File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5a/17d162d0481e17abd0ae862ae3b8b8/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/eadd1200f739ef43ce3f1d2cab61bb/aih-tih-sc-19e09e-R1_A23WJ53LT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5a/17d162d0481e17abd0ae862ae3b8b8/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5a/17d162d0481e17abd0ae862ae3b8b8/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/74/b1a2985fb0bb514a43af196a5533db/aih-tih-sc-19e09e-R1_A23WJ53LT4_1
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-19e09e-R1_A23WJ53LT4_1/abundance.h5
Successfully converted aih-tih-sc-19e09e-R1_A23WJ53LT4_1/abundance.h5 to aih-tih-sc-19e09e-R1_A23WJ53LT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-19e09e-R1_A23WJ53LT4_1
  Mean Fragment Length: 123.3 bp
  Median Fragment Length: 114.0 bp
  pct_mito_est_counts: 0.019%
  pct_ribo_est_counts: 1.325%
  pct_hk_est_counts: 0.546%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.033%
  pct_ribo_tpm: 3.703%
  pct_hk_tpm: 0.762%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 4.286%