Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ec/1748dea8404fa3bfbe10f758cc87bd/aih-tih-sc-e4cfff-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir/ref_genome.fa
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/00/23af3ed7688e63be5884dfee62f1d3/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/a5baf3e8520554ba40fe3fcfbe0328/aih-tih-sc-e4cfff-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/00/23af3ed7688e63be5884dfee62f1d3/.command.run
==> STAGING COMPLETE (5 inputs)

ls: *.sam: No such file or directory
ls: *.csi: No such file or directory
ls: *.crai: No such file or directory