ENSG00000170921.15" ; ID "TANC2--AC091180.4^TANC2^ENSG00000170921.15" ; exon_id "ENSE00002709640.1" ; exon_number 1 ; gene_id "TANC2--AC091180.4^TANC2^ENSG00000170921.15" ; gene_name TANC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179103.2" ; havana_transcript "OTTHUMT00000444766.1" ; hgnc_id "HGNC:30212" ; level 2 ; orig_coord_info "chr17,63009560,63009626,+" ; protein_id "ENSP00000374171.4" ; tag basic appris_alternative_2 ; transcript_id "TANC2--AC091180.4^ENST00000389520.8" ; transcript_name "TANC2-201" ; transcript_support_level 5 ; transcript_type protein_coding
TANC2--AC091180.4 HAVANA mRNA 1005 42292 . + . FI_gene_label "TANC2^ENSG00000170921.15" ; ID "TANC2--AC091180.4^ENST00000389520.8" ; Parent "TANC2--AC091180.4^TANC2^ENSG00000170921.15" ; exon_id "ENSE00002709640.1" ; exon_number 1 ; gene_id "TANC2--AC091180.4^TANC2^ENSG00000170921.15" ; gene_name TANC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179103.2" ; havana_transcript "OTTHUMT00000444766.1" ; hgnc_id "HGNC:30212" ; level 2 ; orig_coord_info "chr17,63009560,63009626,+" ; protein_id "ENSP00000374171.4" ; tag basic appris_alternative_2 ; transcript_id "TANC2--AC091180.4^ENST00000389520.8" ; transcript_name "TANC2-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
TANC2--AC091180.5 HAVANA gene 1005 42292 . + . FI_gene_label "TANC2^ENSG00000170921.15" ; ID "TANC2--AC091180.5^TANC2^ENSG00000170921.15" ; exon_id "ENSE00002709640.1" ; exon_number 1 ; gene_id "TANC2--AC091180.5^TANC2^ENSG00000170921.15" ; gene_name TANC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179103.2" ; havana_transcript "OTTHUMT00000444766.1" ; hgnc_id "HGNC:30212" ; level 2 ; orig_coord_info "chr17,63009560,63009626,+" ; protein_id "ENSP00000374171.4" ; tag basic appris_alternative_2 ; transcript_id "TANC2--AC091180.5^ENST00000389520.8" ; transcript_name "TANC2-201" ; transcript_support_level 5 ; transcript_type protein_coding
TANC2--AC091180.5 HAVANA mRNA 1005 42292 . + . FI_gene_label "TANC2^ENSG00000170921.15" ; ID "TANC2--AC091180.5^ENST00000389520.8" ; Parent "TANC2--AC091180.5^TANC2^ENSG00000170921.15" ; exon_id "ENSE00002709640.1" ; exon_number 1 ; gene_id "TANC2--AC091180.5^TANC2^ENSG00000170921.15" ; gene_name TANC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179103.2" ; havana_transcript "OTTHUMT00000444766.1" ; hgnc_id "HGNC:30212" ; level 2 ; orig_coord_info "chr17,63009560,63009626,+" ; protein_id "ENSP00000374171.4" ; tag basic appris_alternative_2 ; transcript_id "TANC2--AC091180.5^ENST00000389520.8" ; transcript_name "TANC2-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
TANC2--COPZ2 HAVANA gene 1005 42292 . + . FI_gene_label "TANC2^ENSG00000170921.15" ; ID "TANC2--COPZ2^TANC2^ENSG00000170921.15" ; exon_id "ENSE00002709640.1" ; exon_number 1 ; gene_id "TANC2--COPZ2^TANC2^ENSG00000170921.15" ; gene_name TANC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179103.2" ; havana_transcript "OTTHUMT00000444766.1" ; hgnc_id "HGNC:30212" ; level 2 ; orig_coord_info "chr17,63009560,63009626,+" ; protein_id "ENSP00000374171.4" ; tag basic appris_alternative_2 ; transcript_id "TANC2--COPZ2^ENST00000389520.8" ; transcript_name "TANC2-201" ; transcript_support_level 5 ; transcript_type protein_coding
TANC2--COPZ2 HAVANA mRNA 1005 42292 . + . FI_gene_label "TANC2^ENSG00000170921.15" ; ID "TANC2--COPZ2^ENST00000389520.8" ; Parent "TANC2--COPZ2^TANC2^ENSG00000170921.15" ; exon_id "ENSE00002709640.1" ; exon_number 1 ; gene_id "TANC2--COPZ2^TANC2^ENSG00000170921.15" ; gene_name TANC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179103.2" ; havana_transcript "OTTHUMT00000444766.1" ; hgnc_id "HGNC:30212" ; level 2 ; orig_coord_info "chr17,63009560,63009626,+" ; protein_id "ENSP00000374171.4" ; tag basic appris_alternative_2 ; transcript_id "TANC2--COPZ2^ENST00000389520.8" ; transcript_name "TANC2-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
TANC2--COPZ2 HAVANA gene 52888 55114 . + . FI_gene_label "COPZ2^ENSG00000005243.10" ; ID "TANC2--COPZ2^COPZ2^ENSG00000005243.10" ; exon_id "ENSE00002719831.1" ; exon_number 1 ; gene_id "TANC2--COPZ2^COPZ2^ENSG00000005243.10" ; gene_name COPZ2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178684.6" ; havana_transcript "OTTHUMT00000442956.1" ; hgnc_id "HGNC:19356" ; level 2 ; orig_coord_info "chr17,48033863,48033872,-" ; protein_id "ENSP00000463841.1" ; tag mRNA_start_NF cds_start_NF ; transcript_id "TANC2--COPZ2^ENST00000579263.1" ; transcript_name "COPZ2-201" ; transcript_support_level 3 ; transcript_type protein_coding
TANC2--COPZ2 HAVANA mRNA 52888 55114 . + . FI_gene_label "COPZ2^ENSG00000005243.10" ; ID "TANC2--COPZ2^ENST00000579263.1" ; Parent "TANC2--COPZ2^COPZ2^ENSG00000005243.10" ; exon_id "ENSE00002719831.1" ; exon_number 1 ; gene_id "TANC2--COPZ2^COPZ2^ENSG00000005243.10" ; gene_name COPZ2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178684.6" ; havana_transcript "OTTHUMT00000442956.1" ; hgnc_id "HGNC:19356" ; level 2 ; orig_coord_info "chr17,48033863,48033872,-" ; protein_id "ENSP00000463841.1" ; tag mRNA_start_NF cds_start_NF ; transcript_id "TANC2--COPZ2^ENST00000579263.1" ; transcript_name "COPZ2-201" ; transcript_support_level 3 ; transcript_type protein_coding
L1 and L2 created:
TEX2--BCAS3 HAVANA gene 1034 24053 . + . FI_gene_label "TEX2^ENSG00000136478.8" ; ID "TEX2--BCAS3^TEX2^ENSG00000136478.8" ; ccdsid "CCDS11658.1" ; exon_id "ENSE00001324420.1" ; exon_number 2 ; gene_id "TEX2--BCAS3^TEX2^ENSG00000136478.8" ; gene_name TEX2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178881.2" ; havana_transcript "OTTHUMT00000443743.1" ; hgnc_id "HGNC:30884" ; level 2 ; orig_coord_info "chr17,64212574,64214217,-" ; protein_id "ENSP00000258991.3" ; tag basic appris_alternative_2 CCDS ; transcript_id "TEX2--BCAS3^ENST00000258991.7" ; transcript_name "TEX2-201" ; transcript_support_level 1 ; transcript_type protein_coding
TEX2--BCAS3 HAVANA mRNA 1034 24053 . + . FI_gene_label "TEX2^ENSG00000136478.8" ; ID "TEX2--BCAS3^ENST00000258991.7" ; Parent "TEX2--BCAS3^TEX2^ENSG00000136478.8" ; ccdsid "CCDS11658.1" ; exon_id "ENSE00001324420.1" ; exon_number 2 ; gene_id "TEX2--BCAS3^TEX2^ENSG00000136478.8" ; gene_name TEX2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178881.2" ; havana_transcript "OTTHUMT00000443743.1" ; hgnc_id "HGNC:30884" ; level 2 ; orig_coord_info "chr17,64212574,64214217,-" ; protein_id "ENSP00000258991.3" ; tag basic appris_alternative_2 CCDS ; transcript_id "TEX2--BCAS3^ENST00000258991.7" ; transcript_name "TEX2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
TEX2--BCAS3 HAVANA gene 27490 82581 . + . FI_gene_label "BCAS3^ENSG00000141376.23" ; ID "TEX2--BCAS3^BCAS3^ENSG00000141376.23" ; ccdsid "CCDS45749.1" ; exon_id "ENSE00003693165.1" ; exon_number 2 ; gene_id "TEX2--BCAS3^BCAS3^ENSG00000141376.23" ; gene_name BCAS3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000180064.2" ; havana_transcript "OTTHUMT00000449578.1" ; hgnc_id "HGNC:14347" ; level 2 ; orig_coord_info "chr17,60679458,60679540,+" ; protein_id "ENSP00000375067.4" ; tag basic CCDS ; transcript_id "TEX2--BCAS3^ENST00000390652.9" ; transcript_name "BCAS3-201" ; transcript_support_level 1 ; transcript_type protein_coding
TEX2--BCAS3 HAVANA mRNA 27490 82581 . + . FI_gene_label "BCAS3^ENSG00000141376.23" ; ID "TEX2--BCAS3^ENST00000390652.9" ; Parent "TEX2--BCAS3^BCAS3^ENSG00000141376.23" ; ccdsid "CCDS45749.1" ; exon_id "ENSE00003693165.1" ; exon_number 2 ; gene_id "TEX2--BCAS3^BCAS3^ENSG00000141376.23" ; gene_name BCAS3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000180064.2" ; havana_transcript "OTTHUMT00000449578.1" ; hgnc_id "HGNC:14347" ; level 2 ; orig_coord_info "chr17,60679458,60679540,+" ; protein_id "ENSP00000375067.4" ; tag basic CCDS ; transcript_id "TEX2--BCAS3^ENST00000390652.9" ; transcript_name "BCAS3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
TLK2--FAM157A HAVANA gene 4784 35054 . + . FI_gene_label "TLK2^ENSG00000146872.18" ; ID "TLK2--FAM157A^TLK2^ENSG00000146872.18" ; ccdsid "CCDS62283.1" ; exon_id "ENSE00003568961.1" ; exon_number 2 ; gene_id "TLK2--FAM157A^TLK2^ENSG00000146872.18" ; gene_name TLK2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179176.3" ; havana_transcript "OTTHUMT00000445140.1" ; hgnc_id "HGNC:11842" ; level 2 ; orig_coord_info "chr17,62481126,62481206,+" ; protein_id "ENSP00000316512.9" ; tag basic CCDS ; transcript_id "TLK2--FAM157A^ENST00000326270.13" ; transcript_name "TLK2-201" ; transcript_support_level 1 ; transcript_type protein_coding
TLK2--FAM157A HAVANA mRNA 4784 35054 . + . FI_gene_label "TLK2^ENSG00000146872.18" ; ID "TLK2--FAM157A^ENST00000326270.13" ; Parent "TLK2--FAM157A^TLK2^ENSG00000146872.18" ; ccdsid "CCDS62283.1" ; exon_id "ENSE00003568961.1" ; exon_number 2 ; gene_id "TLK2--FAM157A^TLK2^ENSG00000146872.18" ; gene_name TLK2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179176.3" ; havana_transcript "OTTHUMT00000445140.1" ; hgnc_id "HGNC:11842" ; level 2 ; orig_coord_info "chr17,62481126,62481206,+" ; protein_id "ENSP00000316512.9" ; tag basic CCDS ; transcript_id "TLK2--FAM157A^ENST00000326270.13" ; transcript_name "TLK2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
TOX4--ABHD4 HAVANA gene 16181 23357 . + . FI_gene_label "ABHD4^ENSG00000100439.10" ; ID "TOX4--ABHD4^ABHD4^ENSG00000100439.10" ; exon_id "ENSE00002282278.2" ; exon_number 1 ; gene_id "TOX4--ABHD4^ABHD4^ENSG00000100439.10" ; gene_name ABHD4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000028686.7" ; havana_transcript "OTTHUMT00000474117.1" ; hgnc_id "HGNC:20154" ; level 2 ; orig_coord_info "chr14,22598307,22598329,+" ; protein_id "ENSP00000216327.7" ; tag NMD_likely_if_extended non_canonical_TEC not_organism_supported basic ; transcript_id "TOX4--ABHD4^ENST00000216327.10" ; transcript_name "ABHD4-201" ; transcript_support_level 5 ; transcript_type protein_coding
TOX4--ABHD4 HAVANA mRNA 16181 23357 . + . FI_gene_label "ABHD4^ENSG00000100439.10" ; ID "TOX4--ABHD4^ENST00000216327.10" ; Parent "TOX4--ABHD4^ABHD4^ENSG00000100439.10" ; exon_id "ENSE00002282278.2" ; exon_number 1 ; gene_id "TOX4--ABHD4^ABHD4^ENSG00000100439.10" ; gene_name ABHD4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000028686.7" ; havana_transcript "OTTHUMT00000474117.1" ; hgnc_id "HGNC:20154" ; level 2 ; orig_coord_info "chr14,22598307,22598329,+" ; protein_id "ENSP00000216327.7" ; tag NMD_likely_if_extended non_canonical_TEC not_organism_supported basic ; transcript_id "TOX4--ABHD4^ENST00000216327.10" ; transcript_name "ABHD4-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
TOX4--ABHD4 HAVANA gene 1001 5456 . + . FI_gene_label "TOX4^ENSG00000092203.15" ; ID "TOX4--ABHD4^TOX4^ENSG00000092203.15" ; exon_id "ENSE00001716189.1" ; exon_number 1 ; gene_id "TOX4--ABHD4^TOX4^ENSG00000092203.15" ; gene_name TOX4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150278.8" ; havana_transcript "OTTHUMT00000317327.2" ; hgnc_id "HGNC:20161" ; level 1 ; orig_coord_info "chr14,21476655,21476747,+" ; protein_id "ENSP00000402195.1" ; tag not_organism_supported mRNA_end_NF cds_end_NF exp_conf ; transcript_id "TOX4--ABHD4^ENST00000416256.5" ; transcript_name "TOX4-201" ; transcript_support_level 5 ; transcript_type protein_coding
TOX4--ABHD4 HAVANA mRNA 1001 5456 . + . FI_gene_label "TOX4^ENSG00000092203.15" ; ID "TOX4--ABHD4^ENST00000416256.5" ; Parent "TOX4--ABHD4^TOX4^ENSG00000092203.15" ; exon_id "ENSE00001716189.1" ; exon_number 1 ; gene_id "TOX4--ABHD4^TOX4^ENSG00000092203.15" ; gene_name TOX4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150278.8" ; havana_transcript "OTTHUMT00000317327.2" ; hgnc_id "HGNC:20161" ; level 1 ; orig_coord_info "chr14,21476655,21476747,+" ; protein_id "ENSP00000402195.1" ; tag not_organism_supported mRNA_end_NF cds_end_NF exp_conf ; transcript_id "TOX4--ABHD4^ENST00000416256.5" ; transcript_name "TOX4-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
TOX4--OR6J1 HAVANA gene 1001 5456 . + . FI_gene_label "TOX4^ENSG00000092203.15" ; ID "TOX4--OR6J1^TOX4^ENSG00000092203.15" ; exon_id "ENSE00001716189.1" ; exon_number 1 ; gene_id "TOX4--OR6J1^TOX4^ENSG00000092203.15" ; gene_name TOX4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150278.8" ; havana_transcript "OTTHUMT00000317327.2" ; hgnc_id "HGNC:20161" ; level 1 ; orig_coord_info "chr14,21476655,21476747,+" ; protein_id "ENSP00000402195.1" ; tag not_organism_supported mRNA_end_NF cds_end_NF exp_conf ; transcript_id "TOX4--OR6J1^ENST00000416256.5" ; transcript_name "TOX4-201" ; transcript_support_level 5 ; transcript_type protein_coding
TOX4--OR6J1 HAVANA mRNA 1001 5456 . + . FI_gene_label "TOX4^ENSG00000092203.15" ; ID "TOX4--OR6J1^ENST00000416256.5" ; Parent "TOX4--OR6J1^TOX4^ENSG00000092203.15" ; exon_id "ENSE00001716189.1" ; exon_number 1 ; gene_id "TOX4--OR6J1^TOX4^ENSG00000092203.15" ; gene_name TOX4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150278.8" ; havana_transcript "OTTHUMT00000317327.2" ; hgnc_id "HGNC:20161" ; level 1 ; orig_coord_info "chr14,21476655,21476747,+" ; protein_id "ENSP00000402195.1" ; tag not_organism_supported mRNA_end_NF cds_end_NF exp_conf ; transcript_id "TOX4--OR6J1^ENST00000416256.5" ; transcript_name "TOX4-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
TOX4--OR6J1 HAVANA gene 16118 21282 . + . FI_gene_label "OR6J1^ENSG00000255804.2" ; ID "TOX4--OR6J1^OR6J1^ENSG00000255804.2" ; ccdsid "CCDS86371.1" ; exon_id "ENSE00002303935.2" ; exon_number 2 ; gene_id "TOX4--OR6J1^OR6J1^ENSG00000255804.2" ; gene_name OR6J1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000168897.4" ; havana_transcript "OTTHUMT00000401548.4" ; hgnc_id "HGNC:14707" ; level 2 ; orig_coord_info "chr14,22633771,22634811,-" ; protein_id "ENSP00000437629.1" ; tag RNA_Seq_supported_partial basic MANE_Select appris_principal_1 CCDS ; transcript_id "TOX4--OR6J1^ENST00000540461.2" ; transcript_name "OR6J1-201" ; transcript_support_level NA ; transcript_type protein_coding
TOX4--OR6J1 HAVANA mRNA 16118 21282 . + . FI_gene_label "OR6J1^ENSG00000255804.2" ; ID "TOX4--OR6J1^ENST00000540461.2" ; Parent "TOX4--OR6J1^OR6J1^ENSG00000255804.2" ; ccdsid "CCDS86371.1" ; exon_id "ENSE00002303935.2" ; exon_number 2 ; gene_id "TOX4--OR6J1^OR6J1^ENSG00000255804.2" ; gene_name OR6J1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000168897.4" ; havana_transcript "OTTHUMT00000401548.4" ; hgnc_id "HGNC:14707" ; level 2 ; orig_coord_info "chr14,22633771,22634811,-" ; protein_id "ENSP00000437629.1" ; tag RNA_Seq_supported_partial basic MANE_Select appris_principal_1 CCDS ; transcript_id "TOX4--OR6J1^ENST00000540461.2" ; transcript_name "OR6J1-201" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
TSPAN14--GH1 HAVANA gene 33890 35526 . + . FI_gene_label "GH1^ENSG00000259384.7" ; ID "TSPAN14--GH1^GH1^ENSG00000259384.7" ; ccdsid "CCDS11653.1" ; exon_id "ENSE00002549577.2" ; exon_number 1 ; gene_id "TSPAN14--GH1^GH1^ENSG00000259384.7" ; gene_name GH1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000193348.2" ; havana_transcript "OTTHUMT00000417708.2" ; hgnc_id "HGNC:4261" ; level 2 ; orig_coord_info "chr17,63918767,63918776,-" ; protein_id "ENSP00000312673.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "TSPAN14--GH1^ENST00000323322.10" ; transcript_name "GH1-201" ; transcript_support_level 1 ; transcript_type protein_coding
TSPAN14--GH1 HAVANA mRNA 33890 35526 . + . FI_gene_label "GH1^ENSG00000259384.7" ; ID "TSPAN14--GH1^ENST00000323322.10" ; Parent "TSPAN14--GH1^GH1^ENSG00000259384.7" ; ccdsid "CCDS11653.1" ; exon_id "ENSE00002549577.2" ; exon_number 1 ; gene_id "TSPAN14--GH1^GH1^ENSG00000259384.7" ; gene_name GH1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000193348.2" ; havana_transcript "OTTHUMT00000417708.2" ; hgnc_id "HGNC:4261" ; level 2 ; orig_coord_info "chr17,63918767,63918776,-" ; protein_id "ENSP00000312673.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "TSPAN14--GH1^ENST00000323322.10" ; transcript_name "GH1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
TSPAN14--GH1 HAVANA gene 1190 16102 . + . FI_gene_label "TSPAN14^ENSG00000108219.15" ; ID "TSPAN14--GH1^TSPAN14^ENSG00000108219.15" ; exon_id "ENSE00003597471.1" ; exon_number 2 ; gene_id "TSPAN14--GH1^TSPAN14^ENSG00000108219.15" ; gene_name TSPAN14 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018615.5" ; havana_transcript "OTTHUMT00000049080.1" ; hgnc_id "HGNC:23303" ; level 2 ; orig_coord_info "chr10,80489234,80489314,+" ; protein_id "ENSP00000344076.6" ; tag basic ; transcript_id "TSPAN14--GH1^ENST00000341863.10" ; transcript_name "TSPAN14-202" ; transcript_support_level 5 ; transcript_type protein_coding
TSPAN14--GH1 HAVANA mRNA 1190 16102 . + . FI_gene_label "TSPAN14^ENSG00000108219.15" ; ID "TSPAN14--GH1^ENST00000341863.10" ; Parent "TSPAN14--GH1^TSPAN14^ENSG00000108219.15" ; exon_id "ENSE00003597471.1" ; exon_number 2 ; gene_id "TSPAN14--GH1^TSPAN14^ENSG00000108219.15" ; gene_name TSPAN14 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018615.5" ; havana_transcript "OTTHUMT00000049080.1" ; hgnc_id "HGNC:23303" ; level 2 ; orig_coord_info "chr10,80489234,80489314,+" ; protein_id "ENSP00000344076.6" ; tag basic ; transcript_id "TSPAN14--GH1^ENST00000341863.10" ; transcript_name "TSPAN14-202" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
TSPAN14--SH3PXD2A-AS1 HAVANA gene 1190 16102 . + . FI_gene_label "TSPAN14^ENSG00000108219.15" ; ID "TSPAN14--SH3PXD2A-AS1^TSPAN14^ENSG00000108219.15" ; exon_id "ENSE00003597471.1" ; exon_number 2 ; gene_id "TSPAN14--SH3PXD2A-AS1^TSPAN14^ENSG00000108219.15" ; gene_name TSPAN14 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018615.5" ; havana_transcript "OTTHUMT00000049080.1" ; hgnc_id "HGNC:23303" ; level 2 ; orig_coord_info "chr10,80489234,80489314,+" ; protein_id "ENSP00000344076.6" ; tag basic ; transcript_id "TSPAN14--SH3PXD2A-AS1^ENST00000341863.10" ; transcript_name "TSPAN14-202" ; transcript_support_level 5 ; transcript_type protein_coding
TSPAN14--SH3PXD2A-AS1 HAVANA mRNA 1190 16102 . + . FI_gene_label "TSPAN14^ENSG00000108219.15" ; ID "TSPAN14--SH3PXD2A-AS1^ENST00000341863.10" ; Parent "TSPAN14--SH3PXD2A-AS1^TSPAN14^ENSG00000108219.15" ; exon_id "ENSE00003597471.1" ; exon_number 2 ; gene_id "TSPAN14--SH3PXD2A-AS1^TSPAN14^ENSG00000108219.15" ; gene_name TSPAN14 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018615.5" ; havana_transcript "OTTHUMT00000049080.1" ; hgnc_id "HGNC:23303" ; level 2 ; orig_coord_info "chr10,80489234,80489314,+" ; protein_id "ENSP00000344076.6" ; tag basic ; transcript_id "TSPAN14--SH3PXD2A-AS1^ENST00000341863.10" ; transcript_name "TSPAN14-202" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
TVP23C--CDRT4 HAVANA gene 1052 15760 . + . FI_gene_label "TVP23C^ENSG00000175106.17" ; ID "TVP23C--CDRT4^TVP23C^ENSG00000175106.17" ; ccdsid "CCDS11170.1" ; exon_id "ENSE00001105678.2" ; exon_number 1 ; gene_id "TVP23C--CDRT4^TVP23C^ENSG00000175106.17" ; gene_name TVP23C ; gene_type protein_coding ; havana_gene "OTTHUMG00000171461.10" ; havana_transcript "OTTHUMT00000130705.3" ; hgnc_id "HGNC:30453" ; level 2 ; orig_coord_info "chr17,15563437,15563448,-" ; protein_id "ENSP00000225576.3" ; tag basic CCDS ; transcript_id "TVP23C--CDRT4^ENST00000225576.7" ; transcript_name "TVP23C-201" ; transcript_support_level 1 ; transcript_type protein_coding
TVP23C--CDRT4 HAVANA mRNA 1052 15760 . + . FI_gene_label "TVP23C^ENSG00000175106.17" ; ID "TVP23C--CDRT4^ENST00000225576.7" ; Parent "TVP23C--CDRT4^TVP23C^ENSG00000175106.17" ; ccdsid "CCDS11170.1" ; exon_id "ENSE00001105678.2" ; exon_number 1 ; gene_id "TVP23C--CDRT4^TVP23C^ENSG00000175106.17" ; gene_name TVP23C ; gene_type protein_coding ; havana_gene "OTTHUMG00000171461.10" ; havana_transcript "OTTHUMT00000130705.3" ; hgnc_id "HGNC:30453" ; level 2 ; orig_coord_info "chr17,15563437,15563448,-" ; protein_id "ENSP00000225576.3" ; tag basic CCDS ; transcript_id "TVP23C--CDRT4^ENST00000225576.7" ; transcript_name "TVP23C-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
TVP23C--CDRT4 HAVANA gene 19889 25887 . + . FI_gene_label "CDRT4^ENSG00000239704.11" ; ID "TVP23C--CDRT4^CDRT4^ENSG00000239704.11" ; ccdsid "CCDS73995.1" ; exon_id "ENSE00003735347.1" ; exon_number 3 ; gene_id "TVP23C--CDRT4^CDRT4^ENSG00000239704.11" ; gene_name CDRT4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000059070.14" ; havana_transcript "OTTHUMT00000130383.9" ; hgnc_id "HGNC:14383" ; level 2 ; orig_coord_info "chr17,15440208,15440238,-" ; protein_id "ENSP00000482523.1" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "TVP23C--CDRT4^ENST00000619038.5" ; transcript_name "CDRT4-204" ; transcript_support_level 1 ; transcript_type protein_coding
TVP23C--CDRT4 HAVANA mRNA 19889 25887 . + . FI_gene_label "CDRT4^ENSG00000239704.11" ; ID "TVP23C--CDRT4^ENST00000619038.5" ; Parent "TVP23C--CDRT4^CDRT4^ENSG00000239704.11" ; ccdsid "CCDS73995.1" ; exon_id "ENSE00003735347.1" ; exon_number 3 ; gene_id "TVP23C--CDRT4^CDRT4^ENSG00000239704.11" ; gene_name CDRT4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000059070.14" ; havana_transcript "OTTHUMT00000130383.9" ; hgnc_id "HGNC:14383" ; level 2 ; orig_coord_info "chr17,15440208,15440238,-" ; protein_id "ENSP00000482523.1" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "TVP23C--CDRT4^ENST00000619038.5" ; transcript_name "CDRT4-204" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
UBE2V1--TRPC4AP HAVANA gene 17159 36892 . + . FI_gene_label "TRPC4AP^ENSG00000100991.12" ; ID "UBE2V1--TRPC4AP^TRPC4AP^ENSG00000100991.12" ; ccdsid "CCDS13246.1" ; exon_id "ENSE00002254384.1" ; exon_number 1 ; gene_id "UBE2V1--TRPC4AP^TRPC4AP^ENSG00000100991.12" ; gene_name TRPC4AP ; gene_type protein_coding ; havana_gene "OTTHUMG00000032319.3" ; havana_transcript "OTTHUMT00000078832.2" ; hgnc_id "HGNC:16181" ; level 2 ; orig_coord_info "chr20,35092614,35092781,-" ; protein_id "ENSP00000252015.2" ; tag basic MANE_Select appris_principal_4 CCDS ; transcript_id "UBE2V1--TRPC4AP^ENST00000252015.3" ; transcript_name "TRPC4AP-201" ; transcript_support_level 1 ; transcript_type protein_coding
UBE2V1--TRPC4AP HAVANA mRNA 17159 36892 . + . FI_gene_label "TRPC4AP^ENSG00000100991.12" ; ID "UBE2V1--TRPC4AP^ENST00000252015.3" ; Parent "UBE2V1--TRPC4AP^TRPC4AP^ENSG00000100991.12" ; ccdsid "CCDS13246.1" ; exon_id "ENSE00002254384.1" ; exon_number 1 ; gene_id "UBE2V1--TRPC4AP^TRPC4AP^ENSG00000100991.12" ; gene_name TRPC4AP ; gene_type protein_coding ; havana_gene "OTTHUMG00000032319.3" ; havana_transcript "OTTHUMT00000078832.2" ; hgnc_id "HGNC:16181" ; level 2 ; orig_coord_info "chr20,35092614,35092781,-" ; protein_id "ENSP00000252015.2" ; tag basic MANE_Select appris_principal_4 CCDS ; transcript_id "UBE2V1--TRPC4AP^ENST00000252015.3" ; transcript_name "TRPC4AP-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
UBE2V1--TRPC4AP HAVANA gene 1006 14158 . + . FI_gene_label "UBE2V1^ENSG00000244687.12" ; ID "UBE2V1--TRPC4AP^UBE2V1^ENSG00000244687.12" ; ccdsid "CCDS13426.1" ; exon_id "ENSE00003467885.1" ; exon_number 1 ; gene_id "UBE2V1--TRPC4AP^UBE2V1^ENSG00000244687.12" ; gene_name UBE2V1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000152626.6" ; havana_transcript "OTTHUMT00000080531.1" ; hgnc_id "HGNC:12494" ; level 2 ; orig_coord_info "chr20,50115485,50115575,-" ; protein_id "ENSP00000340305.3" ; tag alternative_5_UTR basic CCDS ; transcript_id "UBE2V1--TRPC4AP^ENST00000340309.7" ; transcript_name "UBE2V1-201" ; transcript_support_level 1 ; transcript_type protein_coding
UBE2V1--TRPC4AP HAVANA mRNA 1006 14158 . + . FI_gene_label "UBE2V1^ENSG00000244687.12" ; ID "UBE2V1--TRPC4AP^ENST00000340309.7" ; Parent "UBE2V1--TRPC4AP^UBE2V1^ENSG00000244687.12" ; ccdsid "CCDS13426.1" ; exon_id "ENSE00003467885.1" ; exon_number 1 ; gene_id "UBE2V1--TRPC4AP^UBE2V1^ENSG00000244687.12" ; gene_name UBE2V1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000152626.6" ; havana_transcript "OTTHUMT00000080531.1" ; hgnc_id "HGNC:12494" ; level 2 ; orig_coord_info "chr20,50115485,50115575,-" ; protein_id "ENSP00000340305.3" ; tag alternative_5_UTR basic CCDS ; transcript_id "UBE2V1--TRPC4AP^ENST00000340309.7" ; transcript_name "UBE2V1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
UQCRC2--C2orf16 HAVANA gene 1074 17422 . + . FI_gene_label "UQCRC2^ENSG00000140740.11" ; ID "UQCRC2--C2orf16^UQCRC2^ENSG00000140740.11" ; ccdsid "CCDS10601.1" ; exon_id "ENSE00003894159.1" ; exon_number 1 ; gene_id "UQCRC2--C2orf16^UQCRC2^ENSG00000140740.11" ; gene_name UQCRC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000131585.4" ; havana_transcript "OTTHUMT00000254466.2" ; hgnc_id "HGNC:12586" ; level 2 ; orig_coord_info "chr16,21953424,21953456,+" ; protein_id "ENSP00000268379.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "UQCRC2--C2orf16^ENST00000268379.9" ; transcript_name "UQCRC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
UQCRC2--C2orf16 HAVANA mRNA 1074 17422 . + . FI_gene_label "UQCRC2^ENSG00000140740.11" ; ID "UQCRC2--C2orf16^ENST00000268379.9" ; Parent "UQCRC2--C2orf16^UQCRC2^ENSG00000140740.11" ; ccdsid "CCDS10601.1" ; exon_id "ENSE00003894159.1" ; exon_number 1 ; gene_id "UQCRC2--C2orf16^UQCRC2^ENSG00000140740.11" ; gene_name UQCRC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000131585.4" ; havana_transcript "OTTHUMT00000254466.2" ; hgnc_id "HGNC:12586" ; level 2 ; orig_coord_info "chr16,21953424,21953456,+" ; protein_id "ENSP00000268379.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "UQCRC2--C2orf16^ENST00000268379.9" ; transcript_name "UQCRC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
UQCRC2--C2orf16 ENSEMBL gene 32793 38992 . + . FI_gene_label "C2orf16^ENSG00000221843.4" ; ID "UQCRC2--C2orf16^C2orf16^ENSG00000221843.4" ; ccdsid "CCDS42666.1" ; exon_id "ENSE00001575530.4" ; exon_number 1 ; gene_id "UQCRC2--C2orf16^C2orf16^ENSG00000221843.4" ; gene_name C2orf16 ; gene_type protein_coding ; havana_gene "OTTHUMG00000159099.2" ; hgnc_id "HGNC:25275" ; level 3 ; orig_coord_info "chr2,27576573,27582524,+" ; protein_id "ENSP00000386190.2" ; tag basic appris_alternative_2 CCDS ; transcript_id "UQCRC2--C2orf16^ENST00000408964.4" ; transcript_name "C2orf16-201" ; transcript_support_level NA ; transcript_type protein_coding
UQCRC2--C2orf16 ENSEMBL mRNA 32793 38992 . + . FI_gene_label "C2orf16^ENSG00000221843.4" ; ID "UQCRC2--C2orf16^ENST00000408964.4" ; Parent "UQCRC2--C2orf16^C2orf16^ENSG00000221843.4" ; ccdsid "CCDS42666.1" ; exon_id "ENSE00001575530.4" ; exon_number 1 ; gene_id "UQCRC2--C2orf16^C2orf16^ENSG00000221843.4" ; gene_name C2orf16 ; gene_type protein_coding ; havana_gene "OTTHUMG00000159099.2" ; hgnc_id "HGNC:25275" ; level 3 ; orig_coord_info "chr2,27576573,27582524,+" ; protein_id "ENSP00000386190.2" ; tag basic appris_alternative_2 CCDS ; transcript_id "UQCRC2--C2orf16^ENST00000408964.4" ; transcript_name "C2orf16-201" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
USP34--EHBP1 HAVANA gene 78157 110319 . + . FI_gene_label "EHBP1^ENSG00000115504.15" ; ID "USP34--EHBP1^EHBP1^ENSG00000115504.15" ; ccdsid "CCDS1872.1" ; exon_id "ENSE00003560955.1" ; exon_number 2 ; gene_id "USP34--EHBP1^EHBP1^ENSG00000115504.15" ; gene_name EHBP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129453.7" ; havana_transcript "OTTHUMT00000251616.1" ; hgnc_id "HGNC:29144" ; level 2 ; orig_coord_info "chr2,62707192,62707295,+" ; protein_id "ENSP00000263991.5" ; tag basic appris_principal_4 CCDS ; transcript_id "USP34--EHBP1^ENST00000263991.9" ; transcript_name "EHBP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
USP34--EHBP1 HAVANA mRNA 78157 110319 . + . FI_gene_label "EHBP1^ENSG00000115504.15" ; ID "USP34--EHBP1^ENST00000263991.9" ; Parent "USP34--EHBP1^EHBP1^ENSG00000115504.15" ; ccdsid "CCDS1872.1" ; exon_id "ENSE00003560955.1" ; exon_number 2 ; gene_id "USP34--EHBP1^EHBP1^ENSG00000115504.15" ; gene_name EHBP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129453.7" ; havana_transcript "OTTHUMT00000251616.1" ; hgnc_id "HGNC:29144" ; level 2 ; orig_coord_info "chr2,62707192,62707295,+" ; protein_id "ENSP00000263991.5" ; tag basic appris_principal_4 CCDS ; transcript_id "USP34--EHBP1^ENST00000263991.9" ; transcript_name "EHBP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
USP34--EHBP1 HAVANA gene 1001 73699 . + . FI_gene_label "USP34^ENSG00000115464.15" ; ID "USP34--EHBP1^USP34^ENSG00000115464.15" ; ccdsid "CCDS42686.1" ; exon_id "ENSE00001533950.3" ; exon_number 1 ; gene_id "USP34--EHBP1^USP34^ENSG00000115464.15" ; gene_name USP34 ; gene_type protein_coding ; havana_gene "OTTHUMG00000152265.10" ; havana_transcript "OTTHUMT00000325650.5" ; hgnc_id "HGNC:20066" ; level 2 ; orig_coord_info "chr2,61470650,61470692,-" ; protein_id "ENSP00000381577.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "USP34--EHBP1^ENST00000398571.7" ; transcript_name "USP34-201" ; transcript_support_level 5 ; transcript_type protein_coding
USP34--EHBP1 HAVANA mRNA 1001 73699 . + . FI_gene_label "USP34^ENSG00000115464.15" ; ID "USP34--EHBP1^ENST00000398571.7" ; Parent "USP34--EHBP1^USP34^ENSG00000115464.15" ; ccdsid "CCDS42686.1" ; exon_id "ENSE00001533950.3" ; exon_number 1 ; gene_id "USP34--EHBP1^USP34^ENSG00000115464.15" ; gene_name USP34 ; gene_type protein_coding ; havana_gene "OTTHUMG00000152265.10" ; havana_transcript "OTTHUMT00000325650.5" ; hgnc_id "HGNC:20066" ; level 2 ; orig_coord_info "chr2,61470650,61470692,-" ; protein_id "ENSP00000381577.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "USP34--EHBP1^ENST00000398571.7" ; transcript_name "USP34-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
VEZF1--STRADA HAVANA gene 15537 36329 . + . FI_gene_label "STRADA^ENSG00000266173.7" ; ID "VEZF1--STRADA^STRADA^ENSG00000266173.7" ; exon_id "ENSE00003556671.1" ; exon_number 4 ; gene_id "VEZF1--STRADA^STRADA^ENSG00000266173.7" ; gene_name STRADA ; gene_type protein_coding ; havana_gene "OTTHUMG00000178908.13" ; havana_transcript "OTTHUMT00000443889.2" ; hgnc_id "HGNC:30172" ; level 2 ; orig_coord_info "chr17,63714006,63714057,-" ; protein_id "ENSP00000245865.5" ; tag basic ; transcript_id "VEZF1--STRADA^ENST00000245865.10" ; transcript_name "STRADA-201" ; transcript_support_level 1 ; transcript_type protein_coding
VEZF1--STRADA HAVANA mRNA 15537 36329 . + . FI_gene_label "STRADA^ENSG00000266173.7" ; ID "VEZF1--STRADA^ENST00000245865.10" ; Parent "VEZF1--STRADA^STRADA^ENSG00000266173.7" ; exon_id "ENSE00003556671.1" ; exon_number 4 ; gene_id "VEZF1--STRADA^STRADA^ENSG00000266173.7" ; gene_name STRADA ; gene_type protein_coding ; havana_gene "OTTHUMG00000178908.13" ; havana_transcript "OTTHUMT00000443889.2" ; hgnc_id "HGNC:30172" ; level 2 ; orig_coord_info "chr17,63714006,63714057,-" ; protein_id "ENSP00000245865.5" ; tag basic ; transcript_id "VEZF1--STRADA^ENST00000245865.10" ; transcript_name "STRADA-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
VEZF1--STRADA HAVANA gene 4602 12311 . + . FI_gene_label "VEZF1^ENSG00000136451.9" ; ID "VEZF1--STRADA^VEZF1^ENSG00000136451.9" ; exon_id "ENSE00002709698.1" ; exon_number 1 ; gene_id "VEZF1--STRADA^VEZF1^ENSG00000136451.9" ; gene_name VEZF1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178777.6" ; havana_transcript "OTTHUMT00000445408.2" ; hgnc_id "HGNC:12949" ; level 2 ; orig_coord_info "chr17,57982699,57982864,-" ; protein_id "ENSP00000258963.3" ; tag mRNA_start_NF cds_start_NF ; transcript_id "VEZF1--STRADA^ENST00000258963.7" ; transcript_name "VEZF1-201" ; transcript_support_level 1 ; transcript_type protein_coding
VEZF1--STRADA HAVANA mRNA 4602 12311 . + . FI_gene_label "VEZF1^ENSG00000136451.9" ; ID "VEZF1--STRADA^ENST00000258963.7" ; Parent "VEZF1--STRADA^VEZF1^ENSG00000136451.9" ; exon_id "ENSE00002709698.1" ; exon_number 1 ; gene_id "VEZF1--STRADA^VEZF1^ENSG00000136451.9" ; gene_name VEZF1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178777.6" ; havana_transcript "OTTHUMT00000445408.2" ; hgnc_id "HGNC:12949" ; level 2 ; orig_coord_info "chr17,57982699,57982864,-" ; protein_id "ENSP00000258963.3" ; tag mRNA_start_NF cds_start_NF ; transcript_id "VEZF1--STRADA^ENST00000258963.7" ; transcript_name "VEZF1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
VMP1--AC005884.1 HAVANA gene 1463 20165 . + . FI_gene_label "VMP1^ENSG00000062716.13" ; ID "VMP1--AC005884.1^VMP1^ENSG00000062716.13" ; ccdsid "CCDS11619.1" ; exon_id "ENSE00003550286.1" ; exon_number 2 ; gene_id "VMP1--AC005884.1^VMP1^ENSG00000062716.13" ; gene_name VMP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179882.4" ; havana_transcript "OTTHUMT00000448793.2" ; hgnc_id "HGNC:29559" ; level 2 ; orig_coord_info "chr17,59731447,59731522,+" ; protein_id "ENSP00000262291.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "VMP1--AC005884.1^ENST00000262291.9" ; transcript_name "VMP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
VMP1--AC005884.1 HAVANA mRNA 1463 20165 . + . FI_gene_label "VMP1^ENSG00000062716.13" ; ID "VMP1--AC005884.1^ENST00000262291.9" ; Parent "VMP1--AC005884.1^VMP1^ENSG00000062716.13" ; ccdsid "CCDS11619.1" ; exon_id "ENSE00003550286.1" ; exon_number 2 ; gene_id "VMP1--AC005884.1^VMP1^ENSG00000062716.13" ; gene_name VMP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179882.4" ; havana_transcript "OTTHUMT00000448793.2" ; hgnc_id "HGNC:29559" ; level 2 ; orig_coord_info "chr17,59731447,59731522,+" ; protein_id "ENSP00000262291.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "VMP1--AC005884.1^ENST00000262291.9" ; transcript_name "VMP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
XYLT2--ERN1 HAVANA gene 1001 9706 . + . FI_gene_label "XYLT2^ENSG00000015532.10" ; ID "XYLT2--ERN1^XYLT2^ENSG00000015532.10" ; ccdsid "CCDS11563.1" ; exon_id "ENSE00001292962.4" ; exon_number 1 ; gene_id "XYLT2--ERN1^XYLT2^ENSG00000015532.10" ; gene_name XYLT2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162057.5" ; havana_transcript "OTTHUMT00000367046.2" ; hgnc_id "HGNC:15517" ; level 2 ; orig_coord_info "chr17,50346141,50346275,+" ; protein_id "ENSP00000017003.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "XYLT2--ERN1^ENST00000017003.7" ; transcript_name "XYLT2-201" ; transcript_support_level 1 ; transcript_type protein_coding
XYLT2--ERN1 HAVANA mRNA 1001 9706 . + . FI_gene_label "XYLT2^ENSG00000015532.10" ; ID "XYLT2--ERN1^ENST00000017003.7" ; Parent "XYLT2--ERN1^XYLT2^ENSG00000015532.10" ; ccdsid "CCDS11563.1" ; exon_id "ENSE00001292962.4" ; exon_number 1 ; gene_id "XYLT2--ERN1^XYLT2^ENSG00000015532.10" ; gene_name XYLT2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162057.5" ; havana_transcript "OTTHUMT00000367046.2" ; hgnc_id "HGNC:15517" ; level 2 ; orig_coord_info "chr17,50346141,50346275,+" ; protein_id "ENSP00000017003.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "XYLT2--ERN1^ENST00000017003.7" ; transcript_name "XYLT2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
XYLT2--ERN1 HAVANA gene 14542 50829 . + . FI_gene_label "ERN1^ENSG00000178607.17" ; ID "XYLT2--ERN1^ERN1^ENSG00000178607.17" ; ccdsid "CCDS45762.1" ; exon_id "ENSE00002695232.2" ; exon_number 1 ; gene_id "XYLT2--ERN1^ERN1^ENSG00000178607.17" ; gene_name ERN1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178879.4" ; havana_transcript "OTTHUMT00000443734.3" ; hgnc_id "HGNC:3449" ; level 2 ; orig_coord_info "chr17,64129976,64130029,-" ; protein_id "ENSP00000401445.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "XYLT2--ERN1^ENST00000433197.4" ; transcript_name "ERN1-201" ; transcript_support_level 1 ; transcript_type protein_coding
XYLT2--ERN1 HAVANA mRNA 14542 50829 . + . FI_gene_label "ERN1^ENSG00000178607.17" ; ID "XYLT2--ERN1^ENST00000433197.4" ; Parent "XYLT2--ERN1^ERN1^ENSG00000178607.17" ; ccdsid "CCDS45762.1" ; exon_id "ENSE00002695232.2" ; exon_number 1 ; gene_id "XYLT2--ERN1^ERN1^ENSG00000178607.17" ; gene_name ERN1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178879.4" ; havana_transcript "OTTHUMT00000443734.3" ; hgnc_id "HGNC:3449" ; level 2 ; orig_coord_info "chr17,64129976,64130029,-" ; protein_id "ENSP00000401445.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "XYLT2--ERN1^ENST00000433197.4" ; transcript_name "ERN1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
XYLT2--ICAM2 HAVANA gene 1001 9706 . + . FI_gene_label "XYLT2^ENSG00000015532.10" ; ID "XYLT2--ICAM2^XYLT2^ENSG00000015532.10" ; ccdsid "CCDS11563.1" ; exon_id "ENSE00001292962.4" ; exon_number 1 ; gene_id "XYLT2--ICAM2^XYLT2^ENSG00000015532.10" ; gene_name XYLT2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162057.5" ; havana_transcript "OTTHUMT00000367046.2" ; hgnc_id "HGNC:15517" ; level 2 ; orig_coord_info "chr17,50346141,50346275,+" ; protein_id "ENSP00000017003.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "XYLT2--ICAM2^ENST00000017003.7" ; transcript_name "XYLT2-201" ; transcript_support_level 1 ; transcript_type protein_coding
XYLT2--ICAM2 HAVANA mRNA 1001 9706 . + . FI_gene_label "XYLT2^ENSG00000015532.10" ; ID "XYLT2--ICAM2^ENST00000017003.7" ; Parent "XYLT2--ICAM2^XYLT2^ENSG00000015532.10" ; ccdsid "CCDS11563.1" ; exon_id "ENSE00001292962.4" ; exon_number 1 ; gene_id "XYLT2--ICAM2^XYLT2^ENSG00000015532.10" ; gene_name XYLT2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162057.5" ; havana_transcript "OTTHUMT00000367046.2" ; hgnc_id "HGNC:15517" ; level 2 ; orig_coord_info "chr17,50346141,50346275,+" ; protein_id "ENSP00000017003.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "XYLT2--ICAM2^ENST00000017003.7" ; transcript_name "XYLT2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
XYLT2--ICAM2 ENSEMBL gene 13867 20322 . + . FI_gene_label "ICAM2^ENSG00000108622.11" ; ID "XYLT2--ICAM2^ICAM2^ENSG00000108622.11" ; ccdsid "CCDS11657.1" ; exon_id "ENSE00003562599.1" ; exon_number 3 ; gene_id "XYLT2--ICAM2^ICAM2^ENSG00000108622.11" ; gene_name ICAM2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178865.5" ; hgnc_id "HGNC:5345" ; level 3 ; orig_coord_info "chr17,64006631,64006691,-" ; protein_id "ENSP00000415283.1" ; tag basic appris_principal_1 CCDS ; transcript_id "XYLT2--ICAM2^ENST00000412356.5" ; transcript_name "ICAM2-201" ; transcript_support_level 5 ; transcript_type protein_coding
XYLT2--ICAM2 ENSEMBL mRNA 13867 20322 . + . FI_gene_label "ICAM2^ENSG00000108622.11" ; ID "XYLT2--ICAM2^ENST00000412356.5" ; Parent "XYLT2--ICAM2^ICAM2^ENSG00000108622.11" ; ccdsid "CCDS11657.1" ; exon_id "ENSE00003562599.1" ; exon_number 3 ; gene_id "XYLT2--ICAM2^ICAM2^ENSG00000108622.11" ; gene_name ICAM2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000178865.5" ; hgnc_id "HGNC:5345" ; level 3 ; orig_coord_info "chr17,64006631,64006691,-" ; protein_id "ENSP00000415283.1" ; tag basic appris_principal_1 CCDS ; transcript_id "XYLT2--ICAM2^ENST00000412356.5" ; transcript_name "ICAM2-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
YAP1--CEP126 HAVANA gene 19697 38896 . + . FI_gene_label "CEP126^ENSG00000110318.15" ; ID "YAP1--CEP126^CEP126^ENSG00000110318.15" ; ccdsid "CCDS31658.1" ; exon_id "ENSE00001468391.3" ; exon_number 1 ; gene_id "YAP1--CEP126^CEP126^ENSG00000110318.15" ; gene_name CEP126 ; gene_type protein_coding ; havana_gene "OTTHUMG00000167319.4" ; havana_transcript "OTTHUMT00000394140.4" ; hgnc_id "HGNC:29264" ; level 2 ; orig_coord_info "chr11,101915285,101915412,+" ; protein_id "ENSP00000263468.8" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "YAP1--CEP126^ENST00000263468.13" ; transcript_name "CEP126-201" ; transcript_support_level 1 ; transcript_type protein_coding
YAP1--CEP126 HAVANA mRNA 19697 38896 . + . FI_gene_label "CEP126^ENSG00000110318.15" ; ID "YAP1--CEP126^ENST00000263468.13" ; Parent "YAP1--CEP126^CEP126^ENSG00000110318.15" ; ccdsid "CCDS31658.1" ; exon_id "ENSE00001468391.3" ; exon_number 1 ; gene_id "YAP1--CEP126^CEP126^ENSG00000110318.15" ; gene_name CEP126 ; gene_type protein_coding ; havana_gene "OTTHUMG00000167319.4" ; havana_transcript "OTTHUMT00000394140.4" ; hgnc_id "HGNC:29264" ; level 2 ; orig_coord_info "chr11,101915285,101915412,+" ; protein_id "ENSP00000263468.8" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "YAP1--CEP126^ENST00000263468.13" ; transcript_name "CEP126-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
YAP1--CEP126 HAVANA gene 1001 16696 . + . FI_gene_label "YAP1^ENSG00000137693.14" ; ID "YAP1--CEP126^YAP1^ENSG00000137693.14" ; ccdsid "CCDS44716.1" ; exon_id "ENSE00003850849.1" ; exon_number 1 ; gene_id "YAP1--CEP126^YAP1^ENSG00000137693.14" ; gene_name YAP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000167322.4" ; havana_transcript "OTTHUMT00000394151.2" ; hgnc_id "HGNC:16262" ; level 2 ; orig_coord_info "chr11,102110849,102111169,+" ; protein_id "ENSP00000282441.5" ; tag basic MANE_Select appris_principal_4 CCDS ; transcript_id "YAP1--CEP126^ENST00000282441.10" ; transcript_name "YAP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
YAP1--CEP126 HAVANA mRNA 1001 16696 . + . FI_gene_label "YAP1^ENSG00000137693.14" ; ID "YAP1--CEP126^ENST00000282441.10" ; Parent "YAP1--CEP126^YAP1^ENSG00000137693.14" ; ccdsid "CCDS44716.1" ; exon_id "ENSE00003850849.1" ; exon_number 1 ; gene_id "YAP1--CEP126^YAP1^ENSG00000137693.14" ; gene_name YAP1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000167322.4" ; havana_transcript "OTTHUMT00000394151.2" ; hgnc_id "HGNC:16262" ; level 2 ; orig_coord_info "chr11,102110849,102111169,+" ; protein_id "ENSP00000282441.5" ; tag basic MANE_Select appris_principal_4 CCDS ; transcript_id "YAP1--CEP126^ENST00000282441.10" ; transcript_name "YAP1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
AC005670.3--SP2 HAVANA gene 6059 28078 . + . FI_gene_label "AC005670.3^ENSG00000262879.6" ; ID "AC005670.3--SP2^AC005670.3^ENSG00000262879.6" ; exon_id "ENSE00003857049.1" ; exon_number 1 ; gene_id "AC005670.3--SP2^AC005670.3^ENSG00000262879.6" ; gene_name "AC005670.3" ; gene_type lncRNA ; havana_gene "OTTHUMG00000178188.23" ; havana_transcript "OTTHUMT00000440922.2" ; level 2 ; orig_coord_info "chr17,47067414,47067513,-" ; tag TAGENE ; transcript_id "AC005670.3--SP2^ENST00000570314.2" ; transcript_name "AC005670.3-210" ; transcript_support_level 3 ; transcript_type lncRNA
AC005670.3--SP2 HAVANA RNA 6059 28078 . + . FI_gene_label "AC005670.3^ENSG00000262879.6" ; ID "AC005670.3--SP2^ENST00000570314.2" ; Parent "AC005670.3--SP2^AC005670.3^ENSG00000262879.6" ; exon_id "ENSE00003857049.1" ; exon_number 1 ; gene_id "AC005670.3--SP2^AC005670.3^ENSG00000262879.6" ; gene_name "AC005670.3" ; gene_type lncRNA ; havana_gene "OTTHUMG00000178188.23" ; havana_transcript "OTTHUMT00000440922.2" ; level 2 ; orig_coord_info "chr17,47067414,47067513,-" ; tag TAGENE ; transcript_id "AC005670.3--SP2^ENST00000570314.2" ; transcript_name "AC005670.3-210" ; transcript_support_level 3 ; transcript_type lncRNA
L1 and L2 created:
AC005972.3--FBXL20 HAVANA gene 1001 2733 . + . FI_gene_label "AC005972.3^ENSG00000283538.3" ; ID "AC005972.3--FBXL20^AC005972.3^ENSG00000283538.3" ; exon_id "ENSE00003837708.1" ; exon_number 1 ; gene_id "AC005972.3--FBXL20^AC005972.3^ENSG00000283538.3" ; gene_name "AC005972.3" ; gene_type lncRNA ; havana_gene "OTTHUMG00000179100.4" ; havana_transcript "OTTHUMT00000444764.1" ; level 2 ; orig_coord_info "chr17,62968500,62968549,-" ; tag basic ; transcript_id "AC005972.3--FBXL20^ENST00000581596.1" ; transcript_name "AC005972.3-203" ; transcript_support_level 1 ; transcript_type lncRNA
AC005972.3--FBXL20 HAVANA RNA 1001 2733 . + . FI_gene_label "AC005972.3^ENSG00000283538.3" ; ID "AC005972.3--FBXL20^ENST00000581596.1" ; Parent "AC005972.3--FBXL20^AC005972.3^ENSG00000283538.3" ; exon_id "ENSE00003837708.1" ; exon_number 1 ; gene_id "AC005972.3--FBXL20^AC005972.3^ENSG00000283538.3" ; gene_name "AC005972.3" ; gene_type lncRNA ; havana_gene "OTTHUMG00000179100.4" ; havana_transcript "OTTHUMT00000444764.1" ; level 2 ; orig_coord_info "chr17,62968500,62968549,-" ; tag basic ; transcript_id "AC005972.3--FBXL20^ENST00000581596.1" ; transcript_name "AC005972.3-203" ; transcript_support_level 1 ; transcript_type lncRNA
L1 and L2 created:
AC005972.3--SKAP1 HAVANA gene 1001 2733 . + . FI_gene_label "AC005972.3^ENSG00000283538.3" ; ID "AC005972.3--SKAP1^AC005972.3^ENSG00000283538.3" ; exon_id "ENSE00003837708.1" ; exon_number 1 ; gene_id "AC005972.3--SKAP1^AC005972.3^ENSG00000283538.3" ; gene_name "AC005972.3" ; gene_type lncRNA ; havana_gene "OTTHUMG00000179100.4" ; havana_transcript "OTTHUMT00000444764.1" ; level 2 ; orig_coord_info "chr17,62968500,62968549,-" ; tag basic ; transcript_id "AC005972.3--SKAP1^ENST00000581596.1" ; transcript_name "AC005972.3-203" ; transcript_support_level 1 ; transcript_type lncRNA
AC005972.3--SKAP1 HAVANA RNA 1001 2733 . + . FI_gene_label "AC005972.3^ENSG00000283538.3" ; ID "AC005972.3--SKAP1^ENST00000581596.1" ; Parent "AC005972.3--SKAP1^AC005972.3^ENSG00000283538.3" ; exon_id "ENSE00003837708.1" ; exon_number 1 ; gene_id "AC005972.3--SKAP1^AC005972.3^ENSG00000283538.3" ; gene_name "AC005972.3" ; gene_type lncRNA ; havana_gene "OTTHUMG00000179100.4" ; havana_transcript "OTTHUMT00000444764.1" ; level 2 ; orig_coord_info "chr17,62968500,62968549,-" ; tag basic ; transcript_id "AC005972.3--SKAP1^ENST00000581596.1" ; transcript_name "AC005972.3-203" ; transcript_support_level 1 ; transcript_type lncRNA
L1 and L2 created:
AC079610.2--IKZF2 HAVANA gene 1001 2147 . + . FI_gene_label "AC079610.2^ENSG00000272519.1" ; ID "AC079610.2--IKZF2^AC079610.2^ENSG00000272519.1" ; exon_id "ENSE00003699505.1" ; exon_number 1 ; gene_id "AC079610.2--IKZF2^AC079610.2^ENSG00000272519.1" ; gene_name "AC079610.2" ; gene_type lncRNA ; havana_gene "OTTHUMG00000185531.1" ; havana_transcript "OTTHUMT00000470662.1" ; level 2 ; orig_coord_info "chr2,213276072,213276152,-" ; tag basic ; transcript_id "AC079610.2--IKZF2^ENST00000606960.1" ; transcript_name "AC079610.2-201" ; transcript_support_level 3 ; transcript_type lncRNA
AC079610.2--IKZF2 HAVANA RNA 1001 2147 . + . FI_gene_label "AC079610.2^ENSG00000272519.1" ; ID "AC079610.2--IKZF2^ENST00000606960.1" ; Parent "AC079610.2--IKZF2^AC079610.2^ENSG00000272519.1" ; exon_id "ENSE00003699505.1" ; exon_number 1 ; gene_id "AC079610.2--IKZF2^AC079610.2^ENSG00000272519.1" ; gene_name "AC079610.2" ; gene_type lncRNA ; havana_gene "OTTHUMG00000185531.1" ; havana_transcript "OTTHUMT00000470662.1" ; level 2 ; orig_coord_info "chr2,213276072,213276152,-" ; tag basic ; transcript_id "AC079610.2--IKZF2^ENST00000606960.1" ; transcript_name "AC079610.2-201" ; transcript_support_level 3 ; transcript_type lncRNA
L1 and L2 created:
AC092807.3--DDAH1 HAVANA gene 1101 8302 . + . FI_gene_label "AC092807.3^ENSG00000282057.1" ; ID "AC092807.3--DDAH1^AC092807.3^ENSG00000282057.1" ; exon_id "ENSE00001891111.1" ; exon_number 1 ; gene_id "AC092807.3--DDAH1^AC092807.3^ENSG00000282057.1" ; gene_name "AC092807.3" ; gene_type lncRNA ; havana_gene "OTTHUMG00000010578.6" ; havana_transcript "OTTHUMT00000029193.2" ; level 2 ; orig_coord_info "chr1,85577984,85578150,-" ; tag basic ; transcript_id "AC092807.3--DDAH1^ENST00000467530.5" ; transcript_name "AC092807.3-203" ; transcript_support_level 2 ; transcript_type lncRNA
AC092807.3--DDAH1 HAVANA RNA 1101 8302 . + . FI_gene_label "AC092807.3^ENSG00000282057.1" ; ID "AC092807.3--DDAH1^ENST00000467530.5" ; Parent "AC092807.3--DDAH1^AC092807.3^ENSG00000282057.1" ; exon_id "ENSE00001891111.1" ; exon_number 1 ; gene_id "AC092807.3--DDAH1^AC092807.3^ENSG00000282057.1" ; gene_name "AC092807.3" ; gene_type lncRNA ; havana_gene "OTTHUMG00000010578.6" ; havana_transcript "OTTHUMT00000029193.2" ; level 2 ; orig_coord_info "chr1,85577984,85578150,-" ; tag basic ; transcript_id "AC092807.3--DDAH1^ENST00000467530.5" ; transcript_name "AC092807.3-203" ; transcript_support_level 2 ; transcript_type lncRNA
L1 and L2 created:
AC239859.5--AC013734.1 HAVANA gene 4584 4694 . + . FI_gene_label "AC013734.1^ENSG00000277146.1" ; ID "AC239859.5--AC013734.1^AC013734.1^ENSG00000277146.1" ; exon_id "ENSE00003713380.1" ; exon_number 1 ; gene_id "AC239859.5--AC013734.1^AC013734.1^ENSG00000277146.1" ; gene_name "AC013734.1" ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000188106.1" ; havana_transcript "OTTHUMT00000475889.1" ; level 2 ; ont "PGO:0000004" ; orig_coord_info "chrY,26453982,26454092,+" ; tag basic ; transcript_id "AC239859.5--AC013734.1^ENST00000619329.1" ; transcript_name "AC013734.1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
AC239859.5--AC013734.1 HAVANA RNA 4584 4694 . + . FI_gene_label "AC013734.1^ENSG00000277146.1" ; ID "AC239859.5--AC013734.1^ENST00000619329.1" ; Parent "AC239859.5--AC013734.1^AC013734.1^ENSG00000277146.1" ; exon_id "ENSE00003713380.1" ; exon_number 1 ; gene_id "AC239859.5--AC013734.1^AC013734.1^ENSG00000277146.1" ; gene_name "AC013734.1" ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000188106.1" ; havana_transcript "OTTHUMT00000475889.1" ; level 2 ; ont "PGO:0000004" ; orig_coord_info "chrY,26453982,26454092,+" ; tag basic ; transcript_id "AC239859.5--AC013734.1^ENST00000619329.1" ; transcript_name "AC013734.1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
L1 and L2 created:
AC239859.5--AC013734.1 HAVANA gene 1001 1583 . + . FI_gene_label "AC239859.5^ENSG00000277702.1" ; ID "AC239859.5--AC013734.1^AC239859.5^ENSG00000277702.1" ; exon_id "ENSE00003729917.1" ; exon_number 1 ; gene_id "AC239859.5--AC013734.1^AC239859.5^ENSG00000277702.1" ; gene_name "AC239859.5" ; gene_type unprocessed_pseudogene ; havana_gene "OTTHUMG00000188681.1" ; havana_transcript "OTTHUMT00000477888.1" ; level 2 ; ont "PGO:0000005" ; orig_coord_info "chr1,143420073,143420207,-" ; tag basic ; transcript_id "AC239859.5--AC013734.1^ENST00000622095.1" ; transcript_name "AC239859.5-201" ; transcript_support_level NA ; transcript_type unprocessed_pseudogene
AC239859.5--AC013734.1 HAVANA RNA 1001 1583 . + . FI_gene_label "AC239859.5^ENSG00000277702.1" ; ID "AC239859.5--AC013734.1^ENST00000622095.1" ; Parent "AC239859.5--AC013734.1^AC239859.5^ENSG00000277702.1" ; exon_id "ENSE00003729917.1" ; exon_number 1 ; gene_id "AC239859.5--AC013734.1^AC239859.5^ENSG00000277702.1" ; gene_name "AC239859.5" ; gene_type unprocessed_pseudogene ; havana_gene "OTTHUMG00000188681.1" ; havana_transcript "OTTHUMT00000477888.1" ; level 2 ; ont "PGO:0000005" ; orig_coord_info "chr1,143420073,143420207,-" ; tag basic ; transcript_id "AC239859.5--AC013734.1^ENST00000622095.1" ; transcript_name "AC239859.5-201" ; transcript_support_level NA ; transcript_type unprocessed_pseudogene
L1 and L2 created:
AL136367.1--LRMDA ENSEMBL gene 1001 1136 . + . FI_gene_label "AL136367.1^ENSG00000212421.1" ; ID "AL136367.1--LRMDA^AL136367.1^ENSG00000212421.1" ; exon_id "ENSE00001508903.1" ; exon_number 1 ; gene_id "AL136367.1--LRMDA^AL136367.1^ENSG00000212421.1" ; gene_name "AL136367.1" ; gene_type snoRNA ; level 3 ; orig_coord_info "chr9,87260450,87260585,+" ; tag basic ; transcript_id "AL136367.1--LRMDA^ENST00000391119.1" ; transcript_name "AL136367.1-201" ; transcript_support_level NA ; transcript_type snoRNA
AL136367.1--LRMDA ENSEMBL RNA 1001 1136 . + . FI_gene_label "AL136367.1^ENSG00000212421.1" ; ID "AL136367.1--LRMDA^ENST00000391119.1" ; Parent "AL136367.1--LRMDA^AL136367.1^ENSG00000212421.1" ; exon_id "ENSE00001508903.1" ; exon_number 1 ; gene_id "AL136367.1--LRMDA^AL136367.1^ENSG00000212421.1" ; gene_name "AL136367.1" ; gene_type snoRNA ; level 3 ; orig_coord_info "chr9,87260450,87260585,+" ; tag basic ; transcript_id "AL136367.1--LRMDA^ENST00000391119.1" ; transcript_name "AL136367.1-201" ; transcript_support_level NA ; transcript_type snoRNA
L1 and L2 created:
AL353752.1--LRMDA HAVANA gene 1001 1260 . + . FI_gene_label "AL353752.1^ENSG00000228373.2" ; ID "AL353752.1--LRMDA^AL353752.1^ENSG00000228373.2" ; exon_id "ENSE00001683183.2" ; exon_number 1 ; gene_id "AL353752.1--LRMDA^AL353752.1^ENSG00000228373.2" ; gene_name "AL353752.1" ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000020146.2" ; havana_transcript "OTTHUMT00000052933.2" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr9,87423634,87423893,+" ; tag pseudo_consens basic ; transcript_id "AL353752.1--LRMDA^ENST00000454946.2" ; transcript_name "AL353752.1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
AL353752.1--LRMDA HAVANA RNA 1001 1260 . + . FI_gene_label "AL353752.1^ENSG00000228373.2" ; ID "AL353752.1--LRMDA^ENST00000454946.2" ; Parent "AL353752.1--LRMDA^AL353752.1^ENSG00000228373.2" ; exon_id "ENSE00001683183.2" ; exon_number 1 ; gene_id "AL353752.1--LRMDA^AL353752.1^ENSG00000228373.2" ; gene_name "AL353752.1" ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000020146.2" ; havana_transcript "OTTHUMT00000052933.2" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr9,87423634,87423893,+" ; tag pseudo_consens basic ; transcript_id "AL353752.1--LRMDA^ENST00000454946.2" ; transcript_name "AL353752.1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
L1 and L2 created:
ATIC--LINC00607 HAVANA gene 24764 29448 . + . FI_gene_label "LINC00607^ENSG00000235770.6" ; ID "ATIC--LINC00607^LINC00607^ENSG00000235770.6" ; exon_id "ENSE00003872244.1" ; exon_number 1 ; gene_id "ATIC--LINC00607^LINC00607^ENSG00000235770.6" ; gene_name LINC00607 ; gene_type lncRNA ; havana_gene "OTTHUMG00000154834.11" ; havana_transcript "OTTHUMT00000524151.1" ; hgnc_id "HGNC:43944" ; level 2 ; orig_coord_info "chr2,215827352,215827367,-" ; tag TAGENE ; transcript_id "ATIC--LINC00607^ENST00000413563.6" ; transcript_name "LINC00607-201" ; transcript_support_level 4 ; transcript_type lncRNA
ATIC--LINC00607 HAVANA RNA 24764 29448 . + . FI_gene_label "LINC00607^ENSG00000235770.6" ; ID "ATIC--LINC00607^ENST00000413563.6" ; Parent "ATIC--LINC00607^LINC00607^ENSG00000235770.6" ; exon_id "ENSE00003872244.1" ; exon_number 1 ; gene_id "ATIC--LINC00607^LINC00607^ENSG00000235770.6" ; gene_name LINC00607 ; gene_type lncRNA ; havana_gene "OTTHUMG00000154834.11" ; havana_transcript "OTTHUMT00000524151.1" ; hgnc_id "HGNC:43944" ; level 2 ; orig_coord_info "chr2,215827352,215827367,-" ; tag TAGENE ; transcript_id "ATIC--LINC00607^ENST00000413563.6" ; transcript_name "LINC00607-201" ; transcript_support_level 4 ; transcript_type lncRNA
L1 and L2 created:
BCAS3--PPIAP55 HAVANA gene 59529 60018 . + . FI_gene_label "PPIAP55^ENSG00000228979.4" ; ID "BCAS3--PPIAP55^PPIAP55^ENSG00000228979.4" ; exon_id "ENSE00003701662.1" ; exon_number 1 ; gene_id "BCAS3--PPIAP55^PPIAP55^ENSG00000228979.4" ; gene_name PPIAP55 ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000185386.1" ; havana_transcript "OTTHUMT00000470391.1" ; hgnc_id "HGNC:53679" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr17,63471604,63472093,+" ; tag pseudo_consens basic ; transcript_id "BCAS3--PPIAP55^ENST00000606284.1" ; transcript_name "PPIAP55-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
BCAS3--PPIAP55 HAVANA RNA 59529 60018 . + . FI_gene_label "PPIAP55^ENSG00000228979.4" ; ID "BCAS3--PPIAP55^ENST00000606284.1" ; Parent "BCAS3--PPIAP55^PPIAP55^ENSG00000228979.4" ; exon_id "ENSE00003701662.1" ; exon_number 1 ; gene_id "BCAS3--PPIAP55^PPIAP55^ENSG00000228979.4" ; gene_name PPIAP55 ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000185386.1" ; havana_transcript "OTTHUMT00000470391.1" ; hgnc_id "HGNC:53679" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr17,63471604,63472093,+" ; tag pseudo_consens basic ; transcript_id "BCAS3--PPIAP55^ENST00000606284.1" ; transcript_name "PPIAP55-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
L1 and L2 created:
CASC15--DST HAVANA gene 18078 66802 . + . FI_gene_label "CASC15^ENSG00000272168.8" ; ID "CASC15--DST^CASC15^ENSG00000272168.8" ; exon_id "ENSE00003696426.1" ; exon_number 1 ; gene_id "CASC15--DST^CASC15^ENSG00000272168.8" ; gene_name CASC15 ; gene_type lncRNA ; havana_gene "OTTHUMG00000014345.88" ; havana_transcript "OTTHUMT00000470987.2" ; hgnc_id "HGNC:28245" ; level 2 ; orig_coord_info "chr6,21898720,21898784,+" ; tag basic ; transcript_id "CASC15--DST^ENST00000444265.6" ; transcript_name "CASC15-201" ; transcript_support_level 1 ; transcript_type lncRNA
CASC15--DST HAVANA RNA 18078 66802 . + . FI_gene_label "CASC15^ENSG00000272168.8" ; ID "CASC15--DST^ENST00000444265.6" ; Parent "CASC15--DST^CASC15^ENSG00000272168.8" ; exon_id "ENSE00003696426.1" ; exon_number 1 ; gene_id "CASC15--DST^CASC15^ENSG00000272168.8" ; gene_name CASC15 ; gene_type lncRNA ; havana_gene "OTTHUMG00000014345.88" ; havana_transcript "OTTHUMT00000470987.2" ; hgnc_id "HGNC:28245" ; level 2 ; orig_coord_info "chr6,21898720,21898784,+" ; tag basic ; transcript_id "CASC15--DST^ENST00000444265.6" ; transcript_name "CASC15-201" ; transcript_support_level 1 ; transcript_type lncRNA
L1 and L2 created:
CUEDC1--AC005670.3 HAVANA gene 25338 47357 . + . FI_gene_label "AC005670.3^ENSG00000262879.6" ; ID "CUEDC1--AC005670.3^AC005670.3^ENSG00000262879.6" ; exon_id "ENSE00003857049.1" ; exon_number 1 ; gene_id "CUEDC1--AC005670.3^AC005670.3^ENSG00000262879.6" ; gene_name "AC005670.3" ; gene_type lncRNA ; havana_gene "OTTHUMG00000178188.23" ; havana_transcript "OTTHUMT00000440922.2" ; level 2 ; orig_coord_info "chr17,47067414,47067513,-" ; tag TAGENE ; transcript_id "CUEDC1--AC005670.3^ENST00000570314.2" ; transcript_name "AC005670.3-210" ; transcript_support_level 3 ; transcript_type lncRNA
CUEDC1--AC005670.3 HAVANA RNA 25338 47357 . + . FI_gene_label "AC005670.3^ENSG00000262879.6" ; ID "CUEDC1--AC005670.3^ENST00000570314.2" ; Parent "CUEDC1--AC005670.3^AC005670.3^ENSG00000262879.6" ; exon_id "ENSE00003857049.1" ; exon_number 1 ; gene_id "CUEDC1--AC005670.3^AC005670.3^ENSG00000262879.6" ; gene_name "AC005670.3" ; gene_type lncRNA ; havana_gene "OTTHUMG00000178188.23" ; havana_transcript "OTTHUMT00000440922.2" ; level 2 ; orig_coord_info "chr17,47067414,47067513,-" ; tag TAGENE ; transcript_id "CUEDC1--AC005670.3^ENST00000570314.2" ; transcript_name "AC005670.3-210" ; transcript_support_level 3 ; transcript_type lncRNA
L1 and L2 created:
F11R--AL590408.1 HAVANA gene 12552 13103 . + . FI_gene_label "AL590408.1^ENSG00000227818.1" ; ID "F11R--AL590408.1^AL590408.1^ENSG00000227818.1" ; exon_id "ENSE00001711844.1" ; exon_number 1 ; gene_id "F11R--AL590408.1^AL590408.1^ENSG00000227818.1" ; gene_name "AL590408.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000024048.1" ; havana_transcript "OTTHUMT00000060554.1" ; level 2 ; orig_coord_info "chr1,162039016,162039243,+" ; tag basic ; transcript_id "F11R--AL590408.1^ENST00000430905.1" ; transcript_name "AL590408.1-201" ; transcript_support_level 3 ; transcript_type lncRNA
F11R--AL590408.1 HAVANA RNA 12552 13103 . + . FI_gene_label "AL590408.1^ENSG00000227818.1" ; ID "F11R--AL590408.1^ENST00000430905.1" ; Parent "F11R--AL590408.1^AL590408.1^ENSG00000227818.1" ; exon_id "ENSE00001711844.1" ; exon_number 1 ; gene_id "F11R--AL590408.1^AL590408.1^ENSG00000227818.1" ; gene_name "AL590408.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000024048.1" ; havana_transcript "OTTHUMT00000060554.1" ; level 2 ; orig_coord_info "chr1,162039016,162039243,+" ; tag basic ; transcript_id "F11R--AL590408.1^ENST00000430905.1" ; transcript_name "AL590408.1-201" ; transcript_support_level 3 ; transcript_type lncRNA
L1 and L2 created:
FBXL20--AC005914.1 HAVANA gene 29529 32053 . + . FI_gene_label "AC005914.1^ENSG00000287886.1" ; ID "FBXL20--AC005914.1^AC005914.1^ENSG00000287886.1" ; exon_id "ENSE00003875891.1" ; exon_number 1 ; gene_id "FBXL20--AC005914.1^AC005914.1^ENSG00000287886.1" ; gene_name "AC005914.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000194817.1" ; havana_transcript "OTTHUMT00000522389.1" ; level 2 ; orig_coord_info "chr20,53738728,53738858,+" ; tag basic TAGENE ; transcript_id "FBXL20--AC005914.1^ENST00000663196.1" ; transcript_name "AC005914.1-201" ; transcript_type lncRNA
FBXL20--AC005914.1 HAVANA RNA 29529 32053 . + . FI_gene_label "AC005914.1^ENSG00000287886.1" ; ID "FBXL20--AC005914.1^ENST00000663196.1" ; Parent "FBXL20--AC005914.1^AC005914.1^ENSG00000287886.1" ; exon_id "ENSE00003875891.1" ; exon_number 1 ; gene_id "FBXL20--AC005914.1^AC005914.1^ENSG00000287886.1" ; gene_name "AC005914.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000194817.1" ; havana_transcript "OTTHUMT00000522389.1" ; level 2 ; orig_coord_info "chr20,53738728,53738858,+" ; tag basic TAGENE ; transcript_id "FBXL20--AC005914.1^ENST00000663196.1" ; transcript_name "AC005914.1-201" ; transcript_type lncRNA
L1 and L2 created:
FBXL20--AC091132.2 HAVANA gene 29529 33297 . + . FI_gene_label "AC091132.2^ENSG00000236234.1" ; ID "FBXL20--AC091132.2^AC091132.2^ENSG00000236234.1" ; exon_id "ENSE00001614074.1" ; exon_number 1 ; gene_id "FBXL20--AC091132.2^AC091132.2^ENSG00000236234.1" ; gene_name "AC091132.2" ; gene_type lncRNA ; havana_gene "OTTHUMG00000132554.3" ; havana_transcript "OTTHUMT00000255756.1" ; level 2 ; orig_coord_info "chr17,45452844,45453088,+" ; tag dotter_confirmed basic ; transcript_id "FBXL20--AC091132.2^ENST00000433601.1" ; transcript_name "AC091132.2-201" ; transcript_support_level 3 ; transcript_type lncRNA
FBXL20--AC091132.2 HAVANA RNA 29529 33297 . + . FI_gene_label "AC091132.2^ENSG00000236234.1" ; ID "FBXL20--AC091132.2^ENST00000433601.1" ; Parent "FBXL20--AC091132.2^AC091132.2^ENSG00000236234.1" ; exon_id "ENSE00001614074.1" ; exon_number 1 ; gene_id "FBXL20--AC091132.2^AC091132.2^ENSG00000236234.1" ; gene_name "AC091132.2" ; gene_type lncRNA ; havana_gene "OTTHUMG00000132554.3" ; havana_transcript "OTTHUMT00000255756.1" ; level 2 ; orig_coord_info "chr17,45452844,45453088,+" ; tag dotter_confirmed basic ; transcript_id "FBXL20--AC091132.2^ENST00000433601.1" ; transcript_name "AC091132.2-201" ; transcript_support_level 3 ; transcript_type lncRNA
L1 and L2 created:
FSIP1--AC013652.1 HAVANA gene 21835 37275 . + . FI_gene_label "AC013652.1^ENSG00000259345.7" ; ID "FSIP1--AC013652.1^AC013652.1^ENSG00000259345.7" ; exon_id "ENSE00002558629.1" ; exon_number 1 ; gene_id "FSIP1--AC013652.1^AC013652.1^ENSG00000259345.7" ; gene_name "AC013652.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000172466.4" ; havana_transcript "OTTHUMT00000418683.1" ; level 2 ; orig_coord_info "chr15,39427098,39427195,-" ; tag basic ; transcript_id "FSIP1--AC013652.1^ENST00000558209.1" ; transcript_name "AC013652.1-205" ; transcript_support_level 3 ; transcript_type lncRNA
FSIP1--AC013652.1 HAVANA RNA 21835 37275 . + . FI_gene_label "AC013652.1^ENSG00000259345.7" ; ID "FSIP1--AC013652.1^ENST00000558209.1" ; Parent "FSIP1--AC013652.1^AC013652.1^ENSG00000259345.7" ; exon_id "ENSE00002558629.1" ; exon_number 1 ; gene_id "FSIP1--AC013652.1^AC013652.1^ENSG00000259345.7" ; gene_name "AC013652.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000172466.4" ; havana_transcript "OTTHUMT00000418683.1" ; level 2 ; orig_coord_info "chr15,39427098,39427195,-" ; tag basic ; transcript_id "FSIP1--AC013652.1^ENST00000558209.1" ; transcript_name "AC013652.1-205" ; transcript_support_level 3 ; transcript_type lncRNA
L1 and L2 created:
GRB7--AC005670.3 HAVANA gene 17354 39373 . + . FI_gene_label "AC005670.3^ENSG00000262879.6" ; ID "GRB7--AC005670.3^AC005670.3^ENSG00000262879.6" ; exon_id "ENSE00003857049.1" ; exon_number 1 ; gene_id "GRB7--AC005670.3^AC005670.3^ENSG00000262879.6" ; gene_name "AC005670.3" ; gene_type lncRNA ; havana_gene "OTTHUMG00000178188.23" ; havana_transcript "OTTHUMT00000440922.2" ; level 2 ; orig_coord_info "chr17,47067414,47067513,-" ; tag TAGENE ; transcript_id "GRB7--AC005670.3^ENST00000570314.2" ; transcript_name "AC005670.3-210" ; transcript_support_level 3 ; transcript_type lncRNA
GRB7--AC005670.3 HAVANA RNA 17354 39373 . + . FI_gene_label "AC005670.3^ENSG00000262879.6" ; ID "GRB7--AC005670.3^ENST00000570314.2" ; Parent "GRB7--AC005670.3^AC005670.3^ENSG00000262879.6" ; exon_id "ENSE00003857049.1" ; exon_number 1 ; gene_id "GRB7--AC005670.3^AC005670.3^ENSG00000262879.6" ; gene_name "AC005670.3" ; gene_type lncRNA ; havana_gene "OTTHUMG00000178188.23" ; havana_transcript "OTTHUMT00000440922.2" ; level 2 ; orig_coord_info "chr17,47067414,47067513,-" ; tag TAGENE ; transcript_id "GRB7--AC005670.3^ENST00000570314.2" ; transcript_name "AC005670.3-210" ; transcript_support_level 3 ; transcript_type lncRNA
L1 and L2 created:
KANSL1--AC103810.9 HAVANA gene 46218 46560 . + . FI_gene_label "AC103810.9^ENSG00000272400.1" ; ID "KANSL1--AC103810.9^AC103810.9^ENSG00000272400.1" ; exon_id "ENSE00003694917.1" ; exon_number 1 ; gene_id "KANSL1--AC103810.9^AC103810.9^ENSG00000272400.1" ; gene_name "AC103810.9" ; gene_type unprocessed_pseudogene ; havana_gene "OTTHUMG00000185415.1" ; havana_transcript "OTTHUMT00000470479.1" ; level 2 ; ont "PGO:0000005" ; orig_coord_info "chr17,64847386,64847728,+" ; tag basic ; transcript_id "KANSL1--AC103810.9^ENST00000606504.1" ; transcript_name "AC103810.9-201" ; transcript_support_level NA ; transcript_type unprocessed_pseudogene
KANSL1--AC103810.9 HAVANA RNA 46218 46560 . + . FI_gene_label "AC103810.9^ENSG00000272400.1" ; ID "KANSL1--AC103810.9^ENST00000606504.1" ; Parent "KANSL1--AC103810.9^AC103810.9^ENSG00000272400.1" ; exon_id "ENSE00003694917.1" ; exon_number 1 ; gene_id "KANSL1--AC103810.9^AC103810.9^ENSG00000272400.1" ; gene_name "AC103810.9" ; gene_type unprocessed_pseudogene ; havana_gene "OTTHUMG00000185415.1" ; havana_transcript "OTTHUMT00000470479.1" ; level 2 ; ont "PGO:0000005" ; orig_coord_info "chr17,64847386,64847728,+" ; tag basic ; transcript_id "KANSL1--AC103810.9^ENST00000606504.1" ; transcript_name "AC103810.9-201" ; transcript_support_level NA ; transcript_type unprocessed_pseudogene
L1 and L2 created:
KLHL22--SMPD4P1 HAVANA gene 24014 36986 . + . FI_gene_label "SMPD4P1^ENSG00000223553.6" ; ID "KLHL22--SMPD4P1^SMPD4P1^ENSG00000223553.6" ; exon_id "ENSE00001676552.1" ; exon_number 1 ; gene_id "KLHL22--SMPD4P1^SMPD4P1^ENSG00000223553.6" ; gene_name SMPD4P1 ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000030245.6" ; havana_transcript "OTTHUMT00000075099.6" ; hgnc_id "HGNC:39673" ; level 1 ; ont "PGO:0000005" "PGO:0000019" ; orig_coord_info "chr22,20626096,20626134,-" ; tag pseudo_consens basic ; transcript_id "KLHL22--SMPD4P1^ENST00000416717.6" ; transcript_name "SMPD4P1-201" ; transcript_support_level NA ; transcript_type transcribed_unprocessed_pseudogene
KLHL22--SMPD4P1 HAVANA RNA 24014 36986 . + . FI_gene_label "SMPD4P1^ENSG00000223553.6" ; ID "KLHL22--SMPD4P1^ENST00000416717.6" ; Parent "KLHL22--SMPD4P1^SMPD4P1^ENSG00000223553.6" ; exon_id "ENSE00001676552.1" ; exon_number 1 ; gene_id "KLHL22--SMPD4P1^SMPD4P1^ENSG00000223553.6" ; gene_name SMPD4P1 ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000030245.6" ; havana_transcript "OTTHUMT00000075099.6" ; hgnc_id "HGNC:39673" ; level 1 ; ont "PGO:0000005" "PGO:0000019" ; orig_coord_info "chr22,20626096,20626134,-" ; tag pseudo_consens basic ; transcript_id "KLHL22--SMPD4P1^ENST00000416717.6" ; transcript_name "SMPD4P1-201" ; transcript_support_level NA ; transcript_type transcribed_unprocessed_pseudogene
L1 and L2 created:
LINC-ROR--LRMDA HAVANA gene 1001 10616 . + . FI_gene_label "LINC-ROR^ENSG00000258609.3" ; ID "LINC-ROR--LRMDA^LINC-ROR^ENSG00000258609.3" ; exon_id "ENSE00002471664.1" ; exon_number 1 ; gene_id "LINC-ROR--LRMDA^LINC-ROR^ENSG00000258609.3" ; gene_name "LINC-ROR" ; gene_type lncRNA ; havana_gene "OTTHUMG00000171587.3" ; havana_transcript "OTTHUMT00000414322.3" ; hgnc_id "HGNC:43773" ; level 2 ; orig_coord_info "chr18,57071904,57072119,-" ; tag basic ; transcript_id "LINC-ROR--LRMDA^ENST00000553704.3" ; transcript_name "LINC-ROR-201" ; transcript_support_level 1 ; transcript_type lncRNA
LINC-ROR--LRMDA HAVANA RNA 1001 10616 . + . FI_gene_label "LINC-ROR^ENSG00000258609.3" ; ID "LINC-ROR--LRMDA^ENST00000553704.3" ; Parent "LINC-ROR--LRMDA^LINC-ROR^ENSG00000258609.3" ; exon_id "ENSE00002471664.1" ; exon_number 1 ; gene_id "LINC-ROR--LRMDA^LINC-ROR^ENSG00000258609.3" ; gene_name "LINC-ROR" ; gene_type lncRNA ; havana_gene "OTTHUMG00000171587.3" ; havana_transcript "OTTHUMT00000414322.3" ; hgnc_id "HGNC:43773" ; level 2 ; orig_coord_info "chr18,57071904,57072119,-" ; tag basic ; transcript_id "LINC-ROR--LRMDA^ENST00000553704.3" ; transcript_name "LINC-ROR-201" ; transcript_support_level 1 ; transcript_type lncRNA
L1 and L2 created:
LINC01953--IKZF2 HAVANA gene 1001 2717 . + . FI_gene_label "LINC01953^ENSG00000236193.3" ; ID "LINC01953--IKZF2^LINC01953^ENSG00000236193.3" ; exon_id "ENSE00001668924.1" ; exon_number 1 ; gene_id "LINC01953--IKZF2^LINC01953^ENSG00000236193.3" ; gene_name LINC01953 ; gene_type lncRNA ; havana_gene "OTTHUMG00000186255.1" ; havana_transcript "OTTHUMT00000472502.1" ; hgnc_id "HGNC:52776" ; level 2 ; orig_coord_info "chr2,213167393,213167712,-" ; tag basic ; transcript_id "LINC01953--IKZF2^ENST00000426870.1" ; transcript_name "LINC01953-201" ; transcript_support_level 5 ; transcript_type lncRNA
LINC01953--IKZF2 HAVANA RNA 1001 2717 . + . FI_gene_label "LINC01953^ENSG00000236193.3" ; ID "LINC01953--IKZF2^ENST00000426870.1" ; Parent "LINC01953--IKZF2^LINC01953^ENSG00000236193.3" ; exon_id "ENSE00001668924.1" ; exon_number 1 ; gene_id "LINC01953--IKZF2^LINC01953^ENSG00000236193.3" ; gene_name LINC01953 ; gene_type lncRNA ; havana_gene "OTTHUMG00000186255.1" ; havana_transcript "OTTHUMT00000472502.1" ; hgnc_id "HGNC:52776" ; level 2 ; orig_coord_info "chr2,213167393,213167712,-" ; tag basic ; transcript_id "LINC01953--IKZF2^ENST00000426870.1" ; transcript_name "LINC01953-201" ; transcript_support_level 5 ; transcript_type lncRNA
L1 and L2 created:
LINC02210--LRRC37A HAVANA gene 6724 8993 . + . FI_gene_label "LINC02210^ENSG00000204650.14" ; ID "LINC02210--LRRC37A^LINC02210^ENSG00000204650.14" ; exon_id "ENSE00001797982.1" ; exon_number 1 ; gene_id "LINC02210--LRRC37A^LINC02210^ENSG00000204650.14" ; gene_name LINC02210 ; gene_type transcribed_unitary_pseudogene ; havana_gene "OTTHUMG00000132521.5" ; havana_transcript "OTTHUMT00000255707.3" ; hgnc_id "HGNC:26327" ; level 2 ; orig_coord_info "chr17,45633049,45633174,+" ; tag basic ; transcript_id "LINC02210--LRRC37A^ENST00000444561.2" ; transcript_name "LINC02210-201" ; transcript_support_level NA ; transcript_type transcribed_unitary_pseudogene
LINC02210--LRRC37A HAVANA RNA 6724 8993 . + . FI_gene_label "LINC02210^ENSG00000204650.14" ; ID "LINC02210--LRRC37A^ENST00000444561.2" ; Parent "LINC02210--LRRC37A^LINC02210^ENSG00000204650.14" ; exon_id "ENSE00001797982.1" ; exon_number 1 ; gene_id "LINC02210--LRRC37A^LINC02210^ENSG00000204650.14" ; gene_name LINC02210 ; gene_type transcribed_unitary_pseudogene ; havana_gene "OTTHUMG00000132521.5" ; havana_transcript "OTTHUMT00000255707.3" ; hgnc_id "HGNC:26327" ; level 2 ; orig_coord_info "chr17,45633049,45633174,+" ; tag basic ; transcript_id "LINC02210--LRRC37A^ENST00000444561.2" ; transcript_name "LINC02210-201" ; transcript_support_level NA ; transcript_type transcribed_unitary_pseudogene
L1 and L2 created:
LRRC37A3--AC103810.9 HAVANA gene 25667 26009 . + . FI_gene_label "AC103810.9^ENSG00000272400.1" ; ID "LRRC37A3--AC103810.9^AC103810.9^ENSG00000272400.1" ; exon_id "ENSE00003694917.1" ; exon_number 1 ; gene_id "LRRC37A3--AC103810.9^AC103810.9^ENSG00000272400.1" ; gene_name "AC103810.9" ; gene_type unprocessed_pseudogene ; havana_gene "OTTHUMG00000185415.1" ; havana_transcript "OTTHUMT00000470479.1" ; level 2 ; ont "PGO:0000005" ; orig_coord_info "chr17,64847386,64847728,+" ; tag basic ; transcript_id "LRRC37A3--AC103810.9^ENST00000606504.1" ; transcript_name "AC103810.9-201" ; transcript_support_level NA ; transcript_type unprocessed_pseudogene
LRRC37A3--AC103810.9 HAVANA RNA 25667 26009 . + . FI_gene_label "AC103810.9^ENSG00000272400.1" ; ID "LRRC37A3--AC103810.9^ENST00000606504.1" ; Parent "LRRC37A3--AC103810.9^AC103810.9^ENSG00000272400.1" ; exon_id "ENSE00003694917.1" ; exon_number 1 ; gene_id "LRRC37A3--AC103810.9^AC103810.9^ENSG00000272400.1" ; gene_name "AC103810.9" ; gene_type unprocessed_pseudogene ; havana_gene "OTTHUMG00000185415.1" ; havana_transcript "OTTHUMT00000470479.1" ; level 2 ; ont "PGO:0000005" ; orig_coord_info "chr17,64847386,64847728,+" ; tag basic ; transcript_id "LRRC37A3--AC103810.9^ENST00000606504.1" ; transcript_name "AC103810.9-201" ; transcript_support_level NA ; transcript_type unprocessed_pseudogene
L1 and L2 created:
MAPK8--AGAP12P HAVANA gene 24906 33263 . + . FI_gene_label "AGAP12P^ENSG00000265018.6" ; ID "MAPK8--AGAP12P^AGAP12P^ENSG00000265018.6" ; exon_id "ENSE00002718806.2" ; exon_number 1 ; gene_id "MAPK8--AGAP12P^AGAP12P^ENSG00000265018.6" ; gene_name AGAP12P ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000018164.4" ; havana_transcript "OTTHUMT00000047912.4" ; hgnc_id "HGNC:23661" ; level 1 ; ont "PGO:0000005" "PGO:0000019" ; orig_coord_info "chr10,48031376,48031599,-" ; tag pseudo_consens basic ; transcript_id "MAPK8--AGAP12P^ENST00000585227.6" ; transcript_name "AGAP12P-201" ; transcript_support_level NA ; transcript_type transcribed_unprocessed_pseudogene
MAPK8--AGAP12P HAVANA RNA 24906 33263 . + . FI_gene_label "AGAP12P^ENSG00000265018.6" ; ID "MAPK8--AGAP12P^ENST00000585227.6" ; Parent "MAPK8--AGAP12P^AGAP12P^ENSG00000265018.6" ; exon_id "ENSE00002718806.2" ; exon_number 1 ; gene_id "MAPK8--AGAP12P^AGAP12P^ENSG00000265018.6" ; gene_name AGAP12P ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000018164.4" ; havana_transcript "OTTHUMT00000047912.4" ; hgnc_id "HGNC:23661" ; level 1 ; ont "PGO:0000005" "PGO:0000019" ; orig_coord_info "chr10,48031376,48031599,-" ; tag pseudo_consens basic ; transcript_id "MAPK8--AGAP12P^ENST00000585227.6" ; transcript_name "AGAP12P-201" ; transcript_support_level NA ; transcript_type transcribed_unprocessed_pseudogene
L1 and L2 created:
MAPK8--AL591684.1 HAVANA gene 24865 26098 . + . FI_gene_label "AL591684.1^ENSG00000224919.1" ; ID "MAPK8--AL591684.1^AL591684.1^ENSG00000224919.1" ; exon_id "ENSE00002522619.1" ; exon_number 1 ; gene_id "MAPK8--AL591684.1^AL591684.1^ENSG00000224919.1" ; gene_name "AL591684.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000018119.1" ; havana_transcript "OTTHUMT00000047850.1" ; level 2 ; orig_coord_info "chr10,47496212,47496298,+" ; tag basic ; transcript_id "MAPK8--AL591684.1^ENST00000434533.1" ; transcript_name "AL591684.1-201" ; transcript_support_level 5 ; transcript_type lncRNA
MAPK8--AL591684.1 HAVANA RNA 24865 26098 . + . FI_gene_label "AL591684.1^ENSG00000224919.1" ; ID "MAPK8--AL591684.1^ENST00000434533.1" ; Parent "MAPK8--AL591684.1^AL591684.1^ENSG00000224919.1" ; exon_id "ENSE00002522619.1" ; exon_number 1 ; gene_id "MAPK8--AL591684.1^AL591684.1^ENSG00000224919.1" ; gene_name "AL591684.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000018119.1" ; havana_transcript "OTTHUMT00000047850.1" ; level 2 ; orig_coord_info "chr10,47496212,47496298,+" ; tag basic ; transcript_id "MAPK8--AL591684.1^ENST00000434533.1" ; transcript_name "AL591684.1-201" ; transcript_support_level 5 ; transcript_type lncRNA
L1 and L2 created:
MECOM--AC025033.1 HAVANA gene 35732 35925 . + . FI_gene_label "AC025033.1^ENSG00000243165.1" ; ID "MECOM--AC025033.1^AC025033.1^ENSG00000243165.1" ; exon_id "ENSE00001947851.1" ; exon_number 1 ; gene_id "MECOM--AC025033.1^AC025033.1^ENSG00000243165.1" ; gene_name "AC025033.1" ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000158806.1" ; havana_transcript "OTTHUMT00000352283.1" ; level 2 ; ont "PGO:0000004" ; orig_coord_info "chr3,158626656,158626849,-" ; tag basic ; transcript_id "MECOM--AC025033.1^ENST00000463883.1" ; transcript_name "AC025033.1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
MECOM--AC025033.1 HAVANA RNA 35732 35925 . + . FI_gene_label "AC025033.1^ENSG00000243165.1" ; ID "MECOM--AC025033.1^ENST00000463883.1" ; Parent "MECOM--AC025033.1^AC025033.1^ENSG00000243165.1" ; exon_id "ENSE00001947851.1" ; exon_number 1 ; gene_id "MECOM--AC025033.1^AC025033.1^ENSG00000243165.1" ; gene_name "AC025033.1" ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000158806.1" ; havana_transcript "OTTHUMT00000352283.1" ; level 2 ; ont "PGO:0000004" ; orig_coord_info "chr3,158626656,158626849,-" ; tag basic ; transcript_id "MECOM--AC025033.1^ENST00000463883.1" ; transcript_name "AC025033.1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
L1 and L2 created:
MECOM--AC106707.1 HAVANA gene 35732 41960 . + . FI_gene_label "AC106707.1^ENSG00000243150.6" ; ID "MECOM--AC106707.1^AC106707.1^ENSG00000243150.6" ; exon_id "ENSE00001866937.1" ; exon_number 1 ; gene_id "MECOM--AC106707.1^AC106707.1^ENSG00000243150.6" ; gene_name "AC106707.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000158791.5" ; havana_transcript "OTTHUMT00000352221.2" ; level 2 ; orig_coord_info "chr3,158570171,158571066,-" ; tag basic TAGENE ; transcript_id "MECOM--AC106707.1^ENST00000475981.6" ; transcript_name "AC106707.1-201" ; transcript_support_level 2 ; transcript_type lncRNA
MECOM--AC106707.1 HAVANA RNA 35732 41960 . + . FI_gene_label "AC106707.1^ENSG00000243150.6" ; ID "MECOM--AC106707.1^ENST00000475981.6" ; Parent "MECOM--AC106707.1^AC106707.1^ENSG00000243150.6" ; exon_id "ENSE00001866937.1" ; exon_number 1 ; gene_id "MECOM--AC106707.1^AC106707.1^ENSG00000243150.6" ; gene_name "AC106707.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000158791.5" ; havana_transcript "OTTHUMT00000352221.2" ; level 2 ; orig_coord_info "chr3,158570171,158571066,-" ; tag basic TAGENE ; transcript_id "MECOM--AC106707.1^ENST00000475981.6" ; transcript_name "AC106707.1-201" ; transcript_support_level 2 ; transcript_type lncRNA
L1 and L2 created:
MSI2--AC005920.1 HAVANA gene 57047 60100 . + . FI_gene_label "AC005920.1^ENSG00000247011.2" ; ID "MSI2--AC005920.1^AC005920.1^ENSG00000247011.2" ; exon_id "ENSE00001983905.1" ; exon_number 1 ; gene_id "MSI2--AC005920.1^AC005920.1^ENSG00000247011.2" ; gene_name "AC005920.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000162317.1" ; havana_transcript "OTTHUMT00000368558.1" ; level 2 ; orig_coord_info "chr17,50943397,50944713,-" ; tag basic ; transcript_id "MSI2--AC005920.1^ENST00000501718.2" ; transcript_name "AC005920.1-201" ; transcript_support_level 2 ; transcript_type lncRNA
MSI2--AC005920.1 HAVANA RNA 57047 60100 . + . FI_gene_label "AC005920.1^ENSG00000247011.2" ; ID "MSI2--AC005920.1^ENST00000501718.2" ; Parent "MSI2--AC005920.1^AC005920.1^ENSG00000247011.2" ; exon_id "ENSE00001983905.1" ; exon_number 1 ; gene_id "MSI2--AC005920.1^AC005920.1^ENSG00000247011.2" ; gene_name "AC005920.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000162317.1" ; havana_transcript "OTTHUMT00000368558.1" ; level 2 ; orig_coord_info "chr17,50943397,50944713,-" ; tag basic ; transcript_id "MSI2--AC005920.1^ENST00000501718.2" ; transcript_name "AC005920.1-201" ; transcript_support_level 2 ; transcript_type lncRNA
L1 and L2 created:
MYNN--CR381670.2 HAVANA gene 15666 18819 . + . FI_gene_label "CR381670.2^ENSG00000286033.1" ; ID "MYNN--CR381670.2^CR381670.2^ENSG00000286033.1" ; exon_id "ENSE00003848369.1" ; exon_number 1 ; gene_id "MYNN--CR381670.2^CR381670.2^ENSG00000286033.1" ; gene_name "CR381670.2" ; gene_type lncRNA ; havana_gene "OTTHUMG00000192810.1" ; havana_transcript "OTTHUMT00000499237.1" ; level 2 ; orig_coord_info "chr21,8836527,8836565,-" ; tag basic ; transcript_id "MYNN--CR381670.2^ENST00000651312.1" ; transcript_name "CR381670.2-201" ; transcript_type lncRNA
MYNN--CR381670.2 HAVANA RNA 15666 18819 . + . FI_gene_label "CR381670.2^ENSG00000286033.1" ; ID "MYNN--CR381670.2^ENST00000651312.1" ; Parent "MYNN--CR381670.2^CR381670.2^ENSG00000286033.1" ; exon_id "ENSE00003848369.1" ; exon_number 1 ; gene_id "MYNN--CR381670.2^CR381670.2^ENSG00000286033.1" ; gene_name "CR381670.2" ; gene_type lncRNA ; havana_gene "OTTHUMG00000192810.1" ; havana_transcript "OTTHUMT00000499237.1" ; level 2 ; orig_coord_info "chr21,8836527,8836565,-" ; tag basic ; transcript_id "MYNN--CR381670.2^ENST00000651312.1" ; transcript_name "CR381670.2-201" ; transcript_type lncRNA
L1 and L2 created:
NBR2--IKZF3 HAVANA gene 1090 7000 . + . FI_gene_label "NBR2^ENSG00000198496.12" ; ID "NBR2--IKZF3^NBR2^ENSG00000198496.12" ; exon_id "ENSE00001852356.1" ; exon_number 1 ; gene_id "NBR2--IKZF3^NBR2^ENSG00000198496.12" ; gene_name NBR2 ; gene_type lncRNA ; havana_gene "OTTHUMG00000192466.2" ; havana_transcript "OTTHUMT00000277177.2" ; hgnc_id "HGNC:20691" ; level 2 ; orig_coord_info "chr17,43125640,43125770,+" ; transcript_id "NBR2--IKZF3^ENST00000356906.7" ; transcript_name "NBR2-201" ; transcript_support_level 1 ; transcript_type lncRNA
NBR2--IKZF3 HAVANA RNA 1090 7000 . + . FI_gene_label "NBR2^ENSG00000198496.12" ; ID "NBR2--IKZF3^ENST00000356906.7" ; Parent "NBR2--IKZF3^NBR2^ENSG00000198496.12" ; exon_id "ENSE00001852356.1" ; exon_number 1 ; gene_id "NBR2--IKZF3^NBR2^ENSG00000198496.12" ; gene_name NBR2 ; gene_type lncRNA ; havana_gene "OTTHUMG00000192466.2" ; havana_transcript "OTTHUMT00000277177.2" ; hgnc_id "HGNC:20691" ; level 2 ; orig_coord_info "chr17,43125640,43125770,+" ; transcript_id "NBR2--IKZF3^ENST00000356906.7" ; transcript_name "NBR2-201" ; transcript_support_level 1 ; transcript_type lncRNA
L1 and L2 created:
NPEPPSP1--SEH1L HAVANA gene 1041 11330 . + . FI_gene_label "NPEPPSP1^ENSG00000274487.2" ; ID "NPEPPSP1--SEH1L^NPEPPSP1^ENSG00000274487.2" ; exon_id "ENSE00002348583.2" ; exon_number 1 ; gene_id "NPEPPSP1--SEH1L^NPEPPSP1^ENSG00000274487.2" ; gene_name NPEPPSP1 ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000188488.3" ; havana_transcript "OTTHUMT00000477409.2" ; hgnc_id "HGNC:44259" ; level 2 ; ont "PGO:0000005" "PGO:0000019" ; orig_coord_info "chr17,38256898,38257152,-" ; tag basic ; transcript_id "NPEPPSP1--SEH1L^ENST00000620148.2" ; transcript_name "NPEPPSP1-201" ; transcript_support_level NA ; transcript_type transcribed_unprocessed_pseudogene
NPEPPSP1--SEH1L HAVANA RNA 1041 11330 . + . FI_gene_label "NPEPPSP1^ENSG00000274487.2" ; ID "NPEPPSP1--SEH1L^ENST00000620148.2" ; Parent "NPEPPSP1--SEH1L^NPEPPSP1^ENSG00000274487.2" ; exon_id "ENSE00002348583.2" ; exon_number 1 ; gene_id "NPEPPSP1--SEH1L^NPEPPSP1^ENSG00000274487.2" ; gene_name NPEPPSP1 ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000188488.3" ; havana_transcript "OTTHUMT00000477409.2" ; hgnc_id "HGNC:44259" ; level 2 ; ont "PGO:0000005" "PGO:0000019" ; orig_coord_info "chr17,38256898,38257152,-" ; tag basic ; transcript_id "NPEPPSP1--SEH1L^ENST00000620148.2" ; transcript_name "NPEPPSP1-201" ; transcript_support_level NA ; transcript_type transcribed_unprocessed_pseudogene
L1 and L2 created:
PBX1--LINC00824 HAVANA gene 59437 62190 . + . FI_gene_label "LINC00824^ENSG00000254275.6" ; ID "PBX1--LINC00824^LINC00824^ENSG00000254275.6" ; exon_id "ENSE00002124638.1" ; exon_number 1 ; gene_id "PBX1--LINC00824^LINC00824^ENSG00000254275.6" ; gene_name LINC00824 ; gene_type lncRNA ; havana_gene "OTTHUMG00000165050.1" ; havana_transcript "OTTHUMT00000381573.1" ; hgnc_id "HGNC:50281" ; level 2 ; orig_coord_info "chr8,128415366,128415381,-" ; tag dotter_confirmed basic ; transcript_id "PBX1--LINC00824^ENST00000517583.1" ; transcript_name "LINC00824-201" ; transcript_support_level 5 ; transcript_type lncRNA
PBX1--LINC00824 HAVANA RNA 59437 62190 . + . FI_gene_label "LINC00824^ENSG00000254275.6" ; ID "PBX1--LINC00824^ENST00000517583.1" ; Parent "PBX1--LINC00824^LINC00824^ENSG00000254275.6" ; exon_id "ENSE00002124638.1" ; exon_number 1 ; gene_id "PBX1--LINC00824^LINC00824^ENSG00000254275.6" ; gene_name LINC00824 ; gene_type lncRNA ; havana_gene "OTTHUMG00000165050.1" ; havana_transcript "OTTHUMT00000381573.1" ; hgnc_id "HGNC:50281" ; level 2 ; orig_coord_info "chr8,128415366,128415381,-" ; tag dotter_confirmed basic ; transcript_id "PBX1--LINC00824^ENST00000517583.1" ; transcript_name "LINC00824-201" ; transcript_support_level 5 ; transcript_type lncRNA
L1 and L2 created:
PBX1--SLC7A11-AS1 HAVANA gene 49371 54480 . + . FI_gene_label "SLC7A11-AS1^ENSG00000250033.5" ; ID "PBX1--SLC7A11-AS1^SLC7A11-AS1^ENSG00000250033.5" ; exon_id "ENSE00002079767.1" ; exon_number 1 ; gene_id "PBX1--SLC7A11-AS1^SLC7A11-AS1^ENSG00000250033.5" ; gene_name "SLC7A11-AS1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000161284.2" ; havana_transcript "OTTHUMT00000364383.1" ; hgnc_id "HGNC:44064" ; level 2 ; orig_coord_info "chr4,138057464,138057508,+" ; tag basic ; transcript_id "PBX1--SLC7A11-AS1^ENST00000510066.5" ; transcript_name "SLC7A11-AS1-201" ; transcript_support_level 2 ; transcript_type lncRNA
PBX1--SLC7A11-AS1 HAVANA RNA 49371 54480 . + . FI_gene_label "SLC7A11-AS1^ENSG00000250033.5" ; ID "PBX1--SLC7A11-AS1^ENST00000510066.5" ; Parent "PBX1--SLC7A11-AS1^SLC7A11-AS1^ENSG00000250033.5" ; exon_id "ENSE00002079767.1" ; exon_number 1 ; gene_id "PBX1--SLC7A11-AS1^SLC7A11-AS1^ENSG00000250033.5" ; gene_name "SLC7A11-AS1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000161284.2" ; havana_transcript "OTTHUMT00000364383.1" ; hgnc_id "HGNC:44064" ; level 2 ; orig_coord_info "chr4,138057464,138057508,+" ; tag basic ; transcript_id "PBX1--SLC7A11-AS1^ENST00000510066.5" ; transcript_name "SLC7A11-AS1-201" ; transcript_support_level 2 ; transcript_type lncRNA
L1 and L2 created:
PLAA--AL353753.1 HAVANA gene 20923 28845 . + . FI_gene_label "AL353753.1^ENSG00000276759.2" ; ID "PLAA--AL353753.1^AL353753.1^ENSG00000276759.2" ; exon_id "ENSE00003757446.1" ; exon_number 1 ; gene_id "PLAA--AL353753.1^AL353753.1^ENSG00000276759.2" ; gene_name "AL353753.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000189251.2" ; havana_transcript "OTTHUMT00000479171.1" ; level 2 ; orig_coord_info "chr9,26066675,26066826,+" ; tag basic ; transcript_id "PLAA--AL353753.1^ENST00000612217.2" ; transcript_name "AL353753.1-201" ; transcript_support_level 2 ; transcript_type lncRNA
PLAA--AL353753.1 HAVANA RNA 20923 28845 . + . FI_gene_label "AL353753.1^ENSG00000276759.2" ; ID "PLAA--AL353753.1^ENST00000612217.2" ; Parent "PLAA--AL353753.1^AL353753.1^ENSG00000276759.2" ; exon_id "ENSE00003757446.1" ; exon_number 1 ; gene_id "PLAA--AL353753.1^AL353753.1^ENSG00000276759.2" ; gene_name "AL353753.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000189251.2" ; havana_transcript "OTTHUMT00000479171.1" ; level 2 ; orig_coord_info "chr9,26066675,26066826,+" ; tag basic ; transcript_id "PLAA--AL353753.1^ENST00000612217.2" ; transcript_name "AL353753.1-201" ; transcript_support_level 2 ; transcript_type lncRNA
L1 and L2 created:
PLAA--FAM71BP1 HAVANA gene 20923 21445 . + . FI_gene_label "FAM71BP1^ENSG00000270683.1" ; ID "PLAA--FAM71BP1^FAM71BP1^ENSG00000270683.1" ; exon_id "ENSE00003480497.1" ; exon_number 1 ; gene_id "PLAA--FAM71BP1^FAM71BP1^ENSG00000270683.1" ; gene_name FAM71BP1 ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000184661.1" ; havana_transcript "OTTHUMT00000469041.1" ; hgnc_id "HGNC:49805" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr9,25937912,25938434,+" ; tag pseudo_consens basic ; transcript_id "PLAA--FAM71BP1^ENST00000604431.1" ; transcript_name "FAM71BP1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
PLAA--FAM71BP1 HAVANA RNA 20923 21445 . + . FI_gene_label "FAM71BP1^ENSG00000270683.1" ; ID "PLAA--FAM71BP1^ENST00000604431.1" ; Parent "PLAA--FAM71BP1^FAM71BP1^ENSG00000270683.1" ; exon_id "ENSE00003480497.1" ; exon_number 1 ; gene_id "PLAA--FAM71BP1^FAM71BP1^ENSG00000270683.1" ; gene_name FAM71BP1 ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000184661.1" ; havana_transcript "OTTHUMT00000469041.1" ; hgnc_id "HGNC:49805" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr9,25937912,25938434,+" ; tag pseudo_consens basic ; transcript_id "PLAA--FAM71BP1^ENST00000604431.1" ; transcript_name "FAM71BP1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
L1 and L2 created:
PLEKHM1P1--MAP3K3 HAVANA gene 1030 7034 . + . FI_gene_label "PLEKHM1P1^ENSG00000214176.9" ; ID "PLEKHM1P1--MAP3K3^PLEKHM1P1^ENSG00000214176.9" ; exon_id "ENSE00002208800.1" ; exon_number 1 ; gene_id "PLEKHM1P1--MAP3K3^PLEKHM1P1^ENSG00000214176.9" ; gene_name PLEKHM1P1 ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000179296.2" ; havana_transcript "OTTHUMT00000445601.1" ; hgnc_id "HGNC:35411" ; level 2 ; orig_coord_info "chr17,64837056,64837125,-" ; transcript_id "PLEKHM1P1--MAP3K3^ENST00000397718.8" ; transcript_name "PLEKHM1P1-201" ; transcript_support_level 2 ; transcript_type processed_transcript
PLEKHM1P1--MAP3K3 HAVANA RNA 1030 7034 . + . FI_gene_label "PLEKHM1P1^ENSG00000214176.9" ; ID "PLEKHM1P1--MAP3K3^ENST00000397718.8" ; Parent "PLEKHM1P1--MAP3K3^PLEKHM1P1^ENSG00000214176.9" ; exon_id "ENSE00002208800.1" ; exon_number 1 ; gene_id "PLEKHM1P1--MAP3K3^PLEKHM1P1^ENSG00000214176.9" ; gene_name PLEKHM1P1 ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000179296.2" ; havana_transcript "OTTHUMT00000445601.1" ; hgnc_id "HGNC:35411" ; level 2 ; orig_coord_info "chr17,64837056,64837125,-" ; transcript_id "PLEKHM1P1--MAP3K3^ENST00000397718.8" ; transcript_name "PLEKHM1P1-201" ; transcript_support_level 2 ; transcript_type processed_transcript
L1 and L2 created:
PLEKHM1P1--SP2 HAVANA gene 1030 7034 . + . FI_gene_label "PLEKHM1P1^ENSG00000214176.9" ; ID "PLEKHM1P1--SP2^PLEKHM1P1^ENSG00000214176.9" ; exon_id "ENSE00002208800.1" ; exon_number 1 ; gene_id "PLEKHM1P1--SP2^PLEKHM1P1^ENSG00000214176.9" ; gene_name PLEKHM1P1 ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000179296.2" ; havana_transcript "OTTHUMT00000445601.1" ; hgnc_id "HGNC:35411" ; level 2 ; orig_coord_info "chr17,64837056,64837125,-" ; transcript_id "PLEKHM1P1--SP2^ENST00000397718.8" ; transcript_name "PLEKHM1P1-201" ; transcript_support_level 2 ; transcript_type processed_transcript
PLEKHM1P1--SP2 HAVANA RNA 1030 7034 . + . FI_gene_label "PLEKHM1P1^ENSG00000214176.9" ; ID "PLEKHM1P1--SP2^ENST00000397718.8" ; Parent "PLEKHM1P1--SP2^PLEKHM1P1^ENSG00000214176.9" ; exon_id "ENSE00002208800.1" ; exon_number 1 ; gene_id "PLEKHM1P1--SP2^PLEKHM1P1^ENSG00000214176.9" ; gene_name PLEKHM1P1 ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000179296.2" ; havana_transcript "OTTHUMT00000445601.1" ; hgnc_id "HGNC:35411" ; level 2 ; orig_coord_info "chr17,64837056,64837125,-" ; transcript_id "PLEKHM1P1--SP2^ENST00000397718.8" ; transcript_name "PLEKHM1P1-201" ; transcript_support_level 2 ; transcript_type processed_transcript
L1 and L2 created:
POU2F1--PCAT1 HAVANA gene 47818 51460 . + . FI_gene_label "PCAT1^ENSG00000253438.4" ; ID "POU2F1--PCAT1^PCAT1^ENSG00000253438.4" ; exon_id "ENSE00002094284.1" ; exon_number 1 ; gene_id "POU2F1--PCAT1^PCAT1^ENSG00000253438.4" ; gene_name PCAT1 ; gene_type lncRNA ; havana_gene "OTTHUMG00000165067.7" ; havana_transcript "OTTHUMT00000381546.1" ; hgnc_id "HGNC:43022" ; level 2 ; orig_coord_info "chr8,126557886,126557931,+" ; transcript_id "POU2F1--PCAT1^ENST00000517773.5" ; transcript_name "PCAT1-201" ; transcript_support_level 3 ; transcript_type lncRNA
POU2F1--PCAT1 HAVANA RNA 47818 51460 . + . FI_gene_label "PCAT1^ENSG00000253438.4" ; ID "POU2F1--PCAT1^ENST00000517773.5" ; Parent "POU2F1--PCAT1^PCAT1^ENSG00000253438.4" ; exon_id "ENSE00002094284.1" ; exon_number 1 ; gene_id "POU2F1--PCAT1^PCAT1^ENSG00000253438.4" ; gene_name PCAT1 ; gene_type lncRNA ; havana_gene "OTTHUMG00000165067.7" ; havana_transcript "OTTHUMT00000381546.1" ; hgnc_id "HGNC:43022" ; level 2 ; orig_coord_info "chr8,126557886,126557931,+" ; transcript_id "POU2F1--PCAT1^ENST00000517773.5" ; transcript_name "PCAT1-201" ; transcript_support_level 3 ; transcript_type lncRNA
L1 and L2 created:
SCARF2--SMPD4P1 HAVANA gene 16452 29424 . + . FI_gene_label "SMPD4P1^ENSG00000223553.6" ; ID "SCARF2--SMPD4P1^SMPD4P1^ENSG00000223553.6" ; exon_id "ENSE00001676552.1" ; exon_number 1 ; gene_id "SCARF2--SMPD4P1^SMPD4P1^ENSG00000223553.6" ; gene_name SMPD4P1 ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000030245.6" ; havana_transcript "OTTHUMT00000075099.6" ; hgnc_id "HGNC:39673" ; level 1 ; ont "PGO:0000005" "PGO:0000019" ; orig_coord_info "chr22,20626096,20626134,-" ; tag pseudo_consens basic ; transcript_id "SCARF2--SMPD4P1^ENST00000416717.6" ; transcript_name "SMPD4P1-201" ; transcript_support_level NA ; transcript_type transcribed_unprocessed_pseudogene
SCARF2--SMPD4P1 HAVANA RNA 16452 29424 . + . FI_gene_label "SMPD4P1^ENSG00000223553.6" ; ID "SCARF2--SMPD4P1^ENST00000416717.6" ; Parent "SCARF2--SMPD4P1^SMPD4P1^ENSG00000223553.6" ; exon_id "ENSE00001676552.1" ; exon_number 1 ; gene_id "SCARF2--SMPD4P1^SMPD4P1^ENSG00000223553.6" ; gene_name SMPD4P1 ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000030245.6" ; havana_transcript "OTTHUMT00000075099.6" ; hgnc_id "HGNC:39673" ; level 1 ; ont "PGO:0000005" "PGO:0000019" ; orig_coord_info "chr22,20626096,20626134,-" ; tag pseudo_consens basic ; transcript_id "SCARF2--SMPD4P1^ENST00000416717.6" ; transcript_name "SMPD4P1-201" ; transcript_support_level NA ; transcript_type transcribed_unprocessed_pseudogene
L1 and L2 created:
SLC5A4P1--OR8A1 HAVANA gene 1001 1612 . + . FI_gene_label "SLC5A4P1^ENSG00000255116.2" ; ID "SLC5A4P1--OR8A1^SLC5A4P1^ENSG00000255116.2" ; exon_id "ENSE00002146264.2" ; exon_number 1 ; gene_id "SLC5A4P1--OR8A1^SLC5A4P1^ENSG00000255116.2" ; gene_name SLC5A4P1 ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000165976.2" ; havana_transcript "OTTHUMT00000387284.2" ; hgnc_id "HGNC:45041" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr11,124273970,124274581,+" ; tag pseudo_consens basic ; transcript_id "SLC5A4P1--OR8A1^ENST00000532944.2" ; transcript_name "SLC5A4P1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
SLC5A4P1--OR8A1 HAVANA RNA 1001 1612 . + . FI_gene_label "SLC5A4P1^ENSG00000255116.2" ; ID "SLC5A4P1--OR8A1^ENST00000532944.2" ; Parent "SLC5A4P1--OR8A1^SLC5A4P1^ENSG00000255116.2" ; exon_id "ENSE00002146264.2" ; exon_number 1 ; gene_id "SLC5A4P1--OR8A1^SLC5A4P1^ENSG00000255116.2" ; gene_name SLC5A4P1 ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000165976.2" ; havana_transcript "OTTHUMT00000387284.2" ; hgnc_id "HGNC:45041" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr11,124273970,124274581,+" ; tag pseudo_consens basic ; transcript_id "SLC5A4P1--OR8A1^ENST00000532944.2" ; transcript_name "SLC5A4P1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
L1 and L2 created:
TANC2--AC018521.4 HAVANA gene 50636 52166 . + . FI_gene_label "AC018521.4^ENSG00000264701.1" ; ID "TANC2--AC018521.4^AC018521.4^ENSG00000264701.1" ; exon_id "ENSE00002730349.1" ; exon_number 1 ; gene_id "TANC2--AC018521.4^AC018521.4^ENSG00000264701.1" ; gene_name "AC018521.4" ; gene_type lncRNA ; havana_gene "OTTHUMG00000178683.1" ; havana_transcript "OTTHUMT00000442947.1" ; level 2 ; orig_coord_info "chr17,47995951,47996196,-" ; tag basic ; transcript_id "TANC2--AC018521.4^ENST00000578239.1" ; transcript_name "AC018521.4-201" ; transcript_support_level 4 ; transcript_type lncRNA
TANC2--AC018521.4 HAVANA RNA 50636 52166 . + . FI_gene_label "AC018521.4^ENSG00000264701.1" ; ID "TANC2--AC018521.4^ENST00000578239.1" ; Parent "TANC2--AC018521.4^AC018521.4^ENSG00000264701.1" ; exon_id "ENSE00002730349.1" ; exon_number 1 ; gene_id "TANC2--AC018521.4^AC018521.4^ENSG00000264701.1" ; gene_name "AC018521.4" ; gene_type lncRNA ; havana_gene "OTTHUMG00000178683.1" ; havana_transcript "OTTHUMT00000442947.1" ; level 2 ; orig_coord_info "chr17,47995951,47996196,-" ; tag basic ; transcript_id "TANC2--AC018521.4^ENST00000578239.1" ; transcript_name "AC018521.4-201" ; transcript_support_level 4 ; transcript_type lncRNA
L1 and L2 created:
TANC2--AC091180.4 HAVANA gene 50636 51880 . + . FI_gene_label "AC091180.4^ENSG00000250948.1" ; ID "TANC2--AC091180.4^AC091180.4^ENSG00000250948.1" ; exon_id "ENSE00002080843.1" ; exon_number 1 ; gene_id "TANC2--AC091180.4^AC091180.4^ENSG00000250948.1" ; gene_name "AC091180.4" ; gene_type lncRNA ; havana_gene "OTTHUMG00000161364.1" ; havana_transcript "OTTHUMT00000364658.1" ; level 1 ; orig_coord_info "chr17,49375380,49375509,+" ; tag basic exp_conf ; transcript_id "TANC2--AC091180.4^ENST00000511322.1" ; transcript_name "AC091180.4-201" ; transcript_support_level 2 ; transcript_type lncRNA
TANC2--AC091180.4 HAVANA RNA 50636 51880 . + . FI_gene_label "AC091180.4^ENSG00000250948.1" ; ID "TANC2--AC091180.4^ENST00000511322.1" ; Parent "TANC2--AC091180.4^AC091180.4^ENSG00000250948.1" ; exon_id "ENSE00002080843.1" ; exon_number 1 ; gene_id "TANC2--AC091180.4^AC091180.4^ENSG00000250948.1" ; gene_name "AC091180.4" ; gene_type lncRNA ; havana_gene "OTTHUMG00000161364.1" ; havana_transcript "OTTHUMT00000364658.1" ; level 1 ; orig_coord_info "chr17,49375380,49375509,+" ; tag basic exp_conf ; transcript_id "TANC2--AC091180.4^ENST00000511322.1" ; transcript_name "AC091180.4-201" ; transcript_support_level 2 ; transcript_type lncRNA
L1 and L2 created:
TANC2--AC091180.5 HAVANA gene 50636 53017 . + . FI_gene_label "AC091180.5^ENSG00000262039.1" ; ID "TANC2--AC091180.5^AC091180.5^ENSG00000262039.1" ; exon_id "ENSE00002671781.1" ; exon_number 1 ; gene_id "TANC2--AC091180.5^AC091180.5^ENSG00000262039.1" ; gene_name "AC091180.5" ; gene_type lncRNA ; havana_gene "OTTHUMG00000177919.1" ; havana_transcript "OTTHUMT00000439714.1" ; level 1 ; orig_coord_info "chr17,49370740,49370935,+" ; tag dotter_confirmed basic exp_conf ; transcript_id "TANC2--AC091180.5^ENST00000576461.1" ; transcript_name "AC091180.5-201" ; transcript_support_level 5 ; transcript_type lncRNA
TANC2--AC091180.5 HAVANA RNA 50636 53017 . + . FI_gene_label "AC091180.5^ENSG00000262039.1" ; ID "TANC2--AC091180.5^ENST00000576461.1" ; Parent "TANC2--AC091180.5^AC091180.5^ENSG00000262039.1" ; exon_id "ENSE00002671781.1" ; exon_number 1 ; gene_id "TANC2--AC091180.5^AC091180.5^ENSG00000262039.1" ; gene_name "AC091180.5" ; gene_type lncRNA ; havana_gene "OTTHUMG00000177919.1" ; havana_transcript "OTTHUMT00000439714.1" ; level 1 ; orig_coord_info "chr17,49370740,49370935,+" ; tag dotter_confirmed basic exp_conf ; transcript_id "TANC2--AC091180.5^ENST00000576461.1" ; transcript_name "AC091180.5-201" ; transcript_support_level 5 ; transcript_type lncRNA
L1 and L2 created:
TLK2--FAM157A HAVANA gene 40046 44186 . + . FI_gene_label "FAM157A^ENSG00000236438.7" ; ID "TLK2--FAM157A^FAM157A^ENSG00000236438.7" ; exon_id "ENSE00002579345.3" ; exon_number 1 ; gene_id "TLK2--FAM157A^FAM157A^ENSG00000236438.7" ; gene_name FAM157A ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000187506.3" ; havana_transcript "OTTHUMT00000488453.1" ; hgnc_id "HGNC:34079" ; level 2 ; orig_coord_info "chr3,198153287,198153409,+" ; tag basic ; transcript_id "TLK2--FAM157A^ENST00000437428.3" ; transcript_name "FAM157A-201" ; transcript_support_level 3 ; transcript_type processed_transcript
TLK2--FAM157A HAVANA RNA 40046 44186 . + . FI_gene_label "FAM157A^ENSG00000236438.7" ; ID "TLK2--FAM157A^ENST00000437428.3" ; Parent "TLK2--FAM157A^FAM157A^ENSG00000236438.7" ; exon_id "ENSE00002579345.3" ; exon_number 1 ; gene_id "TLK2--FAM157A^FAM157A^ENSG00000236438.7" ; gene_name FAM157A ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000187506.3" ; havana_transcript "OTTHUMT00000488453.1" ; hgnc_id "HGNC:34079" ; level 2 ; orig_coord_info "chr3,198153287,198153409,+" ; tag basic ; transcript_id "TLK2--FAM157A^ENST00000437428.3" ; transcript_name "FAM157A-201" ; transcript_support_level 3 ; transcript_type processed_transcript
L1 and L2 created:
TLK2P1--AC110079.1 HAVANA gene 1001 4192 . + . FI_gene_label "TLK2P1^ENSG00000226049.3" ; ID "TLK2P1--AC110079.1^TLK2P1^ENSG00000226049.3" ; exon_id "ENSE00002174619.1" ; exon_number 1 ; gene_id "TLK2P1--AC110079.1^TLK2P1^ENSG00000226049.3" ; gene_name TLK2P1 ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000166422.1" ; havana_transcript "OTTHUMT00000389700.1" ; hgnc_id "HGNC:18048" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr17,34036681,34039872,-" ; tag pseudo_consens basic ; transcript_id "TLK2P1--AC110079.1^ENST00000530992.1" ; transcript_name "TLK2P1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
TLK2P1--AC110079.1 HAVANA RNA 1001 4192 . + . FI_gene_label "TLK2P1^ENSG00000226049.3" ; ID "TLK2P1--AC110079.1^ENST00000530992.1" ; Parent "TLK2P1--AC110079.1^TLK2P1^ENSG00000226049.3" ; exon_id "ENSE00002174619.1" ; exon_number 1 ; gene_id "TLK2P1--AC110079.1^TLK2P1^ENSG00000226049.3" ; gene_name TLK2P1 ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000166422.1" ; havana_transcript "OTTHUMT00000389700.1" ; hgnc_id "HGNC:18048" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr17,34036681,34039872,-" ; tag pseudo_consens basic ; transcript_id "TLK2P1--AC110079.1^ENST00000530992.1" ; transcript_name "TLK2P1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
L1 and L2 created:
TLK2P1--AC110079.1 HAVANA gene 7193 19707 . + . FI_gene_label "AC110079.1^ENSG00000260404.3" ; ID "TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3" ; exon_id "ENSE00002625896.1" ; exon_number 1 ; gene_id "TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3" ; gene_name "AC110079.1" ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000161164.4" ; havana_transcript "OTTHUMT00000364170.2" ; level 2 ; orig_coord_info "chr4,118591773,118591895,+" ; tag dotter_confirmed basic ; transcript_id "TLK2P1--AC110079.1^ENST00000567913.2" ; transcript_name "AC110079.1-201" ; transcript_support_level 5 ; transcript_type processed_transcript
TLK2P1--AC110079.1 HAVANA RNA 7193 19707 . + . FI_gene_label "AC110079.1^ENSG00000260404.3" ; ID "TLK2P1--AC110079.1^ENST00000567913.2" ; Parent "TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3" ; exon_id "ENSE00002625896.1" ; exon_number 1 ; gene_id "TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3" ; gene_name "AC110079.1" ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000161164.4" ; havana_transcript "OTTHUMT00000364170.2" ; level 2 ; orig_coord_info "chr4,118591773,118591895,+" ; tag dotter_confirmed basic ; transcript_id "TLK2P1--AC110079.1^ENST00000567913.2" ; transcript_name "AC110079.1-201" ; transcript_support_level 5 ; transcript_type processed_transcript
L1 and L2 created:
TSPAN14--SH3PXD2A-AS1 HAVANA gene 34717 37782 . + . FI_gene_label "SH3PXD2A-AS1^ENSG00000280693.2" ; ID "TSPAN14--SH3PXD2A-AS1^SH3PXD2A-AS1^ENSG00000280693.2" ; exon_id "ENSE00003761487.1" ; exon_number 1 ; gene_id "TSPAN14--SH3PXD2A-AS1^SH3PXD2A-AS1^ENSG00000280693.2" ; gene_name "SH3PXD2A-AS1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000189516.1" ; havana_transcript "OTTHUMT00000479846.1" ; hgnc_id "HGNC:45242" ; level 2 ; orig_coord_info "chr10,103746793,103747096,+" ; transcript_id "TSPAN14--SH3PXD2A-AS1^ENST00000625265.1" ; transcript_name "SH3PXD2A-AS1-201" ; transcript_support_level 2 ; transcript_type lncRNA
TSPAN14--SH3PXD2A-AS1 HAVANA RNA 34717 37782 . + . FI_gene_label "SH3PXD2A-AS1^ENSG00000280693.2" ; ID "TSPAN14--SH3PXD2A-AS1^ENST00000625265.1" ; Parent "TSPAN14--SH3PXD2A-AS1^SH3PXD2A-AS1^ENSG00000280693.2" ; exon_id "ENSE00003761487.1" ; exon_number 1 ; gene_id "TSPAN14--SH3PXD2A-AS1^SH3PXD2A-AS1^ENSG00000280693.2" ; gene_name "SH3PXD2A-AS1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000189516.1" ; havana_transcript "OTTHUMT00000479846.1" ; hgnc_id "HGNC:45242" ; level 2 ; orig_coord_info "chr10,103746793,103747096,+" ; transcript_id "TSPAN14--SH3PXD2A-AS1^ENST00000625265.1" ; transcript_name "SH3PXD2A-AS1-201" ; transcript_support_level 2 ; transcript_type lncRNA
L1 and L2 created:
VMP1--AC005884.1 HAVANA gene 23166 25594 . + . FI_gene_label "AC005884.1^ENSG00000267207.1" ; ID "VMP1--AC005884.1^AC005884.1^ENSG00000267207.1" ; exon_id "ENSE00002794503.1" ; exon_number 1 ; gene_id "VMP1--AC005884.1^AC005884.1^ENSG00000267207.1" ; gene_name "AC005884.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000180067.1" ; havana_transcript "OTTHUMT00000449605.1" ; level 2 ; orig_coord_info "chr17,61070005,61070122,-" ; tag basic ; transcript_id "VMP1--AC005884.1^ENST00000588604.1" ; transcript_name "AC005884.1-201" ; transcript_support_level 5 ; transcript_type lncRNA
VMP1--AC005884.1 HAVANA RNA 23166 25594 . + . FI_gene_label "AC005884.1^ENSG00000267207.1" ; ID "VMP1--AC005884.1^ENST00000588604.1" ; Parent "VMP1--AC005884.1^AC005884.1^ENSG00000267207.1" ; exon_id "ENSE00002794503.1" ; exon_number 1 ; gene_id "VMP1--AC005884.1^AC005884.1^ENSG00000267207.1" ; gene_name "AC005884.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000180067.1" ; havana_transcript "OTTHUMT00000449605.1" ; level 2 ; orig_coord_info "chr17,61070005,61070122,-" ; tag basic ; transcript_id "VMP1--AC005884.1^ENST00000588604.1" ; transcript_name "AC005884.1-201" ; transcript_support_level 5 ; transcript_type lncRNA
2883 cases fixed where L3 features have parent feature(s) missing
------------------------------ done in 1 seconds -------------------------------
--------------------------- Check5: l1 linked to l2 ----------------------------
No problem found
------------------------------ done in 0 seconds -------------------------------
--------------------------- Check6: remove orphan l1 ---------------------------
We remove only those not supposed to be orphan
None found
------------------------------ done in 0 seconds -------------------------------
------------------------- Check7: all level3 locations -------------------------
------------------------------ done in 0 seconds -------------------------------
------------------------------ Check8: check cds -------------------------------
No problem found
------------------------------ done in 0 seconds -------------------------------
----------------------------- Check9: check exons ------------------------------
No exons created
No exons locations modified
No supernumerary exons removed
No level2 locations modified
------------------------------ done in 1 seconds -------------------------------
----------------------------- Check10: check utrs ------------------------------
4733 UTRs created that were missing
No UTRs locations modified
No supernumerary UTRs removed
------------------------------ done in 0 seconds -------------------------------
------------------------ Check11: all level2 locations -------------------------
No problem found
------------------------------ done in 0 seconds -------------------------------
------------------------ Check12: all level1 locations -------------------------
We fixed 202 wrong level1 location cases
------------------------------ done in 0 seconds -------------------------------
---------------------- Check13: remove identical isoforms ----------------------
None found
------------------------------ done in 1 seconds -------------------------------
------ End checks (done in 3 second) ------
GFF3 file parsed