Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fd/44d478988b781361bbb43743242093/aih-tih-sc-331e97-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/0352010e5727c976f7d16ce88a08da/ref_annot.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/1429bf5fed3f12b785025a578fe891/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/1429bf5fed3f12b785025a578fe891/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/51/43d0eeeb57f6e794c1328833b6aa50/aih-tih-sc-331e97-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam
==> STAGING COMPLETE (5 inputs)

null device 
          1 
null device 
          1 
total = 288389
[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-331e97-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	288389
Known Splicing Events:	284357
Partial Novel Splicing Events:	2137
Novel Splicing Events:	1607
Filtered Splicing Events:	288

Total splicing  Junctions:	22212
Known Splicing Junctions:	21781
Partial Novel Splicing Junctions:	246
Novel Splicing Junctions:	185

===================================================================
Create BED file ...
Create Interact file ...