File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/07ccde272b14ed1ecfb2260392324f/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/3ae3641cd99811d179c8835c7d9975/aih-tih-sc-06a169-R1_A23WJ53LT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/07ccde272b14ed1ecfb2260392324f/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/07ccde272b14ed1ecfb2260392324f/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/19/d5084ac0a0707a39776151b62dfb21/aih-tih-sc-06a169-R1_A23WJ53LT4_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-06a169-R1_A23WJ53LT4_1/abundance.h5
Successfully converted aih-tih-sc-06a169-R1_A23WJ53LT4_1/abundance.h5 to aih-tih-sc-06a169-R1_A23WJ53LT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-06a169-R1_A23WJ53LT4_1
  Mean Fragment Length: 138.8 bp
  Median Fragment Length: 127.0 bp
  pct_mito_est_counts: 0.015%
  pct_ribo_est_counts: 1.524%
  pct_hk_est_counts: 0.48%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.031%
  pct_ribo_tpm: 4.646%
  pct_hk_tpm: 0.765%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.011%