Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/ce67f3e179c3f0de64656c52c0ce83/aih-tih-sc-9f6030-R1_A23WJ53LT4_1.Chimeric.out.junction Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/71/b59445758050f474581fc60429bad8/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6b/6ed4efcc46d4582647023f02415785/aih-tih-sc-9f6030-R1_A23WJ53LT4_1_1.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6b/6ed4efcc46d4582647023f02415785/aih-tih-sc-9f6030-R1_A23WJ53LT4_1_2.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/71/b59445758050f474581fc60429bad8/.command.run ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.sWlV38Bo0A/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary -sample contains 262696538 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir -J /tmp/nxf.sWlV38Bo0A/aih-tih-sc-9f6030-R1_A23WJ53LT4_1.Chimeric.out.junction -O /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.sWlV38Bo0A/aih-tih-sc-9f6030-R1_A23WJ53LT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=75000.00/min [20000], rate=85714.29/min [30000], rate=81818.18/min [40000], rate=82758.62/min [50000], rate=85714.29/min [60000], rate=87804.88/min [70000], rate=87500.00/min [80000], rate=90566.04/min [90000], rate=93103.45/min [100000], rate=95238.10/min [110000], rate=97058.82/min [120000], rate=98630.14/min [130000], rate=97500.00/min [140000], rate=89361.70/min [150000], rate=81818.18/min [160000], rate=76190.48/min [170000], rate=71830.99/min [180000], rate=68789.81/min [190000], rate=65895.95/min [200000], rate=64171.12/min [210000], rate=62068.97/min [220000], rate=60550.46/min [230000], rate=59482.76/min [240000], rate=58299.60/min [250000], rate=57692.31/min [260000], rate=57142.86/min [270000], rate=56445.99/min [280000], rate=56187.29/min [290000], rate=55591.05/min [300000], rate=55384.62/min [310000], rate=55522.39/min [320000], rate=55014.33/min [330000], rate=54545.45/min [340000], rate=54545.45/min [350000], rate=54687.50/min [360000], rate=54961.83/min [370000], rate=55086.85/min [380000], rate=55339.81/min [390000], rate=55450.24/min [400000], rate=55045.87/min [410000], rate=54545.45/min [420000], rate=54427.65/min [430000], rate=54201.68/min [440000], rate=53987.73/min [450000], rate=54216.87/min [460000], rate=54437.87/min [470000], rate=54757.28/min [480000], rate=55066.92/min [490000], rate=55367.23/min [500000], rate=55658.63/min [510000], rate=56146.79/min [520000], rate=56830.60/min [530000], rate=57297.30/min [540000], rate=57651.25/min [550000], rate=57894.74/min [560000], rate=58131.49/min [570000], rate=58561.64/min [580000], rate=58389.26/min [590000], rate=58319.60/min [600000], rate=58158.32/min [610000], rate=58003.17/min [620000], rate=57943.93/min [630000], rate=57975.46/min [640000], rate=57831.33/min [650000], rate=57777.78/min [660000], rate=57641.92/min [670000], rate=57428.57/min [680000], rate=57303.37/min [690000], rate=57261.41/min [700000], rate=57220.71/min [710000], rate=57335.13/min [720000], rate=57294.43/min [730000], rate=57404.98/min [740000], rate=57438.55/min [750000], rate=57324.84/min [760000], rate=57358.49/min [770000], rate=57391.30/min [780000], rate=57073.17/min [790000], rate=56766.47/min [800000], rate=56537.10/min [810000], rate=56315.18/min [820000], rate=56228.57/min [830000], rate=56144.31/min [840000], rate=56124.72/min [850000], rate=56043.96/min [860000], rate=56086.96/min [870000], rate=56068.74/min [880000], rate=56230.03/min [890000], rate=56507.94/min [900000], rate=56842.11/min [910000], rate=57053.29/min [920000], rate=57320.87/min [930000], rate=57644.63/min [940000], rate=57905.54/min [950000], rate=58461.54/min [960000], rate=59016.39/min [970000], rate=59570.11/min [980000], rate=60122.70/min [990000], rate=60612.24/min [1000000], rate=61099.80/min [1010000], rate=61648.02/min [1020000], rate=62131.98/min [1030000], rate=62677.48/min [1040000], rate=63221.88/min [1050000], rate=63700.71/min [1060000], rate=64112.90/min [1070000], rate=64457.83/min [1080000], rate=64477.61/min [1090000], rate=64816.65/min [1100000], rate=64769.38/min [1110000], rate=64849.07/min [1120000], rate=64864.86/min [1130000], rate=65004.79/min [1140000], rate=65267.18/min [1150000], rate=65776.93/min [1160000], rate=66285.71/min [1170000], rate=66793.53/min [1180000], rate=67364.41/min [1190000], rate=67806.27/min [1200000], rate=68311.20/min [1210000], rate=68815.17/min [1220000], rate=69318.18/min [1230000], rate=69295.77/min [1240000], rate=69080.78/min [1250000], rate=68997.24/min [1260000], rate=68664.85/min [1270000], rate=68463.61/min [1280000], rate=68817.20/min [1290000], rate=69045.50/min [1300000], rate=69026.55/min [1310000], rate=69312.17/min [1320000], rate=69170.31/min [1330000], rate=69090.91/min [1340000], rate=69012.88/min [1350000], rate=69408.74/min [1360000], rate=69803.25/min [1370000], rate=70196.41/min [1380000], rate=70588.24/min [1390000], rate=71039.18/min [1400000], rate=71428.57/min [1410000], rate=71877.66/min [1420000], rate=72325.98/min [1430000], rate=72773.54/min [1440000], rate=73220.34/min [1450000], rate=73604.06/min [1460000], rate=73924.05/min [1470000], rate=74117.65/min [1480000], rate=74185.46/min [1490000], rate=74190.87/min [1500000], rate=74196.21/min [1510000], rate=74201.47/min [1520000], rate=74206.67/min [1530000], rate=74092.01/min [1540000], rate=74157.30/min [1550000], rate=74400.00/min [1560000], rate=74760.38/min [1570000], rate=75179.57/min [1580000], rate=75537.85/min [1590000], rate=75955.41/min [1600000], rate=76372.32/min [1610000], rate=76484.56/min [1620000], rate=76295.13/min [1630000], rate=76049.77/min [1640000], rate=75925.93/min [1650000], rate=75572.52/min [1660000], rate=75454.55/min [1670000], rate=75679.76/min [1680000], rate=75903.61/min [1690000], rate=75841.44/min [1700000], rate=75667.66/min [1710000], rate=75607.96/min [1720000], rate=75826.60/min [1730000], rate=75821.77/min [1740000], rate=75761.97/min [1750000], rate=75702.96/min [1760000], rate=75644.70/min [1770000], rate=75748.93/min [1780000], rate=76068.38/min [1790000], rate=76441.28/min [1800000], rate=76813.66/min [1810000], rate=77185.50/min [1820000], rate=77501.77/min [1830000], rate=77872.34/min [1840000], rate=78242.38/min [1850000], rate=78500.71/min [1860000], rate=78315.79/min [1870000], rate=78188.15/min [1880000], rate=77954.39/min [1890000], rate=77831.16/min [1900000], rate=77709.61/min [1910000], rate=77589.71/min [1920000], rate=77523.55/min [1930000], rate=77613.94/min [1940000], rate=77496.67/min [1950000], rate=77176.78/min [1960000], rate=76712.33/min [1970000], rate=76405.95/min [1980000], rate=76056.34/min [1990000], rate=75665.40/min [2000000], rate=75424.26/min [2010000], rate=75375.00/min [2020000], rate=75139.49/min [2030000], rate=74907.75/min [2040000], rate=74770.92/min [2050000], rate=74635.92/min [2060000], rate=74457.83/min [2070000], rate=74326.75/min [2080000], rate=74285.71/min [2090000], rate=74289.10/min [2100000], rate=74248.67/min [2110000], rate=74252.20/min [2120000], rate=74255.69/min [2130000], rate=74259.15/min [2140000], rate=73581.66/min [2150000], rate=72553.43/min [2160000], rate=72321.43/min [2170000], rate=72093.02/min [2180000], rate=71828.67/min [2190000], rate=71490.75/min [2200000], rate=71351.35/min [2210000], rate=71175.52/min [2220000], rate=71002.13/min [2230000], rate=70458.14/min [2240000], rate=70256.14/min [2250000], rate=70093.46/min [2260000], rate=69969.04/min [2270000], rate=69738.86/min [2280000], rate=69653.77/min [2290000], rate=69604.86/min [2300000], rate=69591.53/min [2310000], rate=69543.40/min [2320000], rate=69530.47/min [2330000], rate=69517.65/min [2340000], rate=69504.95/min [2350000], rate=69526.63/min [2360000], rate=69513.99/min [2370000], rate=69535.45/min [2380000], rate=69556.75/min -building interval tree based on /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=75000.00/min [20000], rate=80000.00/min [30000], rate=81818.18/min [40000], rate=85714.29/min [50000], rate=88235.29/min [60000], rate=90000.00/min [70000], rate=91304.35/min [80000], rate=96000.00/min [90000], rate=98181.82/min [100000], rate=93750.00/min [110000], rate=84615.38/min [120000], rate=80000.00/min [130000], rate=78000.00/min [140000], rate=76363.64/min [150000], rate=74380.17/min [160000], rate=73282.44/min [170000], rate=72340.43/min [180000], rate=71523.18/min [190000], rate=71250.00/min [200000], rate=71005.92/min [210000], rate=71186.44/min [220000], rate=70967.74/min [230000], rate=71134.02/min [240000], rate=71287.13/min [250000], rate=71770.33/min [260000], rate=72558.14/min [270000], rate=73303.17/min [280000], rate=74336.28/min [290000], rate=75000.00/min [300000], rate=75630.25/min [310000], rate=76543.21/min [320000], rate=75590.55/min [330000], rate=73880.60/min [340000], rate=72857.14/min [350000], rate=71917.81/min [360000], rate=71287.13/min [370000], rate=70700.64/min [380000], rate=70153.85/min [390000], rate=69642.86/min [400000], rate=69565.22/min [410000], rate=67768.60/min [420000], rate=65454.55/min [430000], rate=65151.52/min [440000], rate=65185.19/min [450000], rate=64903.85/min [460000], rate=64037.12/min [470000], rate=63656.88/min [480000], rate=63716.81/min [490000], rate=63225.81/min [500000], rate=62761.51/min [510000], rate=62833.68/min [520000], rate=62650.60/min [530000], rate=62970.30/min [540000], rate=63281.25/min [550000], rate=63706.56/min [560000], rate=63878.33/min [570000], rate=64285.71/min [580000], rate=64684.01/min [590000], rate=64954.13/min [600000], rate=65217.39/min [610000], rate=65240.64/min [620000], rate=65492.96/min [630000], rate=65511.27/min [640000], rate=65417.38/min [650000], rate=65436.24/min [660000], rate=65890.18/min [670000], rate=66336.63/min [680000], rate=66666.67/min [690000], rate=66990.29/min [700000], rate=66455.70/min [710000], rate=64350.45/min [720000], rate=62427.75/min [730000], rate=61951.91/min [740000], rate=61924.69/min [750000], rate=61813.19/min [760000], rate=61872.46/min [770000], rate=61847.39/min [780000], rate=60858.26/min [790000], rate=59924.15/min [800000], rate=59553.35/min [810000], rate=59558.82/min [820000], rate=59205.78/min [830000], rate=58934.91/min [840000], rate=58536.59/min [850000], rate=57432.43/min [860000], rate=56331.88/min [870000], rate=55531.91/min [880000], rate=55462.18/min [890000], rate=55336.79/min [900000], rate=54490.41/min [910000], rate=53740.16/min [920000], rate=53179.19/min [930000], rate=52840.91/min [940000], rate=52270.62/min [950000], rate=51865.33/min [960000], rate=51428.57/min [970000], rate=51322.75/min [980000], rate=51264.17/min [990000], rate=51251.08/min [1000000], rate=51282.05/min [1010000], rate=51355.93/min [1020000], rate=51602.02/min [1030000], rate=51889.17/min [1040000], rate=52000.00/min [1050000], rate=52109.18/min [1060000], rate=52216.75/min [1070000], rate=52365.42/min [1080000], rate=52512.16/min [1090000], rate=52699.44/min [1100000], rate=52884.62/min [1110000], rate=52773.38/min [1120000], rate=52012.38/min [1130000], rate=51285.93/min [1140000], rate=50779.51/min [1150000], rate=50181.82/min [1160000], rate=49607.98/min [1170000], rate=49228.61/min [1180000], rate=49030.47/min [1190000], rate=48737.20/min [1200000], rate=48452.22/min [1210000], rate=48303.39/min [1220000], rate=48380.70/min [1230000], rate=48393.44/min [1240000], rate=48405.99/min [1250000], rate=48449.61/min [1260000], rate=48461.54/min [1270000], rate=48596.94/min [1280000], rate=48669.20/min [1290000], rate=48802.02/min [1300000], rate=48902.82/min [1310000], rate=49002.49/min [1320000], rate=49040.25/min [1330000], rate=49137.93/min [1340000], rate=49264.71/min [1350000], rate=49330.09/min [1360000], rate=49484.54/min [1370000], rate=49577.80/min [1380000], rate=49610.55/min [1390000], rate=49583.83/min [1400000], rate=49557.52/min [1410000], rate=49589.68/min [1420000], rate=49708.28/min [1430000], rate=49854.74/min [1440000], rate=50000.00/min [1450000], rate=50144.09/min [1460000], rate=50315.91/min [1470000], rate=50457.67/min [1480000], rate=50598.29/min [1490000], rate=50737.80/min [1500000], rate=50876.20/min [1510000], rate=51013.51/min [1520000], rate=51178.45/min [1530000], rate=51371.01/min [1540000], rate=51476.32/min [1550000], rate=51666.67/min [1560000], rate=51855.96/min [1570000], rate=52015.46/min [1580000], rate=52145.21/min [1590000], rate=52302.63/min [1600000], rate=52401.75/min [1610000], rate=52414.54/min [1620000], rate=52398.92/min [1630000], rate=52383.50/min [1640000], rate=52424.08/min [1650000], rate=52436.44/min [1660000], rate=52256.03/min [1670000], rate=51917.10/min [1680000], rate=51639.34/min [1690000], rate=51445.97/min [1700000], rate=51333.67/min [1710000], rate=51428.57/min [1720000], rate=51522.72/min [1730000], rate=51667.50/min [1740000], rate=51811.41/min [1750000], rate=51928.78/min [1760000], rate=51942.94/min [1770000], rate=51956.95/min [1780000], rate=51996.11/min [1790000], rate=52110.63/min [1800000], rate=52300.24/min [1810000], rate=52463.77/min [1820000], rate=52626.51/min [1830000], rate=52788.46/min [1840000], rate=52873.56/min [1850000], rate=52882.32/min [1860000], rate=52916.07/min [1870000], rate=52924.53/min [1880000], rate=52932.90/min [1890000], rate=52965.90/min [1900000], rate=53047.93/min [1910000], rate=53129.35/min [1920000], rate=53185.60/min [1930000], rate=53265.87/min [1940000], rate=53345.55/min [1950000], rate=53449.06/min [1960000], rate=53551.91/min [1970000], rate=53654.11/min [1980000], rate=53755.66/min [1990000], rate=53832.28/min [2000000], rate=53908.36/min [2010000], rate=54032.26/min [2020000], rate=54131.31/min [2030000], rate=54350.74/min [2040000], rate=54594.11/min [2050000], rate=54837.27/min [2060000], rate=55006.68/min [2070000], rate=55150.98/min [2080000], rate=55270.15/min [2090000], rate=55388.69/min [2100000], rate=55506.61/min [2110000], rate=55648.35/min [2120000], rate=55740.58/min [2130000], rate=55759.16/min [2140000], rate=55801.83/min [2150000], rate=55844.16/min [2160000], rate=55934.40/min [2170000], rate=56000.00/min [2180000], rate=55993.15/min [2190000], rate=56058.02/min [2200000], rate=56003.39/min [2210000], rate=56020.28/min [2220000], rate=55989.91/min [2230000], rate=56077.12/min [2240000], rate=56187.29/min [2250000], rate=56296.91/min [2260000], rate=56405.99/min [2270000], rate=56514.52/min [2280000], rate=56645.96/min [2290000], rate=56823.82/min [2300000], rate=57024.79/min [2310000], rate=57201.82/min [2320000], rate=57307.53/min [2330000], rate=57412.73/min [2340000], rate=57588.19/min [2350000], rate=57692.31/min -building interval tree based on /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=100000.00/min [20000], rate=92307.69/min [30000], rate=78260.87/min [40000], rate=77419.35/min [50000], rate=85714.29/min [60000], rate=92307.69/min [70000], rate=95454.55/min [80000], rate=97959.18/min [90000], rate=100000.00/min [100000], rate=98360.66/min [110000], rate=97058.82/min [120000], rate=96000.00/min [130000], rate=96296.30/min [140000], rate=97674.42/min [150000], rate=98901.10/min [160000], rate=100000.00/min [170000], rate=100990.10/min [180000], rate=101886.79/min [190000], rate=100884.96/min [200000], rate=96774.19/min [210000], rate=94029.85/min [220000], rate=91034.48/min [230000], rate=89610.39/min [240000], rate=88888.89/min [250000], rate=87719.30/min [260000], rate=87150.84/min [270000], rate=87096.77/min [280000], rate=87046.63/min [290000], rate=86567.16/min [300000], rate=86124.40/min [310000], rate=86511.63/min [320000], rate=86877.83/min [330000], rate=87224.67/min [340000], rate=87931.03/min [350000], rate=88235.29/min [360000], rate=88524.59/min [370000], rate=89878.54/min [380000], rate=90836.65/min [390000], rate=91406.25/min [400000], rate=93023.26/min [410000], rate=94252.87/min [420000], rate=93680.30/min [430000], rate=92142.86/min [440000], rate=90721.65/min [450000], rate=90000.00/min [460000], rate=88745.98/min [470000], rate=87306.50/min [480000], rate=86486.49/min [490000], rate=85714.29/min [500000], rate=84985.84/min [510000], rate=84530.39/min [520000], rate=84324.32/min [530000], rate=84126.98/min [540000], rate=84155.84/min [550000], rate=84183.67/min [560000], rate=84210.53/min [570000], rate=84444.44/min [580000], rate=84671.53/min [590000], rate=84689.00/min [600000], rate=84705.88/min [610000], rate=85514.02/min [620000], rate=86310.90/min [630000], rate=86896.55/min [640000], rate=87671.23/min [650000], rate=87837.84/min [660000], rate=87417.22/min [670000], rate=87201.74/min [680000], rate=85000.00/min [690000], rate=83299.80/min [700000], rate=81712.06/min [710000], rate=78165.14/min [720000], rate=75000.00/min [730000], rate=72757.48/min [740000], rate=72786.89/min [750000], rate=72933.55/min [760000], rate=70479.13/min [770000], rate=68041.24/min [780000], rate=65363.13/min [790000], rate=63284.38/min [800000], rate=61855.67/min [810000], rate=60074.17/min [820000], rate=59205.78/min [830000], rate=58245.61/min [840000], rate=57207.72/min [850000], rate=56478.41/min [860000], rate=55603.45/min [870000], rate=55121.44/min [880000], rate=55172.41/min [890000], rate=55279.50/min [900000], rate=54766.73/min [910000], rate=54274.35/min [920000], rate=53644.31/min [930000], rate=53602.31/min [940000], rate=53612.17/min [950000], rate=53773.58/min [960000], rate=53882.13/min [970000], rate=53938.83/min [980000], rate=54044.12/min [990000], rate=54098.36/min [1000000], rate=54200.54/min [1010000], rate=54301.08/min [1020000], rate=54400.00/min [1030000], rate=54497.35/min [1040000], rate=54545.45/min [1050000], rate=54687.50/min [1060000], rate=54827.59/min [1070000], rate=54965.75/min [1080000], rate=54961.83/min [1090000], rate=55096.88/min [1100000], rate=55183.95/min [1110000], rate=54859.97/min [1120000], rate=54324.98/min [1130000], rate=53937.95/min [1140000], rate=53521.13/min [1150000], rate=53405.57/min [1160000], rate=53538.46/min [1170000], rate=53710.79/min [1180000], rate=53922.32/min [1190000], rate=54131.92/min [1200000], rate=54339.62/min [1210000], rate=54545.45/min [1220000], rate=54831.46/min [1230000], rate=55074.63/min [1240000], rate=55029.59/min [1250000], rate=54664.72/min [1260000], rate=53352.15/min [1270000], rate=52263.37/min [1280000], rate=51131.82/min [1290000], rate=50129.53/min [1300000], rate=50000.00/min [1310000], rate=49968.21/min [1320000], rate=49874.06/min [1330000], rate=49812.73/min [1340000], rate=49752.48/min [1350000], rate=49723.76/min [1360000], rate=49695.49/min [1370000], rate=49697.70/min [1380000], rate=49699.88/min [1390000], rate=49731.66/min [1400000], rate=49180.33/min [1410000], rate=48592.76/min [1420000], rate=48081.26/min [1430000], rate=47666.67/min [1440000], rate=47161.57/min [1450000], rate=46749.06/min [1460000], rate=46422.89/min [1470000], rate=46129.71/min [1480000], rate=46010.36/min [1490000], rate=45964.01/min [1500000], rate=45801.53/min [1510000], rate=45504.77/min [1520000], rate=45283.02/min [1530000], rate=45066.27/min [1540000], rate=44789.14/min [1550000], rate=44711.54/min [1560000], rate=44592.66/min [1570000], rate=44454.93/min [1580000], rate=44257.70/min [1590000], rate=44003.69/min [1600000], rate=44016.51/min [1610000], rate=44089.46/min [1620000], rate=44181.82/min [1630000], rate=44253.39/min [1640000], rate=44364.29/min [1650000], rate=44454.42/min [1660000], rate=44543.83/min [1670000], rate=44572.95/min [1680000], rate=44621.51/min [1690000], rate=44689.29/min [1700000], rate=44756.47/min [1710000], rate=44842.66/min [1720000], rate=44947.74/min [1730000], rate=45052.08/min [1740000], rate=45155.71/min [1750000], rate=45278.14/min [1760000], rate=45419.35/min [1770000], rate=45559.85/min [1780000], rate=45680.07/min [1790000], rate=45819.11/min [1800000], rate=45937.90/min [1810000], rate=46075.52/min [1820000], rate=46212.44/min [1830000], rate=46348.67/min [1840000], rate=46484.21/min [1850000], rate=46638.66/min [1860000], rate=46772.84/min [1870000], rate=46906.35/min [1880000], rate=46882.79/min [1890000], rate=46801.49/min [1900000], rate=46971.57/min [1910000], rate=47179.91/min [1920000], rate=47368.42/min [1930000], rate=47323.25/min [1940000], rate=47317.07/min [1950000], rate=47291.84/min [1960000], rate=47285.89/min [1970000], rate=47298.92/min [1980000], rate=47349.54/min [1990000], rate=47063.46/min [2000000], rate=46385.78/min [2010000], rate=45751.14/min [2020000], rate=45207.01/min [2030000], rate=44762.95/min [2040000], rate=44363.90/min [2050000], rate=44165.17/min [2060000], rate=44032.78/min [2070000], rate=43949.04/min [2080000], rate=43866.43/min [2090000], rate=43815.51/min [2100000], rate=43659.04/min [2110000], rate=43267.26/min [2120000], rate=43235.89/min [2130000], rate=43204.87/min [2140000], rate=43188.70/min [2150000], rate=43230.56/min [2160000], rate=43257.68/min [2170000], rate=43270.19/min [2180000], rate=43182.57/min [2190000], rate=43124.38/min [2200000], rate=43123.16/min [2210000], rate=43150.02/min [2220000], rate=43176.66/min [2230000], rate=43091.79/min [2240000], rate=43118.38/min [2250000], rate=43158.57/min [2260000], rate=43198.47/min [2270000], rate=43265.57/min [2280000], rate=43318.56/min [2290000], rate=43384.91/min [2300000], rate=43437.20/min [2310000], rate=43489.17/min [2320000], rate=43554.44/min [2330000], rate=43619.34/min [2340000], rate=43697.48/min [2350000], rate=43788.82/min -building interval tree based on /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=150000.00/min [20000], rate=150000.00/min [30000], rate=120000.00/min [40000], rate=114285.71/min [50000], rate=136363.64/min [60000], rate=150000.00/min [70000], rate=150000.00/min [80000], rate=145454.55/min [90000], rate=138461.54/min [100000], rate=153846.15/min [110000], rate=153488.37/min [120000], rate=156521.74/min [130000], rate=159183.67/min [140000], rate=161538.46/min [150000], rate=166666.67/min [160000], rate=174545.45/min [170000], rate=185454.55/min [180000], rate=196363.64/min [190000], rate=203571.43/min [200000], rate=210526.32/min [210000], rate=206557.38/min [220000], rate=203076.92/min [230000], rate=202941.18/min [240000], rate=192000.00/min [250000], rate=182926.83/min [260000], rate=187951.81/min [270000], rate=190588.24/min [280000], rate=190909.09/min [290000], rate=187096.77/min [300000], rate=181818.18/min [310000], rate=187878.79/min [320000], rate=184615.38/min [330000], rate=185046.73/min [340000], rate=185454.55/min [350000], rate=184210.53/min [360000], rate=186206.90/min [370000], rate=189743.59/min [380000], rate=194871.79/min [390000], rate=198305.08/min [400000], rate=203389.83/min [410000], rate=206722.69/min [420000], rate=201600.00/min [430000], rate=201562.50/min [440000], rate=198496.24/min [450000], rate=191489.36/min [460000], rate=190344.83/min [470000], rate=193150.68/min [480000], rate=194594.59/min [490000], rate=193421.05/min [500000], rate=193548.39/min [510000], rate=190062.11/min [520000], rate=192592.59/min [530000], rate=192727.27/min [540000], rate=191715.98/min [550000], rate=188571.43/min [560000], rate=187709.50/min [570000], rate=190000.00/min [580000], rate=193333.33/min [590000], rate=191351.35/min [600000], rate=190476.19/min [610000], rate=189637.31/min [620000], rate=188832.49/min [630000], rate=183495.15/min [640000], rate=183732.06/min [650000], rate=184834.12/min [660000], rate=185915.49/min [670000], rate=186111.11/min [680000], rate=185454.55/min [690000], rate=184000.00/min [700000], rate=185840.71/min [710000], rate=185217.39/min [720000], rate=185407.73/min [730000], rate=186382.98/min [740000], rate=186554.62/min [750000], rate=188284.52/min [760000], rate=183870.97/min [770000], rate=166787.00/min [780000], rate=151456.31/min [790000], rate=140236.69/min [800000], rate=132596.69/min [810000], rate=125581.40/min [820000], rate=118840.58/min [830000], rate=108733.62/min [840000], rate=101612.90/min [850000], rate=96958.17/min [860000], rate=88659.79/min [870000], rate=80307.69/min [880000], rate=75753.23/min [890000], rate=74166.67/min [900000], rate=72192.51/min [910000], rate=69554.14/min [920000], rate=68064.12/min [930000], rate=66587.11/min [940000], rate=65051.90/min [950000], rate=62844.54/min [960000], rate=61604.28/min [970000], rate=60498.96/min [980000], rate=58045.41/min [990000], rate=56517.60/min [1000000], rate=56074.77/min [1010000], rate=55090.91/min [1020000], rate=53684.21/min [1030000], rate=52461.80/min [1040000], rate=51485.15/min [1050000], rate=50643.09/min [1060000], rate=49765.26/min [1070000], rate=48821.29/min [1080000], rate=48106.90/min [1090000], rate=47391.30/min [1100000], rate=46841.73/min [1110000], rate=46411.15/min [1120000], rate=46027.40/min [1130000], rate=45503.36/min [1140000], rate=45000.00/min [1150000], rate=44573.64/min [1160000], rate=44162.44/min [1170000], rate=43792.89/min [1180000], rate=43355.79/min [1190000], rate=42908.65/min [1200000], rate=42679.31/min [1210000], rate=42781.38/min [1220000], rate=42832.07/min [1230000], rate=42906.98/min [1240000], rate=42906.57/min [1250000], rate=43004.59/min [1260000], rate=43101.48/min [1270000], rate=43197.28/min [1280000], rate=43292.00/min [1290000], rate=43409.98/min [1300000], rate=43478.26/min [1310000], rate=43594.01/min [1320000], rate=43708.61/min [1330000], rate=43822.08/min [1340000], rate=43982.49/min [1350000], rate=44165.76/min [1360000], rate=44251.63/min [1370000], rate=44384.45/min [1380000], rate=44564.05/min [1390000], rate=44718.50/min [1400000], rate=44919.79/min [1410000], rate=45120.00/min [1420000], rate=45246.95/min [1430000], rate=45277.04/min [1440000], rate=45354.33/min [1450000], rate=45241.81/min [1460000], rate=45038.56/min [1470000], rate=44862.67/min [1480000], rate=44712.99/min [1490000], rate=44588.53/min [1500000], rate=44510.39/min [1510000], rate=44411.76/min [1520000], rate=44293.35/min [1530000], rate=44198.36/min [1540000], rate=44105.01/min [1550000], rate=44054.95/min [1560000], rate=44213.51/min [1570000], rate=44371.17/min [1580000], rate=44527.95/min [1590000], rate=44537.82/min [1600000], rate=44506.26/min [1610000], rate=44454.67/min [1620000], rate=44424.13/min [1630000], rate=44454.55/min [1640000], rate=44464.53/min [1650000], rate=44494.38/min [1660000], rate=44543.83/min [1670000], rate=44612.64/min [1680000], rate=44720.50/min [1690000], rate=44807.78/min [1700000], rate=44874.62/min [1710000], rate=44300.52/min [1720000], rate=43858.90/min [1730000], rate=43503.77/min [1740000], rate=43319.50/min [1750000], rate=43316.83/min [1760000], rate=43260.96/min [1770000], rate=43205.86/min [1780000], rate=43186.41/min [1790000], rate=43184.56/min [1800000], rate=43182.73/min [1810000], rate=43198.09/min [1820000], rate=43196.20/min [1830000], rate=43262.41/min [1840000], rate=43277.15/min [1850000], rate=43291.73/min [1860000], rate=43322.98/min [1870000], rate=43404.26/min [1880000], rate=43484.97/min [1890000], rate=43531.67/min [1900000], rate=43561.33/min [1910000], rate=43474.96/min [1920000], rate=43243.24/min [1930000], rate=43032.33/min [1940000], rate=42809.86/min [1950000], rate=42607.43/min [1960000], rate=42424.24/min [1970000], rate=42229.37/min [1980000], rate=42112.73/min [1990000], rate=42131.26/min [2000000], rate=42208.93/min [2010000], rate=42182.58/min [2020000], rate=42259.41/min [2030000], rate=42306.36/min [2040000], rate=42279.79/min [2050000], rate=42268.04/min [2060000], rate=42270.86/min [2070000], rate=42288.05/min [2080000], rate=42290.75/min [2090000], rate=42307.69/min [2100000], rate=42367.18/min [2110000], rate=42242.24/min [2120000], rate=41924.85/min [2130000], rate=41520.47/min [2140000], rate=41446.09/min [2150000], rate=41412.52/min [2160000], rate=41432.23/min [2170000], rate=41425.39/min [2180000], rate=41431.74/min [2190000], rate=41451.10/min [2200000], rate=41483.34/min [2210000], rate=41502.35/min [2220000], rate=41534.14/min [2230000], rate=41552.80/min [2240000], rate=41597.03/min [2250000], rate=41628.12/min [2260000], rate=41684.60/min [2270000], rate=41727.94/min [2280000], rate=41783.75/min [2290000], rate=41826.48/min [2300000], rate=41907.08/min [2310000], rate=41987.28/min [2320000], rate=42067.09/min [2330000], rate=42171.95/min [2340000], rate=42263.70/min [2350000], rate=42367.79/min [2360000], rate=42471.51/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir --filt_file /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 6000000.00 reads per min processed... 12000000.00 reads per min processed... 9000000.00 reads per min processed... 8000000.00 reads per min processed... 10000000.00 reads per min processed... 9000000.00 reads per min processed... 10500000.00 reads per min processed... 8000000.00 reads per min processed... 7714285.71 reads per min processed... 6666666.67 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5600000.00 reads per min processed... 5294117.65 reads per min processed... 5333333.33 reads per min processed... 5100000.00 reads per min processed... 5142857.14 reads per min processed... 4956521.74 reads per min processed... 5000000.00 reads per min processed... 4846153.85 reads per min processed... 4888888.89 reads per min processed... 4758620.69 reads per min processed... 4645161.29 reads per min processed... 4687500.00 reads per min processed... 4588235.29 reads per min processed... 4628571.43 reads per min processed... 4540540.54 reads per min processed... 4461538.46 reads per min processed... 4390243.90 reads per min processed... 4428571.43 reads per min processed... 4363636.36 reads per min processed... 4304347.83 reads per min processed... 4340425.53 reads per min processed... 4285714.29 reads per min processed... 4320000.00 reads per min processed... 4352941.18 reads per min processed... 4301886.79 reads per min processed... 4333333.33 reads per min processed... 4363636.36 reads per min processed... 4315789.47 reads per min processed... 4344827.59 reads per min processed... 4300000.00 reads per min processed... 4327868.85 reads per min processed... 4285714.29 reads per min processed... 4312500.00 reads per min processed... 4338461.54 reads per min processed... 4363636.36 reads per min processed... 4454545.45 reads per min processed... 4477611.94 reads per min processed... 4567164.18 reads per min processed... 4588235.29 reads per min processed... 4608695.65 reads per min processed... 4695652.17 reads per min processed... 4714285.71 reads per min processed... 4800000.00 reads per min processed... 4816901.41 reads per min processed... 4767123.29 reads per min processed... 4783783.78 reads per min processed... 4800000.00 reads per min processed... 4753246.75 reads per min processed... 4769230.77 reads per min processed... 4725000.00 reads per min processed... 4740740.74 reads per min processed... 4756097.56 reads per min processed... 4714285.71 reads per min processed... 4729411.76 reads per min processed... 4689655.17 reads per min processed... 4651685.39 reads per min processed... 4666666.67 reads per min processed... 4681318.68 reads per min processed... 4645161.29 reads per min processed... 4659574.47 reads per min processed... 4625000.00 reads per min processed... 4639175.26 reads per min processed... 4653061.22 reads per min processed... 4620000.00 reads per min processed... 4633663.37 reads per min processed... 4647058.82 reads per min processed... 4660194.17 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.sWlV38Bo0A/aih-tih-sc-9f6030-R1_A23WJ53LT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -236015.428674 EM: Round [1] log likelihood: -235847.234763 EM: Round [2] log likelihood: -235782.548439 EM: Round [3] log likelihood: -235751.472603 EM: Round [4] log likelihood: -235734.973985 EM: Round [5] log likelihood: -235725.723764 EM: Round [6] log likelihood: -235720.303469 EM: Round [7] log likelihood: -235716.982343 EM: Round [8] log likelihood: -235714.852635 EM: Round [9] log likelihood: -235713.425285 EM: Round [10] log likelihood: -235712.428804 EM: Round [11] log likelihood: -235711.707303 EM: Round [12] log likelihood: -235711.168011 EM: Round [13] log likelihood: -235710.753701 EM: Round [14] log likelihood: -235710.427823 EM: Round [15] log likelihood: -235710.166265 EM: Round [16] log likelihood: -235709.952640 EM: Round [17] log likelihood: -235709.775509 EM: Round [18] log likelihood: -235709.626696 EM: Round [19] log likelihood: -235709.500229 EM: Round [20] log likelihood: -235709.391663 EM: Round [21] log likelihood: -235709.297633 EM: Round [22] log likelihood: -235709.215549 EM: Round [23] log likelihood: -235709.143392 EM: Round [24] log likelihood: -235709.079565 EM: Round [25] log likelihood: -235709.022792 EM: Round [26] log likelihood: -235708.972038 EM: Round [27] log likelihood: -235708.926459 EM: Round [28] log likelihood: -235708.885360 EM: Round [29] log likelihood: -235708.848160 EM: Round [30] log likelihood: -235708.814374 EM: Round [31] log likelihood: -235708.783592 EM: Round [32] log likelihood: -235708.755465 EM: Round [33] log likelihood: -235708.729693 EM: Round [34] log likelihood: -235708.706022 EM: Round [35] log likelihood: -235708.684228 EM: Round [36] log likelihood: -235708.664120 EM: Round [37] log likelihood: -235708.645529 EM: Round [38] log likelihood: -235708.628308 EM: Round [39] log likelihood: -235708.612328 EM: Round [40] log likelihood: -235708.597474 EM: Round [41] log likelihood: -235708.583645 EM: Round [42] log likelihood: -235708.570752 EM: Round [43] log likelihood: -235708.558715 EM: Round [44] log likelihood: -235708.547461 EM: Round [45] log likelihood: -235708.536928 EM: Round [46] log likelihood: -235708.527057 EM: Round [47] log likelihood: -235708.517797 EM: Round [48] log likelihood: -235708.509100 EM: Round [49] log likelihood: -235708.500926 EM: Round [50] log likelihood: -235708.493234 EM: Round [51] log likelihood: -235708.485992 EM: Round [52] log likelihood: -235708.479165 EM: Round [53] log likelihood: -235708.472727 EM: Round [54] log likelihood: -235708.466650 EM: Round [55] log likelihood: -235708.460910 EM: Round [56] log likelihood: -235708.455485 EM: Round [57] log likelihood: -235708.450354 EM: Round [58] log likelihood: -235708.445498 EM: Round [59] log likelihood: -235708.440901 EM: Round [60] log likelihood: -235708.436545 EM: Round [61] log likelihood: -235708.432417 EM: Round [62] log likelihood: -235708.428503 EM: Round [63] log likelihood: -235708.424789 EM: Round [64] log likelihood: -235708.421264 EM: Round [65] log likelihood: -235708.417918 EM: Round [66] log likelihood: -235708.414739 EM: Round [67] log likelihood: -235708.411718 EM: Round [68] log likelihood: -235708.408846 EM: Round [69] log likelihood: -235708.406116 EM: Round [70] log likelihood: -235708.403519 EM: Round [71] log likelihood: -235708.401047 EM: Round [72] log likelihood: -235708.398695 EM: Round [73] log likelihood: -235708.396456 EM: Round [74] log likelihood: -235708.394323 EM: Round [75] log likelihood: -235708.392292 EM: Round [76] log likelihood: -235708.390356 EM: Round [77] log likelihood: -235708.388512 EM: Round [78] log likelihood: -235708.386753 EM: Round [79] log likelihood: -235708.385077 EM: Round [80] log likelihood: -235708.383478 EM: Round [81] log likelihood: -235708.381953 EM: Round [82] log likelihood: -235708.380498 EM: Round [83] log likelihood: -235708.379109 EM: Round [84] log likelihood: -235708.377784 EM: Round [85] log likelihood: -235708.376520 EM: Round [86] log likelihood: -235708.375312 EM: Round [87] log likelihood: -235708.374159 EM: Round [88] log likelihood: -235708.373058 EM: Round [89] log likelihood: -235708.372006 EM: Round [90] log likelihood: -235708.371001 EM: Round [91] log likelihood: -235708.370041 EM: Round [92] log likelihood: -235708.369123 EM: Round [93] log likelihood: -235708.368246 EM: Round [94] log likelihood: -235708.367408 EM: Round [95] log likelihood: -235708.366607 EM: Round [96] log likelihood: -235708.365841 EM: Round [97] log likelihood: -235708.365108 EM: Round [98] log likelihood: -235708.364407 EM: Round [99] log likelihood: -235708.363737 EM: Round [100] log likelihood: -235708.363097 EM: Round [101] log likelihood: -235708.362483 EM: Round [102] log likelihood: -235708.361897 EM: Round [103] log likelihood: -235708.361335 EM: Round [104] log likelihood: -235708.360798 EM: Round [105] log likelihood: -235708.360284 EM: Round [106] log likelihood: -235708.359792 EM: Round [107] log likelihood: -235708.359321 EM: Round [108] log likelihood: -235708.358870 EM: Round [109] log likelihood: -235708.358439 EM: Round [110] log likelihood: -235708.358025 EM: Round [111] log likelihood: -235708.357630 EM: Round [112] log likelihood: -235708.357251 EM: Round [113] log likelihood: -235708.356887 EM: Round [114] log likelihood: -235708.356540 EM: Round [115] log likelihood: -235708.356207 EM: Round [116] log likelihood: -235708.355888 EM: Round [117] log likelihood: -235708.355582 EM: Round [118] log likelihood: -235708.355289 EM: Round [119] log likelihood: -235708.355008 EM: Round [120] log likelihood: -235708.354739 EM: Round [121] log likelihood: -235708.354481 EM: Round [122] log likelihood: -235708.354234 EM: Round [123] log likelihood: -235708.353997 EM: Round [124] log likelihood: -235708.353770 EM: Round [125] log likelihood: -235708.353553 EM: Round [126] log likelihood: -235708.353344 EM: Round [127] log likelihood: -235708.353144 EM: Round [128] log likelihood: -235708.352952 EM: Round [129] log likelihood: -235708.352768 EM: Round [130] log likelihood: -235708.352591 EM: Round [131] log likelihood: -235708.352422 EM: Round [132] log likelihood: -235708.352260 EM: Round [133] log likelihood: -235708.352104 EM: Round [134] log likelihood: -235708.351955 EM: Round [135] log likelihood: -235708.351811 EM: Round [136] log likelihood: -235708.351674 EM: Round [137] log likelihood: -235708.351542 EM: Round [138] log likelihood: -235708.351415 EM: Round [139] log likelihood: -235708.351293 EM: Round [140] log likelihood: -235708.351177 EM: Round [141] log likelihood: -235708.351065 EM: Round [142] log likelihood: -235708.350957 EM: Round [143] log likelihood: -235708.350854 EM: Round [144] log likelihood: -235708.350755 EM: Stopping iterations at round 144 due to insufficient improvement in likelihood. EM: Starting log likelihood: -235829.936360 EM: Round [1] log likelihood: -235677.954640 EM: Round [2] log likelihood: -235621.113297 EM: Round [3] log likelihood: -235594.596302 EM: Round [4] log likelihood: -235580.861710 EM: Round [5] log likelihood: -235573.296206 EM: Round [6] log likelihood: -235568.916835 EM: Round [7] log likelihood: -235566.257773 EM: Round [8] log likelihood: -235564.565699 EM: Round [9] log likelihood: -235563.439798 EM: Round [10] log likelihood: -235562.659281 EM: Round [11] log likelihood: -235562.098040 EM: Round [12] log likelihood: -235561.681335 EM: Round [13] log likelihood: -235561.363233 EM: Round [14] log likelihood: -235561.114505 EM: Round [15] log likelihood: -235560.915941 EM: Round [16] log likelihood: -235560.754535 EM: Round [17] log likelihood: -235560.621244 EM: Round [18] log likelihood: -235560.509635 EM: Round [19] log likelihood: -235560.415026 EM: Round [20] log likelihood: -235560.333951 EM: Round [21] log likelihood: -235560.263799 EM: Round [22] log likelihood: -235560.202572 EM: Round [23] log likelihood: -235560.148718 EM: Round [24] log likelihood: -235560.101021 EM: Round [25] log likelihood: -235560.058510 EM: Round [26] log likelihood: -235560.020408 EM: Round [27] log likelihood: -235559.986083 EM: Round [28] log likelihood: -235559.955016 EM: Round [29] log likelihood: -235559.926780 EM: Round [30] log likelihood: -235559.901018 EM: Round [31] log likelihood: -235559.877430 EM: Round [32] log likelihood: -235559.855764 EM: Round [33] log likelihood: -235559.835805 EM: Round [34] log likelihood: -235559.817368 EM: Round [35] log likelihood: -235559.800296 EM: Round [36] log likelihood: -235559.784452 EM: Round [37] log likelihood: -235559.769716 EM: Round [38] log likelihood: -235559.755985 EM: Round [39] log likelihood: -235559.743167 EM: Round [40] log likelihood: -235559.731183 EM: Round [41] log likelihood: -235559.719961 EM: Round [42] log likelihood: -235559.709438 EM: Round [43] log likelihood: -235559.699559 EM: Round [44] log likelihood: -235559.690273 EM: Round [45] log likelihood: -235559.681534 EM: Round [46] log likelihood: -235559.673303 EM: Round [47] log likelihood: -235559.665543 EM: Round [48] log likelihood: -235559.658220 EM: Round [49] log likelihood: -235559.651305 EM: Round [50] log likelihood: -235559.644770 EM: Round [51] log likelihood: -235559.638589 EM: Round [52] log likelihood: -235559.632740 EM: Round [53] log likelihood: -235559.627203 EM: Round [54] log likelihood: -235559.621957 EM: Round [55] log likelihood: -235559.616984 EM: Round [56] log likelihood: -235559.612268 EM: Round [57] log likelihood: -235559.607795 EM: Round [58] log likelihood: -235559.603549 EM: Round [59] log likelihood: -235559.599518 EM: Round [60] log likelihood: -235559.595689 EM: Round [61] log likelihood: -235559.592051 EM: Round [62] log likelihood: -235559.588593 EM: Round [63] log likelihood: -235559.585306 EM: Round [64] log likelihood: -235559.582180 EM: Round [65] log likelihood: -235559.579207 EM: Round [66] log likelihood: -235559.576377 EM: Round [67] log likelihood: -235559.573685 EM: Round [68] log likelihood: -235559.571122 EM: Round [69] log likelihood: -235559.568683 EM: Round [70] log likelihood: -235559.566359 EM: Round [71] log likelihood: -235559.564146 EM: Round [72] log likelihood: -235559.562038 EM: Round [73] log likelihood: -235559.560030 EM: Round [74] log likelihood: -235559.558116 EM: Round [75] log likelihood: -235559.556292 EM: Round [76] log likelihood: -235559.554553 EM: Round [77] log likelihood: -235559.552895 EM: Round [78] log likelihood: -235559.551315 EM: Round [79] log likelihood: -235559.549808 EM: Round [80] log likelihood: -235559.548370 EM: Round [81] log likelihood: -235559.546999 EM: Round [82] log likelihood: -235559.545691 EM: Round [83] log likelihood: -235559.544444 EM: Round [84] log likelihood: -235559.543253 EM: Round [85] log likelihood: -235559.542117 EM: Round [86] log likelihood: -235559.541033 EM: Round [87] log likelihood: -235559.539998 EM: Round [88] log likelihood: -235559.539011 EM: Round [89] log likelihood: -235559.538068 EM: Round [90] log likelihood: -235559.537168 EM: Round [91] log likelihood: -235559.536308 EM: Round [92] log likelihood: -235559.535488 EM: Round [93] log likelihood: -235559.534704 EM: Round [94] log likelihood: -235559.533956 EM: Round [95] log likelihood: -235559.533241 EM: Round [96] log likelihood: -235559.532559 EM: Round [97] log likelihood: -235559.531907 EM: Round [98] log likelihood: -235559.531284 EM: Round [99] log likelihood: -235559.530689 EM: Round [100] log likelihood: -235559.530120 EM: Round [101] log likelihood: -235559.529577 EM: Round [102] log likelihood: -235559.529058 EM: Round [103] log likelihood: -235559.528562 EM: Round [104] log likelihood: -235559.528088 EM: Round [105] log likelihood: -235559.527635 EM: Round [106] log likelihood: -235559.527202 EM: Round [107] log likelihood: -235559.526788 EM: Round [108] log likelihood: -235559.526392 EM: Round [109] log likelihood: -235559.526014 EM: Round [110] log likelihood: -235559.525653 EM: Round [111] log likelihood: -235559.525307 EM: Round [112] log likelihood: -235559.524976 EM: Round [113] log likelihood: -235559.524660 EM: Round [114] log likelihood: -235559.524358 EM: Round [115] log likelihood: -235559.524069 EM: Round [116] log likelihood: -235559.523793 EM: Round [117] log likelihood: -235559.523528 EM: Round [118] log likelihood: -235559.523276 EM: Round [119] log likelihood: -235559.523034 EM: Round [120] log likelihood: -235559.522802 EM: Round [121] log likelihood: -235559.522581 EM: Round [122] log likelihood: -235559.522369 EM: Round [123] log likelihood: -235559.522167 EM: Round [124] log likelihood: -235559.521973 EM: Round [125] log likelihood: -235559.521787 EM: Round [126] log likelihood: -235559.521610 EM: Round [127] log likelihood: -235559.521440 EM: Round [128] log likelihood: -235559.521278 EM: Round [129] log likelihood: -235559.521122 EM: Round [130] log likelihood: -235559.520973 EM: Round [131] log likelihood: -235559.520831 EM: Round [132] log likelihood: -235559.520694 EM: Round [133] log likelihood: -235559.520563 EM: Round [134] log likelihood: -235559.520438 EM: Round [135] log likelihood: -235559.520319 EM: Round [136] log likelihood: -235559.520204 EM: Round [137] log likelihood: -235559.520094 EM: Round [138] log likelihood: -235559.519989 EM: Round [139] log likelihood: -235559.519889 EM: Round [140] log likelihood: -235559.519792 EM: Stopping iterations at round 140 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 262696538 > /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir > /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir --annotate /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir -done, see /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 1718, filtered: 10982) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.sWlV38Bo0A/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.sWlV38Bo0A/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000174384.9] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000243753.5] WARNING, no entry stored in dbm for [ENSG00000181126.13] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287721.1] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000203413.3] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000236051.7] WARNING, no entry stored in dbm for [ENSG00000186704.9] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000128438.10] WARNING, no entry stored in dbm for [ENSG00000229891.2] WARNING, no entry stored in dbm for [ENSG00000241104.5] WARNING, no entry stored in dbm for [ENSG00000226310.1] WARNING, no entry stored in dbm for [ENSG00000250241.6] WARNING, no entry stored in dbm for [ENSG00000229498.1] WARNING, no entry stored in dbm for [ENSG00000225594.1] WARNING, no entry stored in dbm for [ENSG00000247498.10] WARNING, no entry stored in dbm for [ENSG00000225689.2] WARNING, no entry stored in dbm for [ENSG00000241361.8] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000250351.1] WARNING, no entry stored in dbm for [ENSG00000235544.1] WARNING, no entry stored in dbm for [ENSG00000184139.8] WARNING, no entry stored in dbm for [ENSG00000215869.4] WARNING, no entry stored in dbm for [ENSG00000287744.1] WARNING, no entry stored in dbm for [ENSG00000254681.6] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000276735.1] WARNING, no entry stored in dbm for [ENSG00000214248.2] WARNING, no entry stored in dbm for [ENSG00000244128.7] WARNING, no entry stored in dbm for [ENSG00000100068.14] WARNING, no entry stored in dbm for [ENSG00000257219.6] WARNING, no entry stored in dbm for [ENSG00000267779.7] WARNING, no entry stored in dbm for [ENSG00000214076.3] WARNING, no entry stored in dbm for [ENSG00000200875.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000198237.8] WARNING, no entry stored in dbm for [ENSG00000263740.2] WARNING, no entry stored in dbm for [ENSG00000240216.7] WARNING, no entry stored in dbm for [ENSG00000215386.13] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000282885.2] WARNING, no entry stored in dbm for [ENSG00000228980.4] WARNING, no entry stored in dbm for [ENSG00000179406.8] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000288543.1] WARNING, no entry stored in dbm for [ENSG00000224216.1] WARNING, no entry stored in dbm for [ENSG00000286535.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000238035.8] WARNING, no entry stored in dbm for [ENSG00000286182.1] WARNING, no entry stored in dbm for [ENSG00000287320.1] WARNING, no entry stored in dbm for [ENSG00000260236.1] WARNING, no entry stored in dbm for [ENSG00000251378.1] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000222043.2] WARNING, no entry stored in dbm for [ENSG00000230551.4] WARNING, no entry stored in dbm for [ENSG00000234537.1] WARNING, no entry stored in dbm for [ENSG00000238045.9] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000228204.2] WARNING, no entry stored in dbm for [ENSG00000237004.4] WARNING, no entry stored in dbm for [ENSG00000231952.3] WARNING, no entry stored in dbm for [ENSG00000236491.1] WARNING, no entry stored in dbm for [ENSG00000216663.3] WARNING, no entry stored in dbm for [ENSG00000234420.7] WARNING, no entry stored in dbm for [ENSG00000253181.2] WARNING, no entry stored in dbm for [ENSG00000279491.1] WARNING, no entry stored in dbm for [ENSG00000274024.1] WARNING, no entry stored in dbm for [ENSG00000234261.4] WARNING, no entry stored in dbm for [ENSG00000286933.1] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000214425.8] WARNING, no entry stored in dbm for [ENSG00000228293.1] WARNING, no entry stored in dbm for [ENSG00000253438.4] WARNING, no entry stored in dbm for [ENSG00000228775.8] WARNING, no entry stored in dbm for [ENSG00000249072.1] WARNING, no entry stored in dbm for [ENSG00000273674.5] WARNING, no entry stored in dbm for [ENSG00000229839.6] WARNING, no entry stored in dbm for [ENSG00000185596.16] WARNING, no entry stored in dbm for [ENSG00000185596.16] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000189136.9] WARNING, no entry stored in dbm for [ENSG00000232642.2] WARNING, no entry stored in dbm for [ENSG00000248866.1] WARNING, no entry stored in dbm for [ENSG00000272321.1] WARNING, no entry stored in dbm for [ENSG00000240661.3] WARNING, no entry stored in dbm for [ENSG00000278591.1] WARNING, no entry stored in dbm for [ENSG00000275219.1] WARNING, no entry stored in dbm for [ENSG00000274062.1] WARNING, no entry stored in dbm for [ENSG00000274862.1] WARNING, no entry stored in dbm for [ENSG00000278774.1] WARNING, no entry stored in dbm for [ENSG00000277903.1] WARNING, no entry stored in dbm for [ENSG00000276596.1] WARNING, no entry stored in dbm for [ENSG00000278048.1] WARNING, no entry stored in dbm for [ENSG00000274432.1] WARNING, no entry stored in dbm for [ENSG00000273709.1] WARNING, no entry stored in dbm for [ENSG00000275616.1] WARNING, no entry stored in dbm for [ENSG00000214796.8] WARNING, no entry stored in dbm for [ENSG00000254369.6] WARNING, no entry stored in dbm for [ENSG00000227398.4] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000253434.8] WARNING, no entry stored in dbm for [ENSG00000232894.1] WARNING, no entry stored in dbm for [ENSG00000238258.1] WARNING, no entry stored in dbm for [ENSG00000259216.2] WARNING, no entry stored in dbm for [ENSG00000233712.1] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000241316.8] WARNING, no entry stored in dbm for [ENSG00000287872.1] WARNING, no entry stored in dbm for [ENSG00000186704.9] WARNING, no entry stored in dbm for [ENSG00000251459.2] WARNING, no entry stored in dbm for [ENSG00000269821.1] WARNING, no entry stored in dbm for [ENSG00000277211.1] WARNING, no entry stored in dbm for [ENSG00000233016.7] WARNING, no entry stored in dbm for [ENSG00000254418.1] WARNING, no entry stored in dbm for [ENSG00000240350.3] WARNING, no entry stored in dbm for [ENSG00000206120.11] WARNING, no entry stored in dbm for [ENSG00000251676.2] WARNING, no entry stored in dbm for [ENSG00000223705.9] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000185485.14] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000272880.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000228111.1] WARNING, no entry stored in dbm for [ENSG00000237298.10] WARNING, no entry stored in dbm for [ENSG00000259216.2] WARNING, no entry stored in dbm for [ENSG00000234884.2] WARNING, no entry stored in dbm for [ENSG00000232884.9] WARNING, no entry stored in dbm for [ENSG00000237149.5] WARNING, no entry stored in dbm for [ENSG00000224523.1] WARNING, no entry stored in dbm for [ENSG00000226200.7] WARNING, no entry stored in dbm for [ENSG00000271382.1] WARNING, no entry stored in dbm for [ENSG00000286668.1] WARNING, no entry stored in dbm for [ENSG00000200156.1] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000281501.1] WARNING, no entry stored in dbm for [ENSG00000287483.1] WARNING, no entry stored in dbm for [ENSG00000250416.2] WARNING, no entry stored in dbm for [ENSG00000234684.7] WARNING, no entry stored in dbm for [ENSG00000247556.6] WARNING, no entry stored in dbm for [ENSG00000224897.8] WARNING, no entry stored in dbm for [ENSG00000251441.3] WARNING, no entry stored in dbm for [ENSG00000238086.5] WARNING, no entry stored in dbm for [ENSG00000236204.6] WARNING, no entry stored in dbm for [ENSG00000218048.2] WARNING, no entry stored in dbm for [ENSG00000249684.6] WARNING, no entry stored in dbm for [ENSG00000233836.7] WARNING, no entry stored in dbm for [ENSG00000240992.1] WARNING, no entry stored in dbm for [ENSG00000228848.3] WARNING, no entry stored in dbm for [ENSG00000231449.1] WARNING, no entry stored in dbm for [ENSG00000228568.1] WARNING, no entry stored in dbm for [ENSG00000239780.1] WARNING, no entry stored in dbm for [ENSG00000223671.2] WARNING, no entry stored in dbm for [ENSG00000255286.2] WARNING, no entry stored in dbm for [ENSG00000239671.1] WARNING, no entry stored in dbm for [ENSG00000231788.4] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000260737.6] WARNING, no entry stored in dbm for [ENSG00000206975.1] WARNING, no entry stored in dbm for [ENSG00000199849.1] WARNING, no entry stored in dbm for [ENSG00000274585.1] WARNING, no entry stored in dbm for [ENSG00000224011.1] WARNING, no entry stored in dbm for [ENSG00000264092.2] WARNING, no entry stored in dbm for [ENSG00000241785.3] WARNING, no entry stored in dbm for [ENSG00000242999.3] WARNING, no entry stored in dbm for [ENSG00000218048.2] WARNING, no entry stored in dbm for [ENSG00000254040.2] WARNING, no entry stored in dbm for [ENSG00000259516.2] WARNING, no entry stored in dbm for [ENSG00000229992.1] WARNING, no entry stored in dbm for [ENSG00000287236.1] WARNING, no entry stored in dbm for [ENSG00000260361.1] WARNING, no entry stored in dbm for [ENSG00000269386.5] WARNING, no entry stored in dbm for [ENSG00000282572.2] WARNING, no entry stored in dbm for [ENSG00000249830.1] WARNING, no entry stored in dbm for [ENSG00000254842.6] WARNING, no entry stored in dbm for [ENSG00000286348.1] WARNING, no entry stored in dbm for [ENSG00000248927.1] WARNING, no entry stored in dbm for [ENSG00000283602.1] WARNING, no entry stored in dbm for [ENSG00000205771.6] WARNING, no entry stored in dbm for [ENSG00000124224.17] WARNING, no entry stored in dbm for [ENSG00000235431.2] WARNING, no entry stored in dbm for [ENSG00000205771.6] WARNING, no entry stored in dbm for [ENSG00000067601.8] WARNING, no entry stored in dbm for [ENSG00000272655.2] WARNING, no entry stored in dbm for [ENSG00000237468.2] WARNING, no entry stored in dbm for [ENSG00000244953.1] WARNING, no entry stored in dbm for [ENSG00000127957.18] WARNING, no entry stored in dbm for [ENSG00000264107.1] WARNING, no entry stored in dbm for [ENSG00000279110.1] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000224429.8] WARNING, no entry stored in dbm for [ENSG00000287643.1] WARNING, no entry stored in dbm for [ENSG00000255185.6] WARNING, no entry stored in dbm for [ENSG00000258057.6] WARNING, no entry stored in dbm for [ENSG00000259925.1] WARNING, no entry stored in dbm for [ENSG00000251182.2] WARNING, no entry stored in dbm for [ENSG00000179818.14] WARNING, no entry stored in dbm for [ENSG00000189223.15] WARNING, no entry stored in dbm for [ENSG00000215546.2] WARNING, no entry stored in dbm for [ENSG00000258162.4] WARNING, no entry stored in dbm for [ENSG00000170356.9] WARNING, no entry stored in dbm for [ENSG00000240288.8] WARNING, no entry stored in dbm for [ENSG00000229873.1] WARNING, no entry stored in dbm for [ENSG00000287611.1] WARNING, no entry stored in dbm for [ENSG00000226328.7] WARNING, no entry stored in dbm for [ENSG00000213376.4] WARNING, no entry stored in dbm for [ENSG00000249673.7] WARNING, no entry stored in dbm for [ENSG00000214425.8] WARNING, no entry stored in dbm for [ENSG00000088340.17] WARNING, no entry stored in dbm for [ENSG00000198496.12] WARNING, no entry stored in dbm for [ENSG00000262879.6] WARNING, no entry stored in dbm for [ENSG00000203825.4] WARNING, no entry stored in dbm for [ENSG00000203825.4] WARNING, no entry stored in dbm for [ENSG00000203825.4] WARNING, no entry stored in dbm for [ENSG00000203825.4] WARNING, no entry stored in dbm for [ENSG00000203825.4] WARNING, no entry stored in dbm for [ENSG00000223361.5] WARNING, no entry stored in dbm for [ENSG00000227632.2] WARNING, no entry stored in dbm for [ENSG00000259820.1] WARNING, no entry stored in dbm for [ENSG00000228323.2] WARNING, no entry stored in dbm for [ENSG00000226200.7] WARNING, no entry stored in dbm for [ENSG00000253795.1] WARNING, no entry stored in dbm for [ENSG00000232551.2] WARNING, no entry stored in dbm for [ENSG00000205360.6] WARNING, no entry stored in dbm for [ENSG00000275449.1] WARNING, no entry stored in dbm for [ENSG00000234769.7] WARNING, no entry stored in dbm for [ENSG00000283805.1] WARNING, no entry stored in dbm for [ENSG00000203709.12] WARNING, no entry stored in dbm for [ENSG00000230937.12] WARNING, no entry stored in dbm for [ENSG00000233325.3] WARNING, no entry stored in dbm for [ENSG00000283240.1] WARNING, no entry stored in dbm for [ENSG00000283240.1] WARNING, no entry stored in dbm for [ENSG00000287485.1] WARNING, no entry stored in dbm for [ENSG00000249898.8] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000251508.1] WARNING, no entry stored in dbm for [ENSG00000254934.5] WARNING, no entry stored in dbm for [ENSG00000288598.2] WARNING, no entry stored in dbm for [ENSG00000267278.6] WARNING, no entry stored in dbm for [ENSG00000248973.3] WARNING, no entry stored in dbm for [ENSG00000253223.1] WARNING, no entry stored in dbm for [ENSG00000248323.7] WARNING, no entry stored in dbm for [ENSG00000248323.7] WARNING, no entry stored in dbm for [ENSG00000224888.4] WARNING, no entry stored in dbm for [ENSG00000281560.1] WARNING, no entry stored in dbm for [ENSG00000240429.1] WARNING, no entry stored in dbm for [ENSG00000237588.2] WARNING, no entry stored in dbm for [ENSG00000100068.14] WARNING, no entry stored in dbm for [ENSG00000224072.1] WARNING, no entry stored in dbm for [ENSG00000249072.1] WARNING, no entry stored in dbm for [ENSG00000256751.6] WARNING, no entry stored in dbm for [ENSG00000232527.8] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000234476.3] WARNING, no entry stored in dbm for [ENSG00000248238.2] WARNING, no entry stored in dbm for [ENSG00000261064.1] WARNING, no entry stored in dbm for [ENSG00000277561.5] WARNING, no entry stored in dbm for [ENSG00000254689.3] WARNING, no entry stored in dbm for [ENSG00000254101.7] WARNING, no entry stored in dbm for [ENSG00000239454.1] WARNING, no entry stored in dbm for [ENSG00000280721.1] WARNING, no entry stored in dbm for [ENSG00000266913.1] WARNING, no entry stored in dbm for [ENSG00000232100.1] WARNING, no entry stored in dbm for [ENSG00000225564.6] WARNING, no entry stored in dbm for [ENSG00000228794.10] WARNING, no entry stored in dbm for [ENSG00000277147.6] WARNING, no entry stored in dbm for [ENSG00000233208.6] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000224405.1] WARNING, no entry stored in dbm for [ENSG00000232117.2] WARNING, no entry stored in dbm for [ENSG00000232803.1] WARNING, no entry stored in dbm for [ENSG00000226620.8] WARNING, no entry stored in dbm for [ENSG00000227764.2] WARNING, no entry stored in dbm for [ENSG00000215835.2] WARNING, no entry stored in dbm for [ENSG00000233609.3] WARNING, no entry stored in dbm for [ENSG00000214110.3] WARNING, no entry stored in dbm for [ENSG00000212589.1] WARNING, no entry stored in dbm for [ENSG00000257167.2] WARNING, no entry stored in dbm for [ENSG00000243176.6] WARNING, no entry stored in dbm for [ENSG00000287929.1] WARNING, no entry stored in dbm for [ENSG00000234102.1] WARNING, no entry stored in dbm for [ENSG00000229222.1] WARNING, no entry stored in dbm for [ENSG00000226145.7] WARNING, no entry stored in dbm for [ENSG00000256852.1] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000233652.1] WARNING, no entry stored in dbm for [ENSG00000253218.1] WARNING, no entry stored in dbm for [ENSG00000236816.3] WARNING, no entry stored in dbm for [ENSG00000224927.2] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000216657.1] WARNING, no entry stored in dbm for [ENSG00000236778.8] WARNING, no entry stored in dbm for [ENSG00000286675.1] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000237424.1] WARNING, no entry stored in dbm for [ENSG00000253138.5] WARNING, no entry stored in dbm for [ENSG00000276975.3] WARNING, no entry stored in dbm for [ENSG00000182841.12] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000237380.7] WARNING, no entry stored in dbm for [ENSG00000251557.2] WARNING, no entry stored in dbm for [ENSG00000215492.6] WARNING, no entry stored in dbm for [ENSG00000226188.2] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000276550.4] WARNING, no entry stored in dbm for [ENSG00000278970.2] WARNING, no entry stored in dbm for [ENSG00000240809.1] WARNING, no entry stored in dbm for [ENSG00000258888.1] WARNING, no entry stored in dbm for [ENSG00000227725.3] WARNING, no entry stored in dbm for [ENSG00000286049.1] WARNING, no entry stored in dbm for [ENSG00000277561.5] WARNING, no entry stored in dbm for [ENSG00000244952.2] WARNING, no entry stored in dbm for [ENSG00000239533.6] WARNING, no entry stored in dbm for [ENSG00000250903.9] WARNING, no entry stored in dbm for [ENSG00000257915.1] WARNING, no entry stored in dbm for [ENSG00000250959.2] WARNING, no entry stored in dbm for [ENSG00000196295.12] WARNING, no entry stored in dbm for [ENSG00000232392.1] WARNING, no entry stored in dbm for [ENSG00000262879.6] WARNING, no entry stored in dbm for [ENSG00000164845.16] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000233980.1] WARNING, no entry stored in dbm for [ENSG00000248290.1] WARNING, no entry stored in dbm for [ENSG00000275625.1] WARNING, no entry stored in dbm for [ENSG00000173295.8] WARNING, no entry stored in dbm for [ENSG00000205847.6] WARNING, no entry stored in dbm for [ENSG00000173295.8] WARNING, no entry stored in dbm for [ENSG00000244699.1] WARNING, no entry stored in dbm for [ENSG00000226777.7] WARNING, no entry stored in dbm for [ENSG00000261240.1] WARNING, no entry stored in dbm for [ENSG00000250343.1] WARNING, no entry stored in dbm for [ENSG00000264546.1] WARNING, no entry stored in dbm for [ENSG00000228868.3] WARNING, no entry stored in dbm for [ENSG00000231231.5] WARNING, no entry stored in dbm for [ENSG00000286046.1] WARNING, no entry stored in dbm for [ENSG00000276960.1] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000186704.9] WARNING, no entry stored in dbm for [ENSG00000230366.9] WARNING, no entry stored in dbm for [ENSG00000229358.3] WARNING, no entry stored in dbm for [ENSG00000183784.7] WARNING, no entry stored in dbm for [ENSG00000231793.5] WARNING, no entry stored in dbm for [ENSG00000239219.2] WARNING, no entry stored in dbm for [ENSG00000254275.6] WARNING, no entry stored in dbm for [ENSG00000260689.2] WARNING, no entry stored in dbm for [ENSG00000233178.7] WARNING, no entry stored in dbm for [ENSG00000265802.2] WARNING, no entry stored in dbm for [ENSG00000287962.1] WARNING, no entry stored in dbm for [ENSG00000232679.2] WARNING, no entry stored in dbm for [ENSG00000222041.11] WARNING, no entry stored in dbm for [ENSG00000229807.12] WARNING, no entry stored in dbm for [ENSG00000259343.7] WARNING, no entry stored in dbm for [ENSG00000233937.7] WARNING, no entry stored in dbm for [ENSG00000187172.15] WARNING, no entry stored in dbm for [ENSG00000233937.7] WARNING, no entry stored in dbm for [ENSG00000248103.1] WARNING, no entry stored in dbm for [ENSG00000239920.2] WARNING, no entry stored in dbm for [ENSG00000279851.2] WARNING, no entry stored in dbm for [ENSG00000270533.2] WARNING, no entry stored in dbm for [ENSG00000231252.3] WARNING, no entry stored in dbm for [ENSG00000234929.2] WARNING, no entry stored in dbm for [ENSG00000235142.10] WARNING, no entry stored in dbm for [ENSG00000226791.7] WARNING, no entry stored in dbm for [ENSG00000287495.1] WARNING, no entry stored in dbm for [ENSG00000223559.1] WARNING, no entry stored in dbm for [ENSG00000267419.2] WARNING, no entry stored in dbm for [ENSG00000259376.1] WARNING, no entry stored in dbm for [ENSG00000197847.12] WARNING, no entry stored in dbm for [ENSG00000279175.1] WARNING, no entry stored in dbm for [ENSG00000230155.6] WARNING, no entry stored in dbm for [ENSG00000240875.6] WARNING, no entry stored in dbm for [ENSG00000225964.6] WARNING, no entry stored in dbm for [ENSG00000228775.8] WARNING, no entry stored in dbm for [ENSG00000226800.5] WARNING, no entry stored in dbm for [ENSG00000287225.1] WARNING, no entry stored in dbm for [ENSG00000260882.1] WARNING, no entry stored in dbm for [ENSG00000287768.1] WARNING, no entry stored in dbm for [ENSG00000254811.5] WARNING, no entry stored in dbm for [ENSG00000260037.5] WARNING, no entry stored in dbm for [ENSG00000263647.1] WARNING, no entry stored in dbm for [ENSG00000229956.11] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000266993.3] WARNING, no entry stored in dbm for [ENSG00000233967.7] WARNING, no entry stored in dbm for [ENSG00000249816.7] WARNING, no entry stored in dbm for [ENSG00000213247.3] WARNING, no entry stored in dbm for [ENSG00000198221.10] WARNING, no entry stored in dbm for [ENSG00000237224.4] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000266913.1] WARNING, no entry stored in dbm for [ENSG00000214198.8] WARNING, no entry stored in dbm for [ENSG00000239415.1] WARNING, no entry stored in dbm for [ENSG00000255479.1] WARNING, no entry stored in dbm for [ENSG00000254855.1] WARNING, no entry stored in dbm for [ENSG00000245156.1] WARNING, no entry stored in dbm for [ENSG00000256035.1] WARNING, no entry stored in dbm for [ENSG00000283633.1] WARNING, no entry stored in dbm for [ENSG00000272578.5] WARNING, no entry stored in dbm for [ENSG00000244723.3] WARNING, no entry stored in dbm for [ENSG00000243095.1] WARNING, no entry stored in dbm for [ENSG00000261019.1] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000267302.5] WARNING, no entry stored in dbm for [ENSG00000241621.1] WARNING, no entry stored in dbm for [ENSG00000241621.1] WARNING, no entry stored in dbm for [ENSG00000285799.1] WARNING, no entry stored in dbm for [ENSG00000254741.1] WARNING, no entry stored in dbm for [ENSG00000232085.1] WARNING, no entry stored in dbm for [ENSG00000231827.3] WARNING, no entry stored in dbm for [ENSG00000227827.3] WARNING, no entry stored in dbm for [ENSG00000272100.1] WARNING, no entry stored in dbm for [ENSG00000236154.1] WARNING, no entry stored in dbm for [ENSG00000232499.2] WARNING, no entry stored in dbm for [ENSG00000287398.1] WARNING, no entry stored in dbm for [ENSG00000275830.2] WARNING, no entry stored in dbm for [ENSG00000282772.1] WARNING, no entry stored in dbm for [ENSG00000282772.1] WARNING, no entry stored in dbm for [ENSG00000286215.1] WARNING, no entry stored in dbm for [ENSG00000231616.9] WARNING, no entry stored in dbm for [ENSG00000246203.2] WARNING, no entry stored in dbm for [ENSG00000225545.1] WARNING, no entry stored in dbm for [ENSG00000279631.1] WARNING, no entry stored in dbm for [ENSG00000197670.6] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000273149.1] WARNING, no entry stored in dbm for [ENSG00000283283.2] WARNING, no entry stored in dbm for [ENSG00000286073.1] WARNING, no entry stored in dbm for [ENSG00000283384.1] WARNING, no entry stored in dbm for [ENSG00000283773.1] WARNING, no entry stored in dbm for [ENSG00000287430.1] WARNING, no entry stored in dbm for [ENSG00000286594.1] WARNING, no entry stored in dbm for [ENSG00000286594.1] WARNING, no entry stored in dbm for [ENSG00000204684.4] WARNING, no entry stored in dbm for [ENSG00000257522.7] WARNING, no entry stored in dbm for [ENSG00000258860.1] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000261116.1] WARNING, no entry stored in dbm for [ENSG00000288543.1] WARNING, no entry stored in dbm for [ENSG00000280011.1] WARNING, no entry stored in dbm for [ENSG00000280184.2] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000241158.7] WARNING, no entry stored in dbm for [ENSG00000255693.3] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000276850.5] WARNING, no entry stored in dbm for [ENSG00000235181.1] WARNING, no entry stored in dbm for [ENSG00000276216.1] WARNING, no entry stored in dbm for [ENSG00000274642.1] WARNING, no entry stored in dbm for [ENSG00000234225.2] WARNING, no entry stored in dbm for [ENSG00000225370.1] WARNING, no entry stored in dbm for [ENSG00000277089.4] WARNING, no entry stored in dbm for [ENSG00000281741.2] WARNING, no entry stored in dbm for [ENSG00000264207.1] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000282572.2] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000242073.2] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000248969.1] WARNING, no entry stored in dbm for [ENSG00000262187.2] WARNING, no entry stored in dbm for [ENSG00000283345.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000288075.1] WARNING, no entry stored in dbm for [ENSG00000277332.1] WARNING, no entry stored in dbm for [ENSG00000277332.1] WARNING, no entry stored in dbm for [ENSG00000234241.1] WARNING, no entry stored in dbm for [ENSG00000251600.8] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000285108.1] WARNING, no entry stored in dbm for [ENSG00000262869.1] WARNING, no entry stored in dbm for [ENSG00000179967.11] WARNING, no entry stored in dbm for [ENSG00000287392.1] WARNING, no entry stored in dbm for [ENSG00000248551.1] WARNING, no entry stored in dbm for [ENSG00000286494.1] WARNING, no entry stored in dbm for [ENSG00000249001.5] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000227987.1] WARNING, no entry stored in dbm for [ENSG00000267053.8] WARNING, no entry stored in dbm for [ENSG00000223486.1] WARNING, no entry stored in dbm for [ENSG00000260417.1] WARNING, no entry stored in dbm for [ENSG00000276791.1] WARNING, no entry stored in dbm for [ENSG00000278734.1] WARNING, no entry stored in dbm for [ENSG00000270839.1] WARNING, no entry stored in dbm for [ENSG00000267198.1] WARNING, no entry stored in dbm for [ENSG00000131484.4] WARNING, no entry stored in dbm for [ENSG00000287826.1] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000259722.2] WARNING, no entry stored in dbm for [ENSG00000284698.1] WARNING, no entry stored in dbm for [ENSG00000215378.3] WARNING, no entry stored in dbm for [ENSG00000284698.1] WARNING, no entry stored in dbm for [ENSG00000234178.1] WARNING, no entry stored in dbm for [ENSG00000284698.1] WARNING, no entry stored in dbm for [ENSG00000285744.1] WARNING, no entry stored in dbm for [ENSG00000257607.1] WARNING, no entry stored in dbm for [ENSG00000272990.1] WARNING, no entry stored in dbm for [ENSG00000234129.8] WARNING, no entry stored in dbm for [ENSG00000243584.1] WARNING, no entry stored in dbm for [ENSG00000283674.3] WARNING, no entry stored in dbm for [ENSG00000284605.1] WARNING, no entry stored in dbm for [ENSG00000228862.4] WARNING, no entry stored in dbm for [ENSG00000251613.4] WARNING, no entry stored in dbm for [ENSG00000229212.8] WARNING, no entry stored in dbm for [ENSG00000240535.8] WARNING, no entry stored in dbm for [ENSG00000185684.15] WARNING, no entry stored in dbm for [ENSG00000260457.2] WARNING, no entry stored in dbm for [ENSG00000259273.1] WARNING, no entry stored in dbm for [ENSG00000267040.6] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000259354.5] WARNING, no entry stored in dbm for [ENSG00000273765.1] WARNING, no entry stored in dbm for [ENSG00000287555.1] WARNING, no entry stored in dbm for [ENSG00000235774.2] WARNING, no entry stored in dbm for [ENSG00000240418.1] WARNING, no entry stored in dbm for [ENSG00000284430.1] WARNING, no entry stored in dbm for [ENSG00000286307.1] WARNING, no entry stored in dbm for [ENSG00000250934.2] WARNING, no entry stored in dbm for [ENSG00000287306.1] WARNING, no entry stored in dbm for [ENSG00000269032.1] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000261329.6] WARNING, no entry stored in dbm for [ENSG00000267605.7] WARNING, no entry stored in dbm for [ENSG00000267605.7] WARNING, no entry stored in dbm for [ENSG00000286030.2] WARNING, no entry stored in dbm for [ENSG00000186148.13] WARNING, no entry stored in dbm for [ENSG00000237720.2] WARNING, no entry stored in dbm for [ENSG00000257453.1] WARNING, no entry stored in dbm for [ENSG00000268605.1] WARNING, no entry stored in dbm for [ENSG00000249839.1] WARNING, no entry stored in dbm for [ENSG00000268416.1] WARNING, no entry stored in dbm for [ENSG00000259410.5] WARNING, no entry stored in dbm for [ENSG00000238045.9] WARNING, no entry stored in dbm for [ENSG00000267121.6] WARNING, no entry stored in dbm for [ENSG00000226472.8] WARNING, no entry stored in dbm for [ENSG00000277534.1] WARNING, no entry stored in dbm for [ENSG00000236754.5] WARNING, no entry stored in dbm for [ENSG00000286739.1] WARNING, no entry stored in dbm for [ENSG00000267324.1] WARNING, no entry stored in dbm for [ENSG00000268189.2] WARNING, no entry stored in dbm for [ENSG00000272918.1] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000230392.1] WARNING, no entry stored in dbm for [ENSG00000287643.1] WARNING, no entry stored in dbm for [ENSG00000277283.1] WARNING, no entry stored in dbm for [ENSG00000274177.1] WARNING, no entry stored in dbm for [ENSG00000285486.1] WARNING, no entry stored in dbm for [ENSG00000287827.1] WARNING, no entry stored in dbm for [ENSG00000283366.2] WARNING, no entry stored in dbm for [ENSG00000281376.1] * STAR-Fusion complete. See output: /tmp/nxf.sWlV38Bo0A/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)