AIH curated blacklist: matched 12 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 579
Pass (FILTER=PASS): 132 (22.8%)
Fail (FILTER=FAIL): 447 (77.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 12
All 12 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 169
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 60
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 32
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 20
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 20
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 17
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 15
confidence_below_min(low<high): 13
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 8
total_reads_below_min(5.0<8.0): 7
Breakdown by confidence:
high: 132 pass, 14 fail (total: 146)
low: 0 pass, 151 fail (total: 151)
medium: 0 pass, 282 fail (total: 282)
Arriba filter: 579 rows -> 132 PASS; wrote aih-tih-sc-cab2fc-R1_A23WJ53LT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-cab2fc-R1_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-cab2fc-R1_A23WJ53LT4_1.arriba.fusions.filter_summary.txt