AIH curated blacklist: matched 12 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 216
Pass (FILTER=PASS): 21 (9.7%)
Fail (FILTER=FAIL): 195 (90.3%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 12
All 12 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 29
confidence_below_min(medium<high): 27
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 25
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 17
confidence_below_min(low<high): 15
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 4
total_reads_below_min(3.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 3
Breakdown by confidence:
high: 21 pass, 7 fail (total: 28)
low: 0 pass, 107 fail (total: 107)
medium: 0 pass, 81 fail (total: 81)
Arriba filter: 216 rows -> 21 PASS; wrote aih-tih-sc-606237-R1_A23WJ53LT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-606237-R1_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-606237-R1_A23WJ53LT4_1.arriba.fusions.filter_summary.txt