[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-1351d2-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	289478202
Known Splicing Events:	286958642
Partial Novel Splicing Events:	1407890
Novel Splicing Events:	1035385
Filtered Splicing Events:	76285

Total splicing  Junctions:	371412
Known Splicing Junctions:	228143
Partial Novel Splicing Junctions:	81229
Novel Splicing Junctions:	62040

===================================================================
Create BED file ...
Create Interact file ...