AIH curated blacklist: matched 13 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 191
Pass (FILTER=PASS): 58 (30.4%)
Fail (FILTER=FAIL): 133 (69.6%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 13
All 13 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 47
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 18
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(low<high): 5
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0);aih_curated_blacklist: 2
confidence_below_min(low<high);aih_curated_blacklist: 2
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 2
Breakdown by confidence:
high: 58 pass, 1 fail (total: 59)
low: 0 pass, 61 fail (total: 61)
medium: 0 pass, 71 fail (total: 71)
Arriba filter: 191 rows -> 58 PASS; wrote aih-tih-sc-5d3207-R1_A23WJ53LT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-5d3207-R1_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-5d3207-R1_A23WJ53LT4_1.arriba.fusions.filter_summary.txt