AIH curated blacklist: matched 5 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 50
Pass (FILTER=PASS): 3 (6.0%)
Fail (FILTER=FAIL): 47 (94.0%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 5
All 5 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(medium<high): 7
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 3
confidence_below_min(low<high): 3
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 1
total_reads_below_min(5.0<8.0): 1
total_reads_below_min(4.0<8.0): 1
confidence_below_min(medium<high);aih_curated_blacklist: 1
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 1
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0);aih_curated_blacklist: 1
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0);aih_curated_blacklist: 1
Breakdown by confidence:
high: 3 pass, 2 fail (total: 5)
low: 0 pass, 20 fail (total: 20)
medium: 0 pass, 25 fail (total: 25)
Arriba filter: 50 rows -> 3 PASS; wrote aih-tih-sc-9f6030-R1_A23WJ53LT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-9f6030-R1_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-9f6030-R1_A23WJ53LT4_1.arriba.fusions.filter_summary.txt