File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7b/5cb92b15b497948be69c58a5c2a915/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ba/f21c773b2fe80606ef8c159a918f45/aih-tih-sc-2a8dd7-R1_A23WJ53LT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7b/5cb92b15b497948be69c58a5c2a915/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7b/5cb92b15b497948be69c58a5c2a915/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/63/4d63f60a5f09aa88939acc9d50694f/aih-tih-sc-2a8dd7-R1_A23WJ53LT4_1
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-2a8dd7-R1_A23WJ53LT4_1/abundance.h5
Successfully converted aih-tih-sc-2a8dd7-R1_A23WJ53LT4_1/abundance.h5 to aih-tih-sc-2a8dd7-R1_A23WJ53LT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-2a8dd7-R1_A23WJ53LT4_1
  Mean Fragment Length: 137.0 bp
  Median Fragment Length: 126.0 bp
  pct_mito_est_counts: 0.006%
  pct_ribo_est_counts: 1.151%
  pct_hk_est_counts: 0.468%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.013%
  pct_ribo_tpm: 3.491%
  pct_hk_tpm: 0.693%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.004%