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aih-tih-sc-19e09e-R1_A23WJ53LT4_1.fusions.csv
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s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6a/186f8541c294de3e3e6f2edbe092d1/aih-tih-sc-19e09e-R1_A23WJ53LT4_1.fusions.csv
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Task
NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (aih-tih-sc-19e09e-R1_A23WJ53LT4_1)
Attempt

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Fusion Databases Score Explained score arriba starfusion
CX3CL1--RBPMS 0.125 0.5 * (0.125 + 0.125) + 0.5 * () position: chr16:57372638#chr8:30474779,reading-frame: out-of-frame,type: translocation,split_reads1: 107,split_reads2: 139,discordant_mates: 0,coverage1: 9689,coverage2: 11554,confidence: high position: chr16:57372638:+#chr8:30474779:+,junction_reads: 250,spanning_reads: 0,ffmp: 1.1035
PCDHGA3--PCDHGA8 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141346457#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 145,split_reads2: 64,discordant_mates: 0,coverage1: 3659,coverage2: 11943,confidence: high
PCDHGA3--PCDHGA9 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141346457#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 145,split_reads2: 64,discordant_mates: 0,coverage1: 3659,coverage2: 11943,confidence: high
PCDHGA3--PCDHGB6 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141346457#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 145,split_reads2: 64,discordant_mates: 0,coverage1: 3659,coverage2: 11943,confidence: high
PCDHGA3--PCDHGA10 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141346457#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 145,split_reads2: 64,discordant_mates: 0,coverage1: 3659,coverage2: 11943,confidence: high
PCDHGA3--PCDHGB7 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141346457#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 145,split_reads2: 64,discordant_mates: 0,coverage1: 3659,coverage2: 11943,confidence: high
PCDHGA3--PCDHGA11 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141346457#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 145,split_reads2: 64,discordant_mates: 0,coverage1: 3659,coverage2: 11943,confidence: high
PCDHGA3--PCDHGA12 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141346457#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 145,split_reads2: 64,discordant_mates: 0,coverage1: 3659,coverage2: 11943,confidence: high
PCDHGA3--PCDHGC3 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141346457#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 145,split_reads2: 64,discordant_mates: 0,coverage1: 3659,coverage2: 11943,confidence: high
PCDHGA3--PCDHGC4 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141346457#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 145,split_reads2: 64,discordant_mates: 0,coverage1: 3659,coverage2: 11943,confidence: high
PCDHGA3--PCDHGC5 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141346457#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 145,split_reads2: 64,discordant_mates: 0,coverage1: 3659,coverage2: 11943,confidence: high
PCDHGB2--PCDHGC5 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 38,split_reads2: 31,discordant_mates: 0,coverage1: 1415,coverage2: 11943,confidence: high
PCDHGB2--PCDHGC4 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 38,split_reads2: 31,discordant_mates: 0,coverage1: 1415,coverage2: 11943,confidence: high
PCDHGB2--PCDHGC3 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 38,split_reads2: 31,discordant_mates: 0,coverage1: 1415,coverage2: 11943,confidence: high
PCDHGB2--PCDHGA8 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 38,split_reads2: 31,discordant_mates: 0,coverage1: 1415,coverage2: 11943,confidence: high
PCDHGB2--PCDHGA10 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 38,split_reads2: 31,discordant_mates: 0,coverage1: 1415,coverage2: 11943,confidence: high
PCDHGB2--PCDHGA11 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 38,split_reads2: 31,discordant_mates: 0,coverage1: 1415,coverage2: 11943,confidence: high
PCDHGB2--PCDHGB7 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 38,split_reads2: 31,discordant_mates: 0,coverage1: 1415,coverage2: 11943,confidence: high
PCDHGB2--PCDHGB6 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 38,split_reads2: 31,discordant_mates: 0,coverage1: 1415,coverage2: 11943,confidence: high
PCDHGB2--PCDHGA12 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 38,split_reads2: 31,discordant_mates: 0,coverage1: 1415,coverage2: 11943,confidence: high
PCDHGB2--PCDHGA9 0.062 0.5 * (0.125) + 0.5 * () position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 38,split_reads2: 31,discordant_mates: 0,coverage1: 1415,coverage2: 11943,confidence: high
TVP23C--CDRT4 FusionGDB2 0.062 0.5 * (0.125) + 0.5 * (0.000) position: chr17:15503098#chr17:15440285,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 5,split_reads2: 15,discordant_mates: 0,coverage1: 353,coverage2: 206,confidence: high
23 rows