File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cb/8481a7bb850bb1e65f6d4d91a980e4/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6b/8a3ebdc833a2a75b635f3363492e5d/aih-tih-sc-0ce15f-R1_A23WJ53LT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cb/8481a7bb850bb1e65f6d4d91a980e4/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cb/8481a7bb850bb1e65f6d4d91a980e4/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/7747672e215b7907a88a16b9aed1e7/aih-tih-sc-0ce15f-R1_A23WJ53LT4_1
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-0ce15f-R1_A23WJ53LT4_1/abundance.h5
Successfully converted aih-tih-sc-0ce15f-R1_A23WJ53LT4_1/abundance.h5 to aih-tih-sc-0ce15f-R1_A23WJ53LT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-0ce15f-R1_A23WJ53LT4_1
  Mean Fragment Length: 119.1 bp
  Median Fragment Length: 110.0 bp
  pct_mito_est_counts: 0.008%
  pct_ribo_est_counts: 1.159%
  pct_hk_est_counts: 0.474%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.015%
  pct_ribo_tpm: 3.465%
  pct_hk_tpm: 0.751%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 6.1%