Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/fadb7d9f9f7a1a2279e4b732a6186f/aih-tih-sc-284856-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/e7ef2d7b7cd2063be8c26f44d487c6/aih-tih-sc-284856-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/3fd8f6172749d0cc7e6684b421b2c2/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/3fd8f6172749d0cc7e6684b421b2c2/.command.run
==> STAGING COMPLETE (4 inputs)

[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-284856-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam.bai
Load BAM file ...  Done
report duplicte rate based on sequence ...
report duplicte rate based on mapping  ...
generate R script ...
null device 
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