Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b0/ab85b718e9c06e496704d7ed174057/NTC_0001_0001_A23WJ53LT4_1.arriba.fusions.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d1/b8d2df7ed0abe8d9588d1e47f403ef/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d1/b8d2df7ed0abe8d9588d1e47f403ef/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/blacklist_breakpoint_database_2026-04-27.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-5ae5f7b1-ce8a-4a12-9374-820c751df9c5/09/a7ecdb27117590dd6e7bf9e221420e/arriba_filter_config.yaml
==> STAGING COMPLETE (5 inputs)


================================================================================
ARRIBA FILTERING SUMMARY
================================================================================

Total fusions: 0
Arriba filter: 0 rows -> 0 PASS; wrote NTC_0001_0001_A23WJ53LT4_1.arriba.fusions.filtered.tsv and NTC_0001_0001_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: NTC_0001_0001_A23WJ53LT4_1.arriba.fusions.filter_summary.txt