AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 381
Pass (FILTER=PASS): 45 (11.8%)
Fail (FILTER=FAIL): 336 (88.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 89
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 53
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 37
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 19
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 18
confidence_below_min(low<high): 18
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 6
total_reads_below_min(3.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
Breakdown by confidence:
high: 45 pass, 15 fail (total: 60)
low: 0 pass, 151 fail (total: 151)
medium: 0 pass, 170 fail (total: 170)
Arriba filter: 381 rows -> 45 PASS; wrote aih-tih-sc-3e4d53-R1_A23WJ53LT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-3e4d53-R1_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-3e4d53-R1_A23WJ53LT4_1.arriba.fusions.filter_summary.txt