File Info
- Filename
- aih-tih-sc-1dd7a6-R1_A23WJ53LT4_1.fusions.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/eb48b1efc47be198e6915eaa32dd3d/aih-tih-sc-1dd7a6-R1_A23WJ53LT4_1.fusions.csv
- Size
- 1.6 KB
- Task
- NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (aih-tih-sc-1dd7a6-R1_A23WJ53LT4_1)
- Attempt
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| OSBPL10--GADL1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr3:31733257#chr3:30728415,reading-frame: in-frame,type: deletion,split_reads1: 29,split_reads2: 14,discordant_mates: 0,coverage1: 777,coverage2: 101,confidence: high | position: chr3:31733257:-#chr3:30728415:-,junction_reads: 46,spanning_reads: 0,ffmp: 0.1555 | |
| TLK2P1--AC110079.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:34039043:-#chr4:118595912:+,junction_reads: 10,spanning_reads: 0,ffmp: 0.0251 | ||
| TLK2--AC240565.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:62560126:+#chr17:106864:-,junction_reads: 9,spanning_reads: 0,ffmp: 0.0027 | ||
| STX16--NPEPL1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr20:58673711#chr20:58691724,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 53,split_reads2: 45,discordant_mates: 0,coverage1: 2864,coverage2: 517,confidence: high | ||
| STON1--GTF2A1L | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr2:48591855#chr2:48620851,reading-frame: in-frame,type: deletion/read-through,split_reads1: 14,split_reads2: 15,discordant_mates: 1,coverage1: 614,coverage2: 161,confidence: high | |
| TVP23C--CDRT4 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr17:15503098#chr17:15440285,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 14,split_reads2: 14,discordant_mates: 1,coverage1: 487,coverage2: 163,confidence: high | |
| KLRC4--KLRK1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr12:10407636#chr12:10388875,reading-frame: stop-codon,type: deletion/read-through,split_reads1: 7,split_reads2: 4,discordant_mates: 0,coverage1: 95,coverage2: 216,confidence: high |
8 rows