Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/ce67f3e179c3f0de64656c52c0ce83/aih-tih-sc-9f6030-R1_A23WJ53LT4_1.Chimeric.out.junction
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/71/b59445758050f474581fc60429bad8/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6b/6ed4efcc46d4582647023f02415785/aih-tih-sc-9f6030-R1_A23WJ53LT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6b/6ed4efcc46d4582647023f02415785/aih-tih-sc-9f6030-R1_A23WJ53LT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/71/b59445758050f474581fc60429bad8/.command.run
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.sWlV38Bo0A/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary
-sample contains 262696538 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir  -J /tmp/nxf.sWlV38Bo0A/aih-tih-sc-9f6030-R1_A23WJ53LT4_1.Chimeric.out.junction  -O /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.sWlV38Bo0A/aih-tih-sc-9f6030-R1_A23WJ53LT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2380000], rate=69556.75/min -building interval tree based on /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[2350000], rate=57692.31/min -building interval tree based on /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[2340000], rate=43697.48/min 
[2350000], rate=43788.82/min -building interval tree based on /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=150000.00/min 
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[2350000], rate=42367.79/min 
[2360000], rate=42471.51/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 9000000.00 reads per min processed...  
 8000000.00 reads per min processed...  
 10000000.00 reads per min processed...  
 9000000.00 reads per min processed...  
 10500000.00 reads per min processed...  
 8000000.00 reads per min processed...  
 7714285.71 reads per min processed...  
 6666666.67 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 5600000.00 reads per min processed...  
 5294117.65 reads per min processed...  
 5333333.33 reads per min processed...  
 5100000.00 reads per min processed...  
 5142857.14 reads per min processed...  
 4956521.74 reads per min processed...  
 5000000.00 reads per min processed...  
 4846153.85 reads per min processed...  
 4888888.89 reads per min processed...  
 4758620.69 reads per min processed...  
 4645161.29 reads per min processed...  
 4687500.00 reads per min processed...  
 4588235.29 reads per min processed...  
 4628571.43 reads per min processed...  
 4540540.54 reads per min processed...  
 4461538.46 reads per min processed...  
 4390243.90 reads per min processed...  
 4428571.43 reads per min processed...  
 4363636.36 reads per min processed...  
 4304347.83 reads per min processed...  
 4340425.53 reads per min processed...  
 4285714.29 reads per min processed...  
 4320000.00 reads per min processed...  
 4352941.18 reads per min processed...  
 4301886.79 reads per min processed...  
 4333333.33 reads per min processed...  
 4363636.36 reads per min processed...  
 4315789.47 reads per min processed...  
 4344827.59 reads per min processed...  
 4300000.00 reads per min processed...  
 4327868.85 reads per min processed...  
 4285714.29 reads per min processed...  
 4312500.00 reads per min processed...  
 4338461.54 reads per min processed...  
 4363636.36 reads per min processed...  
 4454545.45 reads per min processed...  
 4477611.94 reads per min processed...  
 4567164.18 reads per min processed...  
 4588235.29 reads per min processed...  
 4608695.65 reads per min processed...  
 4695652.17 reads per min processed...  
 4714285.71 reads per min processed...  
 4800000.00 reads per min processed...  
 4816901.41 reads per min processed...  
 4767123.29 reads per min processed...  
 4783783.78 reads per min processed...  
 4800000.00 reads per min processed...  
 4753246.75 reads per min processed...  
 4769230.77 reads per min processed...  
 4725000.00 reads per min processed...  
 4740740.74 reads per min processed...  
 4756097.56 reads per min processed...  
 4714285.71 reads per min processed...  
 4729411.76 reads per min processed...  
 4689655.17 reads per min processed...  
 4651685.39 reads per min processed...  
 4666666.67 reads per min processed...  
 4681318.68 reads per min processed...  
 4645161.29 reads per min processed...  
 4659574.47 reads per min processed...  
 4625000.00 reads per min processed...  
 4639175.26 reads per min processed...  
 4653061.22 reads per min processed...  
 4620000.00 reads per min processed...  
 4633663.37 reads per min processed...  
 4647058.82 reads per min processed...  
 4660194.17 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.sWlV38Bo0A/aih-tih-sc-9f6030-R1_A23WJ53LT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -236015.428674
EM: Round [1] log likelihood: -235847.234763
EM: Round [2] log likelihood: -235782.548439
EM: Round [3] log likelihood: -235751.472603
EM: Round [4] log likelihood: -235734.973985
EM: Round [5] log likelihood: -235725.723764
EM: Round [6] log likelihood: -235720.303469
EM: Round [7] log likelihood: -235716.982343
EM: Round [8] log likelihood: -235714.852635
EM: Round [9] log likelihood: -235713.425285
EM: Round [10] log likelihood: -235712.428804
EM: Round [11] log likelihood: -235711.707303
EM: Round [12] log likelihood: -235711.168011
EM: Round [13] log likelihood: -235710.753701
EM: Round [14] log likelihood: -235710.427823
EM: Round [15] log likelihood: -235710.166265
EM: Round [16] log likelihood: -235709.952640
EM: Round [17] log likelihood: -235709.775509
EM: Round [18] log likelihood: -235709.626696
EM: Round [19] log likelihood: -235709.500229
EM: Round [20] log likelihood: -235709.391663
EM: Round [21] log likelihood: -235709.297633
EM: Round [22] log likelihood: -235709.215549
EM: Round [23] log likelihood: -235709.143392
EM: Round [24] log likelihood: -235709.079565
EM: Round [25] log likelihood: -235709.022792
EM: Round [26] log likelihood: -235708.972038
EM: Round [27] log likelihood: -235708.926459
EM: Round [28] log likelihood: -235708.885360
EM: Round [29] log likelihood: -235708.848160
EM: Round [30] log likelihood: -235708.814374
EM: Round [31] log likelihood: -235708.783592
EM: Round [32] log likelihood: -235708.755465
EM: Round [33] log likelihood: -235708.729693
EM: Round [34] log likelihood: -235708.706022
EM: Round [35] log likelihood: -235708.684228
EM: Round [36] log likelihood: -235708.664120
EM: Round [37] log likelihood: -235708.645529
EM: Round [38] log likelihood: -235708.628308
EM: Round [39] log likelihood: -235708.612328
EM: Round [40] log likelihood: -235708.597474
EM: Round [41] log likelihood: -235708.583645
EM: Round [42] log likelihood: -235708.570752
EM: Round [43] log likelihood: -235708.558715
EM: Round [44] log likelihood: -235708.547461
EM: Round [45] log likelihood: -235708.536928
EM: Round [46] log likelihood: -235708.527057
EM: Round [47] log likelihood: -235708.517797
EM: Round [48] log likelihood: -235708.509100
EM: Round [49] log likelihood: -235708.500926
EM: Round [50] log likelihood: -235708.493234
EM: Round [51] log likelihood: -235708.485992
EM: Round [52] log likelihood: -235708.479165
EM: Round [53] log likelihood: -235708.472727
EM: Round [54] log likelihood: -235708.466650
EM: Round [55] log likelihood: -235708.460910
EM: Round [56] log likelihood: -235708.455485
EM: Round [57] log likelihood: -235708.450354
EM: Round [58] log likelihood: -235708.445498
EM: Round [59] log likelihood: -235708.440901
EM: Round [60] log likelihood: -235708.436545
EM: Round [61] log likelihood: -235708.432417
EM: Round [62] log likelihood: -235708.428503
EM: Round [63] log likelihood: -235708.424789
EM: Round [64] log likelihood: -235708.421264
EM: Round [65] log likelihood: -235708.417918
EM: Round [66] log likelihood: -235708.414739
EM: Round [67] log likelihood: -235708.411718
EM: Round [68] log likelihood: -235708.408846
EM: Round [69] log likelihood: -235708.406116
EM: Round [70] log likelihood: -235708.403519
EM: Round [71] log likelihood: -235708.401047
EM: Round [72] log likelihood: -235708.398695
EM: Round [73] log likelihood: -235708.396456
EM: Round [74] log likelihood: -235708.394323
EM: Round [75] log likelihood: -235708.392292
EM: Round [76] log likelihood: -235708.390356
EM: Round [77] log likelihood: -235708.388512
EM: Round [78] log likelihood: -235708.386753
EM: Round [79] log likelihood: -235708.385077
EM: Round [80] log likelihood: -235708.383478
EM: Round [81] log likelihood: -235708.381953
EM: Round [82] log likelihood: -235708.380498
EM: Round [83] log likelihood: -235708.379109
EM: Round [84] log likelihood: -235708.377784
EM: Round [85] log likelihood: -235708.376520
EM: Round [86] log likelihood: -235708.375312
EM: Round [87] log likelihood: -235708.374159
EM: Round [88] log likelihood: -235708.373058
EM: Round [89] log likelihood: -235708.372006
EM: Round [90] log likelihood: -235708.371001
EM: Round [91] log likelihood: -235708.370041
EM: Round [92] log likelihood: -235708.369123
EM: Round [93] log likelihood: -235708.368246
EM: Round [94] log likelihood: -235708.367408
EM: Round [95] log likelihood: -235708.366607
EM: Round [96] log likelihood: -235708.365841
EM: Round [97] log likelihood: -235708.365108
EM: Round [98] log likelihood: -235708.364407
EM: Round [99] log likelihood: -235708.363737
EM: Round [100] log likelihood: -235708.363097
EM: Round [101] log likelihood: -235708.362483
EM: Round [102] log likelihood: -235708.361897
EM: Round [103] log likelihood: -235708.361335
EM: Round [104] log likelihood: -235708.360798
EM: Round [105] log likelihood: -235708.360284
EM: Round [106] log likelihood: -235708.359792
EM: Round [107] log likelihood: -235708.359321
EM: Round [108] log likelihood: -235708.358870
EM: Round [109] log likelihood: -235708.358439
EM: Round [110] log likelihood: -235708.358025
EM: Round [111] log likelihood: -235708.357630
EM: Round [112] log likelihood: -235708.357251
EM: Round [113] log likelihood: -235708.356887
EM: Round [114] log likelihood: -235708.356540
EM: Round [115] log likelihood: -235708.356207
EM: Round [116] log likelihood: -235708.355888
EM: Round [117] log likelihood: -235708.355582
EM: Round [118] log likelihood: -235708.355289
EM: Round [119] log likelihood: -235708.355008
EM: Round [120] log likelihood: -235708.354739
EM: Round [121] log likelihood: -235708.354481
EM: Round [122] log likelihood: -235708.354234
EM: Round [123] log likelihood: -235708.353997
EM: Round [124] log likelihood: -235708.353770
EM: Round [125] log likelihood: -235708.353553
EM: Round [126] log likelihood: -235708.353344
EM: Round [127] log likelihood: -235708.353144
EM: Round [128] log likelihood: -235708.352952
EM: Round [129] log likelihood: -235708.352768
EM: Round [130] log likelihood: -235708.352591
EM: Round [131] log likelihood: -235708.352422
EM: Round [132] log likelihood: -235708.352260
EM: Round [133] log likelihood: -235708.352104
EM: Round [134] log likelihood: -235708.351955
EM: Round [135] log likelihood: -235708.351811
EM: Round [136] log likelihood: -235708.351674
EM: Round [137] log likelihood: -235708.351542
EM: Round [138] log likelihood: -235708.351415
EM: Round [139] log likelihood: -235708.351293
EM: Round [140] log likelihood: -235708.351177
EM: Round [141] log likelihood: -235708.351065
EM: Round [142] log likelihood: -235708.350957
EM: Round [143] log likelihood: -235708.350854
EM: Round [144] log likelihood: -235708.350755
EM: Stopping iterations at round 144 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -235829.936360
EM: Round [1] log likelihood: -235677.954640
EM: Round [2] log likelihood: -235621.113297
EM: Round [3] log likelihood: -235594.596302
EM: Round [4] log likelihood: -235580.861710
EM: Round [5] log likelihood: -235573.296206
EM: Round [6] log likelihood: -235568.916835
EM: Round [7] log likelihood: -235566.257773
EM: Round [8] log likelihood: -235564.565699
EM: Round [9] log likelihood: -235563.439798
EM: Round [10] log likelihood: -235562.659281
EM: Round [11] log likelihood: -235562.098040
EM: Round [12] log likelihood: -235561.681335
EM: Round [13] log likelihood: -235561.363233
EM: Round [14] log likelihood: -235561.114505
EM: Round [15] log likelihood: -235560.915941
EM: Round [16] log likelihood: -235560.754535
EM: Round [17] log likelihood: -235560.621244
EM: Round [18] log likelihood: -235560.509635
EM: Round [19] log likelihood: -235560.415026
EM: Round [20] log likelihood: -235560.333951
EM: Round [21] log likelihood: -235560.263799
EM: Round [22] log likelihood: -235560.202572
EM: Round [23] log likelihood: -235560.148718
EM: Round [24] log likelihood: -235560.101021
EM: Round [25] log likelihood: -235560.058510
EM: Round [26] log likelihood: -235560.020408
EM: Round [27] log likelihood: -235559.986083
EM: Round [28] log likelihood: -235559.955016
EM: Round [29] log likelihood: -235559.926780
EM: Round [30] log likelihood: -235559.901018
EM: Round [31] log likelihood: -235559.877430
EM: Round [32] log likelihood: -235559.855764
EM: Round [33] log likelihood: -235559.835805
EM: Round [34] log likelihood: -235559.817368
EM: Round [35] log likelihood: -235559.800296
EM: Round [36] log likelihood: -235559.784452
EM: Round [37] log likelihood: -235559.769716
EM: Round [38] log likelihood: -235559.755985
EM: Round [39] log likelihood: -235559.743167
EM: Round [40] log likelihood: -235559.731183
EM: Round [41] log likelihood: -235559.719961
EM: Round [42] log likelihood: -235559.709438
EM: Round [43] log likelihood: -235559.699559
EM: Round [44] log likelihood: -235559.690273
EM: Round [45] log likelihood: -235559.681534
EM: Round [46] log likelihood: -235559.673303
EM: Round [47] log likelihood: -235559.665543
EM: Round [48] log likelihood: -235559.658220
EM: Round [49] log likelihood: -235559.651305
EM: Round [50] log likelihood: -235559.644770
EM: Round [51] log likelihood: -235559.638589
EM: Round [52] log likelihood: -235559.632740
EM: Round [53] log likelihood: -235559.627203
EM: Round [54] log likelihood: -235559.621957
EM: Round [55] log likelihood: -235559.616984
EM: Round [56] log likelihood: -235559.612268
EM: Round [57] log likelihood: -235559.607795
EM: Round [58] log likelihood: -235559.603549
EM: Round [59] log likelihood: -235559.599518
EM: Round [60] log likelihood: -235559.595689
EM: Round [61] log likelihood: -235559.592051
EM: Round [62] log likelihood: -235559.588593
EM: Round [63] log likelihood: -235559.585306
EM: Round [64] log likelihood: -235559.582180
EM: Round [65] log likelihood: -235559.579207
EM: Round [66] log likelihood: -235559.576377
EM: Round [67] log likelihood: -235559.573685
EM: Round [68] log likelihood: -235559.571122
EM: Round [69] log likelihood: -235559.568683
EM: Round [70] log likelihood: -235559.566359
EM: Round [71] log likelihood: -235559.564146
EM: Round [72] log likelihood: -235559.562038
EM: Round [73] log likelihood: -235559.560030
EM: Round [74] log likelihood: -235559.558116
EM: Round [75] log likelihood: -235559.556292
EM: Round [76] log likelihood: -235559.554553
EM: Round [77] log likelihood: -235559.552895
EM: Round [78] log likelihood: -235559.551315
EM: Round [79] log likelihood: -235559.549808
EM: Round [80] log likelihood: -235559.548370
EM: Round [81] log likelihood: -235559.546999
EM: Round [82] log likelihood: -235559.545691
EM: Round [83] log likelihood: -235559.544444
EM: Round [84] log likelihood: -235559.543253
EM: Round [85] log likelihood: -235559.542117
EM: Round [86] log likelihood: -235559.541033
EM: Round [87] log likelihood: -235559.539998
EM: Round [88] log likelihood: -235559.539011
EM: Round [89] log likelihood: -235559.538068
EM: Round [90] log likelihood: -235559.537168
EM: Round [91] log likelihood: -235559.536308
EM: Round [92] log likelihood: -235559.535488
EM: Round [93] log likelihood: -235559.534704
EM: Round [94] log likelihood: -235559.533956
EM: Round [95] log likelihood: -235559.533241
EM: Round [96] log likelihood: -235559.532559
EM: Round [97] log likelihood: -235559.531907
EM: Round [98] log likelihood: -235559.531284
EM: Round [99] log likelihood: -235559.530689
EM: Round [100] log likelihood: -235559.530120
EM: Round [101] log likelihood: -235559.529577
EM: Round [102] log likelihood: -235559.529058
EM: Round [103] log likelihood: -235559.528562
EM: Round [104] log likelihood: -235559.528088
EM: Round [105] log likelihood: -235559.527635
EM: Round [106] log likelihood: -235559.527202
EM: Round [107] log likelihood: -235559.526788
EM: Round [108] log likelihood: -235559.526392
EM: Round [109] log likelihood: -235559.526014
EM: Round [110] log likelihood: -235559.525653
EM: Round [111] log likelihood: -235559.525307
EM: Round [112] log likelihood: -235559.524976
EM: Round [113] log likelihood: -235559.524660
EM: Round [114] log likelihood: -235559.524358
EM: Round [115] log likelihood: -235559.524069
EM: Round [116] log likelihood: -235559.523793
EM: Round [117] log likelihood: -235559.523528
EM: Round [118] log likelihood: -235559.523276
EM: Round [119] log likelihood: -235559.523034
EM: Round [120] log likelihood: -235559.522802
EM: Round [121] log likelihood: -235559.522581
EM: Round [122] log likelihood: -235559.522369
EM: Round [123] log likelihood: -235559.522167
EM: Round [124] log likelihood: -235559.521973
EM: Round [125] log likelihood: -235559.521787
EM: Round [126] log likelihood: -235559.521610
EM: Round [127] log likelihood: -235559.521440
EM: Round [128] log likelihood: -235559.521278
EM: Round [129] log likelihood: -235559.521122
EM: Round [130] log likelihood: -235559.520973
EM: Round [131] log likelihood: -235559.520831
EM: Round [132] log likelihood: -235559.520694
EM: Round [133] log likelihood: -235559.520563
EM: Round [134] log likelihood: -235559.520438
EM: Round [135] log likelihood: -235559.520319
EM: Round [136] log likelihood: -235559.520204
EM: Round [137] log likelihood: -235559.520094
EM: Round [138] log likelihood: -235559.519989
EM: Round [139] log likelihood: -235559.519889
EM: Round [140] log likelihood: -235559.519792
EM: Stopping iterations at round 140 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 262696538 > /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir > /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir --annotate /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir
-done, see /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1718, filtered: 10982)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000174384.9]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000243753.5]
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287721.1]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000203413.3]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [ENSG00000229891.2]
WARNING, no entry stored in dbm for [ENSG00000241104.5]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000250241.6]
WARNING, no entry stored in dbm for [ENSG00000229498.1]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000247498.10]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000241361.8]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000250351.1]
WARNING, no entry stored in dbm for [ENSG00000235544.1]
WARNING, no entry stored in dbm for [ENSG00000184139.8]
WARNING, no entry stored in dbm for [ENSG00000215869.4]
WARNING, no entry stored in dbm for [ENSG00000287744.1]
WARNING, no entry stored in dbm for [ENSG00000254681.6]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000276735.1]
WARNING, no entry stored in dbm for [ENSG00000214248.2]
WARNING, no entry stored in dbm for [ENSG00000244128.7]
WARNING, no entry stored in dbm for [ENSG00000100068.14]
WARNING, no entry stored in dbm for [ENSG00000257219.6]
WARNING, no entry stored in dbm for [ENSG00000267779.7]
WARNING, no entry stored in dbm for [ENSG00000214076.3]
WARNING, no entry stored in dbm for [ENSG00000200875.1]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000198237.8]
WARNING, no entry stored in dbm for [ENSG00000263740.2]
WARNING, no entry stored in dbm for [ENSG00000240216.7]
WARNING, no entry stored in dbm for [ENSG00000215386.13]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000282885.2]
WARNING, no entry stored in dbm for [ENSG00000228980.4]
WARNING, no entry stored in dbm for [ENSG00000179406.8]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000224216.1]
WARNING, no entry stored in dbm for [ENSG00000286535.1]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000286182.1]
WARNING, no entry stored in dbm for [ENSG00000287320.1]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000222043.2]
WARNING, no entry stored in dbm for [ENSG00000230551.4]
WARNING, no entry stored in dbm for [ENSG00000234537.1]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000228204.2]
WARNING, no entry stored in dbm for [ENSG00000237004.4]
WARNING, no entry stored in dbm for [ENSG00000231952.3]
WARNING, no entry stored in dbm for [ENSG00000236491.1]
WARNING, no entry stored in dbm for [ENSG00000216663.3]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000253181.2]
WARNING, no entry stored in dbm for [ENSG00000279491.1]
WARNING, no entry stored in dbm for [ENSG00000274024.1]
WARNING, no entry stored in dbm for [ENSG00000234261.4]
WARNING, no entry stored in dbm for [ENSG00000286933.1]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000279217.1]
WARNING, no entry stored in dbm for [ENSG00000214425.8]
WARNING, no entry stored in dbm for [ENSG00000228293.1]
WARNING, no entry stored in dbm for [ENSG00000253438.4]
WARNING, no entry stored in dbm for [ENSG00000228775.8]
WARNING, no entry stored in dbm for [ENSG00000249072.1]
WARNING, no entry stored in dbm for [ENSG00000273674.5]
WARNING, no entry stored in dbm for [ENSG00000229839.6]
WARNING, no entry stored in dbm for [ENSG00000185596.16]
WARNING, no entry stored in dbm for [ENSG00000185596.16]
WARNING, no entry stored in dbm for [ENSG00000146556.14]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000189136.9]
WARNING, no entry stored in dbm for [ENSG00000232642.2]
WARNING, no entry stored in dbm for [ENSG00000248866.1]
WARNING, no entry stored in dbm for [ENSG00000272321.1]
WARNING, no entry stored in dbm for [ENSG00000240661.3]
WARNING, no entry stored in dbm for [ENSG00000278591.1]
WARNING, no entry stored in dbm for [ENSG00000275219.1]
WARNING, no entry stored in dbm for [ENSG00000274062.1]
WARNING, no entry stored in dbm for [ENSG00000274862.1]
WARNING, no entry stored in dbm for [ENSG00000278774.1]
WARNING, no entry stored in dbm for [ENSG00000277903.1]
WARNING, no entry stored in dbm for [ENSG00000276596.1]
WARNING, no entry stored in dbm for [ENSG00000278048.1]
WARNING, no entry stored in dbm for [ENSG00000274432.1]
WARNING, no entry stored in dbm for [ENSG00000273709.1]
WARNING, no entry stored in dbm for [ENSG00000275616.1]
WARNING, no entry stored in dbm for [ENSG00000214796.8]
WARNING, no entry stored in dbm for [ENSG00000254369.6]
WARNING, no entry stored in dbm for [ENSG00000227398.4]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000253434.8]
WARNING, no entry stored in dbm for [ENSG00000232894.1]
WARNING, no entry stored in dbm for [ENSG00000238258.1]
WARNING, no entry stored in dbm for [ENSG00000259216.2]
WARNING, no entry stored in dbm for [ENSG00000233712.1]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000241316.8]
WARNING, no entry stored in dbm for [ENSG00000287872.1]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
WARNING, no entry stored in dbm for [ENSG00000251459.2]
WARNING, no entry stored in dbm for [ENSG00000269821.1]
WARNING, no entry stored in dbm for [ENSG00000277211.1]
WARNING, no entry stored in dbm for [ENSG00000233016.7]
WARNING, no entry stored in dbm for [ENSG00000254418.1]
WARNING, no entry stored in dbm for [ENSG00000240350.3]
WARNING, no entry stored in dbm for [ENSG00000206120.11]
WARNING, no entry stored in dbm for [ENSG00000251676.2]
WARNING, no entry stored in dbm for [ENSG00000223705.9]
WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000272880.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000228111.1]
WARNING, no entry stored in dbm for [ENSG00000237298.10]
WARNING, no entry stored in dbm for [ENSG00000259216.2]
WARNING, no entry stored in dbm for [ENSG00000234884.2]
WARNING, no entry stored in dbm for [ENSG00000232884.9]
WARNING, no entry stored in dbm for [ENSG00000237149.5]
WARNING, no entry stored in dbm for [ENSG00000224523.1]
WARNING, no entry stored in dbm for [ENSG00000226200.7]
WARNING, no entry stored in dbm for [ENSG00000271382.1]
WARNING, no entry stored in dbm for [ENSG00000286668.1]
WARNING, no entry stored in dbm for [ENSG00000200156.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000281501.1]
WARNING, no entry stored in dbm for [ENSG00000287483.1]
WARNING, no entry stored in dbm for [ENSG00000250416.2]
WARNING, no entry stored in dbm for [ENSG00000234684.7]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000224897.8]
WARNING, no entry stored in dbm for [ENSG00000251441.3]
WARNING, no entry stored in dbm for [ENSG00000238086.5]
WARNING, no entry stored in dbm for [ENSG00000236204.6]
WARNING, no entry stored in dbm for [ENSG00000218048.2]
WARNING, no entry stored in dbm for [ENSG00000249684.6]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000240992.1]
WARNING, no entry stored in dbm for [ENSG00000228848.3]
WARNING, no entry stored in dbm for [ENSG00000231449.1]
WARNING, no entry stored in dbm for [ENSG00000228568.1]
WARNING, no entry stored in dbm for [ENSG00000239780.1]
WARNING, no entry stored in dbm for [ENSG00000223671.2]
WARNING, no entry stored in dbm for [ENSG00000255286.2]
WARNING, no entry stored in dbm for [ENSG00000239671.1]
WARNING, no entry stored in dbm for [ENSG00000231788.4]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000260737.6]
WARNING, no entry stored in dbm for [ENSG00000206975.1]
WARNING, no entry stored in dbm for [ENSG00000199849.1]
WARNING, no entry stored in dbm for [ENSG00000274585.1]
WARNING, no entry stored in dbm for [ENSG00000224011.1]
WARNING, no entry stored in dbm for [ENSG00000264092.2]
WARNING, no entry stored in dbm for [ENSG00000241785.3]
WARNING, no entry stored in dbm for [ENSG00000242999.3]
WARNING, no entry stored in dbm for [ENSG00000218048.2]
WARNING, no entry stored in dbm for [ENSG00000254040.2]
WARNING, no entry stored in dbm for [ENSG00000259516.2]
WARNING, no entry stored in dbm for [ENSG00000229992.1]
WARNING, no entry stored in dbm for [ENSG00000287236.1]
WARNING, no entry stored in dbm for [ENSG00000260361.1]
WARNING, no entry stored in dbm for [ENSG00000269386.5]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000249830.1]
WARNING, no entry stored in dbm for [ENSG00000254842.6]
WARNING, no entry stored in dbm for [ENSG00000286348.1]
WARNING, no entry stored in dbm for [ENSG00000248927.1]
WARNING, no entry stored in dbm for [ENSG00000283602.1]
WARNING, no entry stored in dbm for [ENSG00000205771.6]
WARNING, no entry stored in dbm for [ENSG00000124224.17]
WARNING, no entry stored in dbm for [ENSG00000235431.2]
WARNING, no entry stored in dbm for [ENSG00000205771.6]
WARNING, no entry stored in dbm for [ENSG00000067601.8]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000237468.2]
WARNING, no entry stored in dbm for [ENSG00000244953.1]
WARNING, no entry stored in dbm for [ENSG00000127957.18]
WARNING, no entry stored in dbm for [ENSG00000264107.1]
WARNING, no entry stored in dbm for [ENSG00000279110.1]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000224429.8]
WARNING, no entry stored in dbm for [ENSG00000287643.1]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000258057.6]
WARNING, no entry stored in dbm for [ENSG00000259925.1]
WARNING, no entry stored in dbm for [ENSG00000251182.2]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000189223.15]
WARNING, no entry stored in dbm for [ENSG00000215546.2]
WARNING, no entry stored in dbm for [ENSG00000258162.4]
WARNING, no entry stored in dbm for [ENSG00000170356.9]
WARNING, no entry stored in dbm for [ENSG00000240288.8]
WARNING, no entry stored in dbm for [ENSG00000229873.1]
WARNING, no entry stored in dbm for [ENSG00000287611.1]
WARNING, no entry stored in dbm for [ENSG00000226328.7]
WARNING, no entry stored in dbm for [ENSG00000213376.4]
WARNING, no entry stored in dbm for [ENSG00000249673.7]
WARNING, no entry stored in dbm for [ENSG00000214425.8]
WARNING, no entry stored in dbm for [ENSG00000088340.17]
WARNING, no entry stored in dbm for [ENSG00000198496.12]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000223361.5]
WARNING, no entry stored in dbm for [ENSG00000227632.2]
WARNING, no entry stored in dbm for [ENSG00000259820.1]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000226200.7]
WARNING, no entry stored in dbm for [ENSG00000253795.1]
WARNING, no entry stored in dbm for [ENSG00000232551.2]
WARNING, no entry stored in dbm for [ENSG00000205360.6]
WARNING, no entry stored in dbm for [ENSG00000275449.1]
WARNING, no entry stored in dbm for [ENSG00000234769.7]
WARNING, no entry stored in dbm for [ENSG00000283805.1]
WARNING, no entry stored in dbm for [ENSG00000203709.12]
WARNING, no entry stored in dbm for [ENSG00000230937.12]
WARNING, no entry stored in dbm for [ENSG00000233325.3]
WARNING, no entry stored in dbm for [ENSG00000283240.1]
WARNING, no entry stored in dbm for [ENSG00000283240.1]
WARNING, no entry stored in dbm for [ENSG00000287485.1]
WARNING, no entry stored in dbm for [ENSG00000249898.8]
WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [ENSG00000251508.1]
WARNING, no entry stored in dbm for [ENSG00000254934.5]
WARNING, no entry stored in dbm for [ENSG00000288598.2]
WARNING, no entry stored in dbm for [ENSG00000267278.6]
WARNING, no entry stored in dbm for [ENSG00000248973.3]
WARNING, no entry stored in dbm for [ENSG00000253223.1]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000224888.4]
WARNING, no entry stored in dbm for [ENSG00000281560.1]
WARNING, no entry stored in dbm for [ENSG00000240429.1]
WARNING, no entry stored in dbm for [ENSG00000237588.2]
WARNING, no entry stored in dbm for [ENSG00000100068.14]
WARNING, no entry stored in dbm for [ENSG00000224072.1]
WARNING, no entry stored in dbm for [ENSG00000249072.1]
WARNING, no entry stored in dbm for [ENSG00000256751.6]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000234476.3]
WARNING, no entry stored in dbm for [ENSG00000248238.2]
WARNING, no entry stored in dbm for [ENSG00000261064.1]
WARNING, no entry stored in dbm for [ENSG00000277561.5]
WARNING, no entry stored in dbm for [ENSG00000254689.3]
WARNING, no entry stored in dbm for [ENSG00000254101.7]
WARNING, no entry stored in dbm for [ENSG00000239454.1]
WARNING, no entry stored in dbm for [ENSG00000280721.1]
WARNING, no entry stored in dbm for [ENSG00000266913.1]
WARNING, no entry stored in dbm for [ENSG00000232100.1]
WARNING, no entry stored in dbm for [ENSG00000225564.6]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000277147.6]
WARNING, no entry stored in dbm for [ENSG00000233208.6]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000224405.1]
WARNING, no entry stored in dbm for [ENSG00000232117.2]
WARNING, no entry stored in dbm for [ENSG00000232803.1]
WARNING, no entry stored in dbm for [ENSG00000226620.8]
WARNING, no entry stored in dbm for [ENSG00000227764.2]
WARNING, no entry stored in dbm for [ENSG00000215835.2]
WARNING, no entry stored in dbm for [ENSG00000233609.3]
WARNING, no entry stored in dbm for [ENSG00000214110.3]
WARNING, no entry stored in dbm for [ENSG00000212589.1]
WARNING, no entry stored in dbm for [ENSG00000257167.2]
WARNING, no entry stored in dbm for [ENSG00000243176.6]
WARNING, no entry stored in dbm for [ENSG00000287929.1]
WARNING, no entry stored in dbm for [ENSG00000234102.1]
WARNING, no entry stored in dbm for [ENSG00000229222.1]
WARNING, no entry stored in dbm for [ENSG00000226145.7]
WARNING, no entry stored in dbm for [ENSG00000256852.1]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000233652.1]
WARNING, no entry stored in dbm for [ENSG00000253218.1]
WARNING, no entry stored in dbm for [ENSG00000236816.3]
WARNING, no entry stored in dbm for [ENSG00000224927.2]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000216657.1]
WARNING, no entry stored in dbm for [ENSG00000236778.8]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000237424.1]
WARNING, no entry stored in dbm for [ENSG00000253138.5]
WARNING, no entry stored in dbm for [ENSG00000276975.3]
WARNING, no entry stored in dbm for [ENSG00000182841.12]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000237380.7]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000215492.6]
WARNING, no entry stored in dbm for [ENSG00000226188.2]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000278970.2]
WARNING, no entry stored in dbm for [ENSG00000240809.1]
WARNING, no entry stored in dbm for [ENSG00000258888.1]
WARNING, no entry stored in dbm for [ENSG00000227725.3]
WARNING, no entry stored in dbm for [ENSG00000286049.1]
WARNING, no entry stored in dbm for [ENSG00000277561.5]
WARNING, no entry stored in dbm for [ENSG00000244952.2]
WARNING, no entry stored in dbm for [ENSG00000239533.6]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000257915.1]
WARNING, no entry stored in dbm for [ENSG00000250959.2]
WARNING, no entry stored in dbm for [ENSG00000196295.12]
WARNING, no entry stored in dbm for [ENSG00000232392.1]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000164845.16]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000233980.1]
WARNING, no entry stored in dbm for [ENSG00000248290.1]
WARNING, no entry stored in dbm for [ENSG00000275625.1]
WARNING, no entry stored in dbm for [ENSG00000173295.8]
WARNING, no entry stored in dbm for [ENSG00000205847.6]
WARNING, no entry stored in dbm for [ENSG00000173295.8]
WARNING, no entry stored in dbm for [ENSG00000244699.1]
WARNING, no entry stored in dbm for [ENSG00000226777.7]
WARNING, no entry stored in dbm for [ENSG00000261240.1]
WARNING, no entry stored in dbm for [ENSG00000250343.1]
WARNING, no entry stored in dbm for [ENSG00000264546.1]
WARNING, no entry stored in dbm for [ENSG00000228868.3]
WARNING, no entry stored in dbm for [ENSG00000231231.5]
WARNING, no entry stored in dbm for [ENSG00000286046.1]
WARNING, no entry stored in dbm for [ENSG00000276960.1]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
WARNING, no entry stored in dbm for [ENSG00000230366.9]
WARNING, no entry stored in dbm for [ENSG00000229358.3]
WARNING, no entry stored in dbm for [ENSG00000183784.7]
WARNING, no entry stored in dbm for [ENSG00000231793.5]
WARNING, no entry stored in dbm for [ENSG00000239219.2]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000260689.2]
WARNING, no entry stored in dbm for [ENSG00000233178.7]
WARNING, no entry stored in dbm for [ENSG00000265802.2]
WARNING, no entry stored in dbm for [ENSG00000287962.1]
WARNING, no entry stored in dbm for [ENSG00000232679.2]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000229807.12]
WARNING, no entry stored in dbm for [ENSG00000259343.7]
WARNING, no entry stored in dbm for [ENSG00000233937.7]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000233937.7]
WARNING, no entry stored in dbm for [ENSG00000248103.1]
WARNING, no entry stored in dbm for [ENSG00000239920.2]
WARNING, no entry stored in dbm for [ENSG00000279851.2]
WARNING, no entry stored in dbm for [ENSG00000270533.2]
WARNING, no entry stored in dbm for [ENSG00000231252.3]
WARNING, no entry stored in dbm for [ENSG00000234929.2]
WARNING, no entry stored in dbm for [ENSG00000235142.10]
WARNING, no entry stored in dbm for [ENSG00000226791.7]
WARNING, no entry stored in dbm for [ENSG00000287495.1]
WARNING, no entry stored in dbm for [ENSG00000223559.1]
WARNING, no entry stored in dbm for [ENSG00000267419.2]
WARNING, no entry stored in dbm for [ENSG00000259376.1]
WARNING, no entry stored in dbm for [ENSG00000197847.12]
WARNING, no entry stored in dbm for [ENSG00000279175.1]
WARNING, no entry stored in dbm for [ENSG00000230155.6]
WARNING, no entry stored in dbm for [ENSG00000240875.6]
WARNING, no entry stored in dbm for [ENSG00000225964.6]
WARNING, no entry stored in dbm for [ENSG00000228775.8]
WARNING, no entry stored in dbm for [ENSG00000226800.5]
WARNING, no entry stored in dbm for [ENSG00000287225.1]
WARNING, no entry stored in dbm for [ENSG00000260882.1]
WARNING, no entry stored in dbm for [ENSG00000287768.1]
WARNING, no entry stored in dbm for [ENSG00000254811.5]
WARNING, no entry stored in dbm for [ENSG00000260037.5]
WARNING, no entry stored in dbm for [ENSG00000263647.1]
WARNING, no entry stored in dbm for [ENSG00000229956.11]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000266993.3]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000249816.7]
WARNING, no entry stored in dbm for [ENSG00000213247.3]
WARNING, no entry stored in dbm for [ENSG00000198221.10]
WARNING, no entry stored in dbm for [ENSG00000237224.4]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000266913.1]
WARNING, no entry stored in dbm for [ENSG00000214198.8]
WARNING, no entry stored in dbm for [ENSG00000239415.1]
WARNING, no entry stored in dbm for [ENSG00000255479.1]
WARNING, no entry stored in dbm for [ENSG00000254855.1]
WARNING, no entry stored in dbm for [ENSG00000245156.1]
WARNING, no entry stored in dbm for [ENSG00000256035.1]
WARNING, no entry stored in dbm for [ENSG00000283633.1]
WARNING, no entry stored in dbm for [ENSG00000272578.5]
WARNING, no entry stored in dbm for [ENSG00000244723.3]
WARNING, no entry stored in dbm for [ENSG00000243095.1]
WARNING, no entry stored in dbm for [ENSG00000261019.1]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000267302.5]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000232085.1]
WARNING, no entry stored in dbm for [ENSG00000231827.3]
WARNING, no entry stored in dbm for [ENSG00000227827.3]
WARNING, no entry stored in dbm for [ENSG00000272100.1]
WARNING, no entry stored in dbm for [ENSG00000236154.1]
WARNING, no entry stored in dbm for [ENSG00000232499.2]
WARNING, no entry stored in dbm for [ENSG00000287398.1]
WARNING, no entry stored in dbm for [ENSG00000275830.2]
WARNING, no entry stored in dbm for [ENSG00000282772.1]
WARNING, no entry stored in dbm for [ENSG00000282772.1]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000231616.9]
WARNING, no entry stored in dbm for [ENSG00000246203.2]
WARNING, no entry stored in dbm for [ENSG00000225545.1]
WARNING, no entry stored in dbm for [ENSG00000279631.1]
WARNING, no entry stored in dbm for [ENSG00000197670.6]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000273149.1]
WARNING, no entry stored in dbm for [ENSG00000283283.2]
WARNING, no entry stored in dbm for [ENSG00000286073.1]
WARNING, no entry stored in dbm for [ENSG00000283384.1]
WARNING, no entry stored in dbm for [ENSG00000283773.1]
WARNING, no entry stored in dbm for [ENSG00000287430.1]
WARNING, no entry stored in dbm for [ENSG00000286594.1]
WARNING, no entry stored in dbm for [ENSG00000286594.1]
WARNING, no entry stored in dbm for [ENSG00000204684.4]
WARNING, no entry stored in dbm for [ENSG00000257522.7]
WARNING, no entry stored in dbm for [ENSG00000258860.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000261116.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000280011.1]
WARNING, no entry stored in dbm for [ENSG00000280184.2]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000241158.7]
WARNING, no entry stored in dbm for [ENSG00000255693.3]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000276850.5]
WARNING, no entry stored in dbm for [ENSG00000235181.1]
WARNING, no entry stored in dbm for [ENSG00000276216.1]
WARNING, no entry stored in dbm for [ENSG00000274642.1]
WARNING, no entry stored in dbm for [ENSG00000234225.2]
WARNING, no entry stored in dbm for [ENSG00000225370.1]
WARNING, no entry stored in dbm for [ENSG00000277089.4]
WARNING, no entry stored in dbm for [ENSG00000281741.2]
WARNING, no entry stored in dbm for [ENSG00000264207.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000242073.2]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000248969.1]
WARNING, no entry stored in dbm for [ENSG00000262187.2]
WARNING, no entry stored in dbm for [ENSG00000283345.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000288075.1]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000234241.1]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000285108.1]
WARNING, no entry stored in dbm for [ENSG00000262869.1]
WARNING, no entry stored in dbm for [ENSG00000179967.11]
WARNING, no entry stored in dbm for [ENSG00000287392.1]
WARNING, no entry stored in dbm for [ENSG00000248551.1]
WARNING, no entry stored in dbm for [ENSG00000286494.1]
WARNING, no entry stored in dbm for [ENSG00000249001.5]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000227987.1]
WARNING, no entry stored in dbm for [ENSG00000267053.8]
WARNING, no entry stored in dbm for [ENSG00000223486.1]
WARNING, no entry stored in dbm for [ENSG00000260417.1]
WARNING, no entry stored in dbm for [ENSG00000276791.1]
WARNING, no entry stored in dbm for [ENSG00000278734.1]
WARNING, no entry stored in dbm for [ENSG00000270839.1]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [ENSG00000287826.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000259722.2]
WARNING, no entry stored in dbm for [ENSG00000284698.1]
WARNING, no entry stored in dbm for [ENSG00000215378.3]
WARNING, no entry stored in dbm for [ENSG00000284698.1]
WARNING, no entry stored in dbm for [ENSG00000234178.1]
WARNING, no entry stored in dbm for [ENSG00000284698.1]
WARNING, no entry stored in dbm for [ENSG00000285744.1]
WARNING, no entry stored in dbm for [ENSG00000257607.1]
WARNING, no entry stored in dbm for [ENSG00000272990.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000243584.1]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000284605.1]
WARNING, no entry stored in dbm for [ENSG00000228862.4]
WARNING, no entry stored in dbm for [ENSG00000251613.4]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000240535.8]
WARNING, no entry stored in dbm for [ENSG00000185684.15]
WARNING, no entry stored in dbm for [ENSG00000260457.2]
WARNING, no entry stored in dbm for [ENSG00000259273.1]
WARNING, no entry stored in dbm for [ENSG00000267040.6]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000259354.5]
WARNING, no entry stored in dbm for [ENSG00000273765.1]
WARNING, no entry stored in dbm for [ENSG00000287555.1]
WARNING, no entry stored in dbm for [ENSG00000235774.2]
WARNING, no entry stored in dbm for [ENSG00000240418.1]
WARNING, no entry stored in dbm for [ENSG00000284430.1]
WARNING, no entry stored in dbm for [ENSG00000286307.1]
WARNING, no entry stored in dbm for [ENSG00000250934.2]
WARNING, no entry stored in dbm for [ENSG00000287306.1]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000261329.6]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000286030.2]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000237720.2]
WARNING, no entry stored in dbm for [ENSG00000257453.1]
WARNING, no entry stored in dbm for [ENSG00000268605.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000268416.1]
WARNING, no entry stored in dbm for [ENSG00000259410.5]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000267121.6]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000277534.1]
WARNING, no entry stored in dbm for [ENSG00000236754.5]
WARNING, no entry stored in dbm for [ENSG00000286739.1]
WARNING, no entry stored in dbm for [ENSG00000267324.1]
WARNING, no entry stored in dbm for [ENSG00000268189.2]
WARNING, no entry stored in dbm for [ENSG00000272918.1]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000230392.1]
WARNING, no entry stored in dbm for [ENSG00000287643.1]
WARNING, no entry stored in dbm for [ENSG00000277283.1]
WARNING, no entry stored in dbm for [ENSG00000274177.1]
WARNING, no entry stored in dbm for [ENSG00000285486.1]
WARNING, no entry stored in dbm for [ENSG00000287827.1]
WARNING, no entry stored in dbm for [ENSG00000283366.2]
WARNING, no entry stored in dbm for [ENSG00000281376.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.sWlV38Bo0A/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)