Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c3/ef8ad89b69bf90569318158e992c0b/aih-tih-sc-00d05f-R1_A23WJ53LT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c3/ef8ad89b69bf90569318158e992c0b/aih-tih-sc-00d05f-R1_A23WJ53LT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d4/e88c47953a7f0cd33d14ed88aae2c6/aih-tih-sc-00d05f-R1_A23WJ53LT4_1.Chimeric.out.junction
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f3/2ff1f8603ad0d9c35b51554c176b11/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f3/2ff1f8603ad0d9c35b51554c176b11/.command.run
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.uNDKPN7fPZ/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.uNDKPN7fPZ/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary
-sample contains 228644343 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.uNDKPN7fPZ/ctat_genome_lib_build_dir  -J /tmp/nxf.uNDKPN7fPZ/aih-tih-sc-00d05f-R1_A23WJ53LT4_1.Chimeric.out.junction  -O /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.uNDKPN7fPZ/aih-tih-sc-00d05f-R1_A23WJ53LT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.uNDKPN7fPZ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[1870000], rate=48910.20/min -building interval tree based on /tmp/nxf.uNDKPN7fPZ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[1860000], rate=39588.51/min -building interval tree based on /tmp/nxf.uNDKPN7fPZ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[1450000], rate=31844.80/min 
[1460000], rate=31959.14/min 
[1470000], rate=32084.39/min 
[1480000], rate=32208.92/min 
[1490000], rate=32332.73/min 
[1500000], rate=32420.75/min 
[1510000], rate=32554.80/min 
[1520000], rate=32699.89/min 
[1530000], rate=32844.36/min 
[1540000], rate=32952.92/min 
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[1560000], rate=33274.08/min 
[1570000], rate=33380.58/min 
[1580000], rate=33510.07/min 
[1590000], rate=33627.07/min 
[1600000], rate=33767.15/min 
[1610000], rate=33835.38/min 
[1620000], rate=33656.51/min 
[1630000], rate=33573.64/min 
[1640000], rate=33458.01/min 
[1650000], rate=33344.56/min 
[1660000], rate=33299.90/min 
[1670000], rate=33244.86/min 
[1680000], rate=33201.58/min 
[1690000], rate=33169.77/min 
[1700000], rate=33063.21/min 
[1710000], rate=33064.78/min 
[1720000], rate=33076.92/min 
[1730000], rate=33078.39/min 
[1740000], rate=33079.85/min 
[1750000], rate=33102.14/min 
[1760000], rate=33113.83/min 
[1770000], rate=33125.39/min 
[1780000], rate=33157.40/min 
[1790000], rate=33199.38/min 
[1800000], rate=33251.23/min 
[1810000], rate=33323.11/min 
[1820000], rate=33384.29/min 
[1830000], rate=33445.02/min 
[1840000], rate=33525.66/min 
[1850000], rate=33605.81/min -building interval tree based on /tmp/nxf.uNDKPN7fPZ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=46153.85/min 
[20000], rate=46153.85/min 
[30000], rate=50000.00/min 
[40000], rate=51063.83/min 
[50000], rate=53571.43/min 
[60000], rate=61016.95/min 
[70000], rate=70000.00/min 
[80000], rate=73846.15/min 
[90000], rate=72972.97/min 
[100000], rate=71428.57/min 
[110000], rate=68041.24/min 
[120000], rate=67924.53/min 
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[150000], rate=68702.29/min 
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[170000], rate=61818.18/min 
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[200000], rate=64864.86/min 
[210000], rate=64948.45/min 
[220000], rate=66331.66/min 
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[240000], rate=67605.63/min 
[250000], rate=67873.30/min 
[260000], rate=69026.55/min 
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[370000], rate=31136.04/min 
[380000], rate=28934.01/min 
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[400000], rate=26755.85/min 
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[520000], rate=19987.19/min 
[530000], rate=20063.09/min 
[540000], rate=20037.11/min 
[550000], rate=19784.17/min 
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[570000], rate=20035.15/min 
[580000], rate=20173.91/min 
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[630000], rate=21011.67/min 
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[670000], rate=20796.69/min 
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[690000], rate=21079.43/min 
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[710000], rate=21396.28/min 
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[750000], rate=21972.66/min 
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[780000], rate=22403.06/min 
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[800000], rate=22738.04/min 
[810000], rate=22892.13/min 
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[840000], rate=23441.86/min 
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[930000], rate=25067.39/min 
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[1000000], rate=25917.93/min 
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[1340000], rate=27245.00/min 
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[1370000], rate=27510.04/min 
[1380000], rate=27636.85/min 
[1390000], rate=27744.51/min 
[1400000], rate=27833.00/min 
[1410000], rate=27930.01/min 
[1420000], rate=28026.32/min 
[1430000], rate=28121.93/min 
[1440000], rate=28161.67/min 
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[1480000], rate=28654.40/min 
[1490000], rate=28773.74/min 
[1500000], rate=28901.73/min 
[1510000], rate=28871.89/min 
[1520000], rate=28815.17/min 
[1530000], rate=28786.45/min 
[1540000], rate=28731.34/min 
[1550000], rate=28712.57/min 
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[1570000], rate=28710.76/min 
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[1590000], rate=28743.60/min 
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[1610000], rate=28775.69/min 
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[1650000], rate=28938.91/min 
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[1680000], rate=29107.71/min 
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[1700000], rate=29259.90/min 
[1710000], rate=29347.83/min 
[1720000], rate=29443.65/min 
[1730000], rate=29547.40/min 
[1740000], rate=29642.25/min 
[1750000], rate=29745.04/min 
[1760000], rate=29847.37/min 
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[1820000], rate=30536.91/min 
[1830000], rate=30610.54/min 
[1840000], rate=30700.78/min 
[1850000], rate=30790.57/min 
[1860000], rate=30888.46/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.uNDKPN7fPZ/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 9000000.00 reads per min processed...  
 8000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 5142857.14 reads per min processed...  
 5250000.00 reads per min processed...  
 4800000.00 reads per min processed...  
 4909090.91 reads per min processed...  
 4615384.62 reads per min processed...  
 4714285.71 reads per min processed...  
 4800000.00 reads per min processed...  
 4588235.29 reads per min processed...  
 4666666.67 reads per min processed...  
 4500000.00 reads per min processed...  
 4571428.57 reads per min processed...  
 4434782.61 reads per min processed...  
 4500000.00 reads per min processed...  
 4384615.38 reads per min processed...  
 4285714.29 reads per min processed...  
 4344827.59 reads per min processed...  
 4258064.52 reads per min processed...  
 4312500.00 reads per min processed...  
 4235294.12 reads per min processed...  
 4285714.29 reads per min processed...  
 4333333.33 reads per min processed...  
 4263157.89 reads per min processed...  
 4307692.31 reads per min processed...  
 4350000.00 reads per min processed...  
 4285714.29 reads per min processed...  
 4325581.40 reads per min processed...  
 4363636.36 reads per min processed...  
 4400000.00 reads per min processed...  
 4340425.53 reads per min processed...  
 4375000.00 reads per min processed...  
 4408163.27 reads per min processed...  
 4440000.00 reads per min processed...  
 4560000.00 reads per min processed...  
 4680000.00 reads per min processed...  
 4705882.35 reads per min processed...  
 4730769.23 reads per min processed...  
 4666666.67 reads per min processed...  
 4690909.09 reads per min processed...  
 4714285.71 reads per min processed...  
 4655172.41 reads per min processed...  
 4677966.10 reads per min processed...  
 4700000.00 reads per min processed...  
 4645161.29 reads per min processed...  
 4666666.67 reads per min processed...  
 4687500.00 reads per min processed...  
 4636363.64 reads per min processed...  
 4656716.42 reads per min processed...  
 4676470.59 reads per min processed...  
 4695652.17 reads per min processed...  
 4647887.32 reads per min processed...  
 4666666.67 reads per min processed...  
 4684931.51 reads per min processed...  
 4702702.70 reads per min processed...  
 4720000.00 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.uNDKPN7fPZ/aih-tih-sc-00d05f-R1_A23WJ53LT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.uNDKPN7fPZ/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -293137.941615
EM: Round [1] log likelihood: -292973.967377
EM: Round [2] log likelihood: -292912.240597
EM: Round [3] log likelihood: -292882.966048
EM: Round [4] log likelihood: -292867.612389
EM: Round [5] log likelihood: -292859.137908
EM: Round [6] log likelihood: -292854.275603
EM: Round [7] log likelihood: -292851.371459
EM: Round [8] log likelihood: -292849.559247
EM: Round [9] log likelihood: -292848.375992
EM: Round [10] log likelihood: -292847.568690
EM: Round [11] log likelihood: -292846.995231
EM: Round [12] log likelihood: -292846.573201
EM: Round [13] log likelihood: -292846.253090
EM: Round [14] log likelihood: -292846.004053
EM: Round [15] log likelihood: -292845.806169
EM: Round [16] log likelihood: -292845.646126
EM: Round [17] log likelihood: -292845.514746
EM: Round [18] log likelihood: -292845.405526
EM: Round [19] log likelihood: -292845.313743
EM: Round [20] log likelihood: -292845.235892
EM: Round [21] log likelihood: -292845.169325
EM: Round [22] log likelihood: -292845.112008
EM: Round [23] log likelihood: -292845.062354
EM: Round [24] log likelihood: -292845.019108
EM: Round [25] log likelihood: -292844.981268
EM: Round [26] log likelihood: -292844.948023
EM: Round [27] log likelihood: -292844.918708
EM: Round [28] log likelihood: -292844.892777
EM: Round [29] log likelihood: -292844.869775
EM: Round [30] log likelihood: -292844.849321
EM: Round [31] log likelihood: -292844.831091
EM: Round [32] log likelihood: -292844.814813
EM: Round [33] log likelihood: -292844.800252
EM: Round [34] log likelihood: -292844.787206
EM: Round [35] log likelihood: -292844.775500
EM: Round [36] log likelihood: -292844.764984
EM: Round [37] log likelihood: -292844.755526
EM: Round [38] log likelihood: -292844.747010
EM: Round [39] log likelihood: -292844.739335
EM: Round [40] log likelihood: -292844.732411
EM: Round [41] log likelihood: -292844.726160
EM: Round [42] log likelihood: -292844.720513
EM: Round [43] log likelihood: -292844.715407
EM: Round [44] log likelihood: -292844.710788
EM: Round [45] log likelihood: -292844.706606
EM: Round [46] log likelihood: -292844.702817
EM: Round [47] log likelihood: -292844.699384
EM: Round [48] log likelihood: -292844.696271
EM: Round [49] log likelihood: -292844.693446
EM: Round [50] log likelihood: -292844.690883
EM: Round [51] log likelihood: -292844.688555
EM: Round [52] log likelihood: -292844.686440
EM: Round [53] log likelihood: -292844.684517
EM: Round [54] log likelihood: -292844.682770
EM: Round [55] log likelihood: -292844.681180
EM: Round [56] log likelihood: -292844.679733
EM: Round [57] log likelihood: -292844.678416
EM: Round [58] log likelihood: -292844.677217
EM: Round [59] log likelihood: -292844.676124
EM: Round [60] log likelihood: -292844.675129
EM: Round [61] log likelihood: -292844.674221
EM: Round [62] log likelihood: -292844.673394
EM: Round [63] log likelihood: -292844.672639
EM: Round [64] log likelihood: -292844.671950
EM: Round [65] log likelihood: -292844.671321
EM: Round [66] log likelihood: -292844.670746
EM: Round [67] log likelihood: -292844.670221
EM: Round [68] log likelihood: -292844.669742
EM: Round [69] log likelihood: -292844.669304
EM: Round [70] log likelihood: -292844.668903
EM: Round [71] log likelihood: -292844.668536
EM: Round [72] log likelihood: -292844.668200
EM: Round [73] log likelihood: -292844.667893
EM: Round [74] log likelihood: -292844.667612
EM: Round [75] log likelihood: -292844.667354
EM: Round [76] log likelihood: -292844.667118
EM: Round [77] log likelihood: -292844.666901
EM: Round [78] log likelihood: -292844.666702
EM: Round [79] log likelihood: -292844.666520
EM: Round [80] log likelihood: -292844.666353
EM: Round [81] log likelihood: -292844.666199
EM: Round [82] log likelihood: -292844.666058
EM: Round [83] log likelihood: -292844.665928
EM: Round [84] log likelihood: -292844.665808
EM: Round [85] log likelihood: -292844.665699
EM: Round [86] log likelihood: -292844.665598
EM: Round [87] log likelihood: -292844.665504
EM: Stopping iterations at round 87 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -292765.577097
EM: Round [1] log likelihood: -292622.389078
EM: Round [2] log likelihood: -292569.909394
EM: Round [3] log likelihood: -292545.845440
EM: Round [4] log likelihood: -292533.646168
EM: Round [5] log likelihood: -292527.110590
EM: Round [6] log likelihood: -292523.459189
EM: Round [7] log likelihood: -292521.333776
EM: Round [8] log likelihood: -292520.042031
EM: Round [9] log likelihood: -292519.221136
EM: Round [10] log likelihood: -292518.675978
EM: Round [11] log likelihood: -292518.298653
EM: Round [12] log likelihood: -292518.027597
EM: Round [13] log likelihood: -292517.826481
EM: Round [14] log likelihood: -292517.673093
EM: Round [15] log likelihood: -292517.553361
EM: Round [16] log likelihood: -292517.458060
EM: Round [17] log likelihood: -292517.380948
EM: Round [18] log likelihood: -292517.317675
EM: Round [19] log likelihood: -292517.265133
EM: Round [20] log likelihood: -292517.221052
EM: Round [21] log likelihood: -292517.183737
EM: Round [22] log likelihood: -292517.151905
EM: Round [23] log likelihood: -292517.124566
EM: Round [24] log likelihood: -292517.100945
EM: Round [25] log likelihood: -292517.080431
EM: Round [26] log likelihood: -292517.062533
EM: Round [27] log likelihood: -292517.046854
EM: Round [28] log likelihood: -292517.033071
EM: Round [29] log likelihood: -292517.020914
EM: Round [30] log likelihood: -292517.010162
EM: Round [31] log likelihood: -292517.000629
EM: Round [32] log likelihood: -292516.992156
EM: Round [33] log likelihood: -292516.984611
EM: Round [34] log likelihood: -292516.977879
EM: Round [35] log likelihood: -292516.971863
EM: Round [36] log likelihood: -292516.966479
EM: Round [37] log likelihood: -292516.961653
EM: Round [38] log likelihood: -292516.957322
EM: Round [39] log likelihood: -292516.953430
EM: Round [40] log likelihood: -292516.949930
EM: Round [41] log likelihood: -292516.946778
EM: Round [42] log likelihood: -292516.943937
EM: Round [43] log likelihood: -292516.941375
EM: Round [44] log likelihood: -292516.939062
EM: Round [45] log likelihood: -292516.936972
EM: Round [46] log likelihood: -292516.935082
EM: Round [47] log likelihood: -292516.933372
EM: Round [48] log likelihood: -292516.931824
EM: Round [49] log likelihood: -292516.930421
EM: Round [50] log likelihood: -292516.929149
EM: Round [51] log likelihood: -292516.927996
EM: Round [52] log likelihood: -292516.926949
EM: Round [53] log likelihood: -292516.925998
EM: Round [54] log likelihood: -292516.925134
EM: Round [55] log likelihood: -292516.924349
EM: Round [56] log likelihood: -292516.923634
EM: Round [57] log likelihood: -292516.922985
EM: Round [58] log likelihood: -292516.922393
EM: Round [59] log likelihood: -292516.921854
EM: Round [60] log likelihood: -292516.921363
EM: Round [61] log likelihood: -292516.920915
EM: Round [62] log likelihood: -292516.920507
EM: Round [63] log likelihood: -292516.920134
EM: Round [64] log likelihood: -292516.919794
EM: Round [65] log likelihood: -292516.919483
EM: Round [66] log likelihood: -292516.919199
EM: Round [67] log likelihood: -292516.918939
EM: Round [68] log likelihood: -292516.918702
EM: Round [69] log likelihood: -292516.918485
EM: Round [70] log likelihood: -292516.918286
EM: Round [71] log likelihood: -292516.918104
EM: Round [72] log likelihood: -292516.917937
EM: Round [73] log likelihood: -292516.917784
EM: Round [74] log likelihood: -292516.917643
EM: Round [75] log likelihood: -292516.917514
EM: Round [76] log likelihood: -292516.917396
EM: Round [77] log likelihood: -292516.917287
EM: Round [78] log likelihood: -292516.917187
EM: Stopping iterations at round 78 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.uNDKPN7fPZ/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.uNDKPN7fPZ/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.uNDKPN7fPZ/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 228644343 > /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.uNDKPN7fPZ/ctat_genome_lib_build_dir > /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.uNDKPN7fPZ/ctat_genome_lib_build_dir --annotate /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.uNDKPN7fPZ/ctat_genome_lib_build_dir
-done, see /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.uNDKPN7fPZ/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2864, filtered: 11077)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.uNDKPN7fPZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.uNDKPN7fPZ/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000259345.7]
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WARNING, no entry stored in dbm for [ENSG00000249752.1]
WARNING, no entry stored in dbm for [ENSG00000256625.1]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000236790.6]
WARNING, no entry stored in dbm for [ENSG00000251520.1]
WARNING, no entry stored in dbm for [ENSG00000201121.1]
WARNING, no entry stored in dbm for [ENSG00000201098.1]
WARNING, no entry stored in dbm for [ENSG00000266710.2]
WARNING, no entry stored in dbm for [ENSG00000183604.14]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000224769.1]
WARNING, no entry stored in dbm for [ENSG00000242779.7]
WARNING, no entry stored in dbm for [ENSG00000268034.1]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000197847.12]
WARNING, no entry stored in dbm for [ENSG00000287624.1]
WARNING, no entry stored in dbm for [ENSG00000288577.1]
WARNING, no entry stored in dbm for [ENSG00000223779.6]
WARNING, no entry stored in dbm for [ENSG00000228241.1]
WARNING, no entry stored in dbm for [ENSG00000175741.5]
WARNING, no entry stored in dbm for [ENSG00000261971.8]
WARNING, no entry stored in dbm for [ENSG00000231969.2]
WARNING, no entry stored in dbm for [ENSG00000230323.6]
WARNING, no entry stored in dbm for [ENSG00000260083.2]
WARNING, no entry stored in dbm for [ENSG00000259240.1]
WARNING, no entry stored in dbm for [ENSG00000284055.1]
WARNING, no entry stored in dbm for [ENSG00000234474.3]
WARNING, no entry stored in dbm for [ENSG00000257084.1]
WARNING, no entry stored in dbm for [ENSG00000255248.9]
WARNING, no entry stored in dbm for [ENSG00000261519.3]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000246889.2]
WARNING, no entry stored in dbm for [ENSG00000238024.1]
WARNING, no entry stored in dbm for [ENSG00000198358.4]
WARNING, no entry stored in dbm for [ENSG00000267345.1]
WARNING, no entry stored in dbm for [ENSG00000262500.1]
WARNING, no entry stored in dbm for [ENSG00000260372.7]
WARNING, no entry stored in dbm for [ENSG00000267278.6]
WARNING, no entry stored in dbm for [ENSG00000177596.1]
WARNING, no entry stored in dbm for [ENSG00000280383.1]
WARNING, no entry stored in dbm for [ENSG00000172460.17]
WARNING, no entry stored in dbm for [ENSG00000242529.1]
WARNING, no entry stored in dbm for [ENSG00000239827.8]
WARNING, no entry stored in dbm for [ENSG00000279649.1]
WARNING, no entry stored in dbm for [ENSG00000258792.4]
WARNING, no entry stored in dbm for [ENSG00000251034.2]
WARNING, no entry stored in dbm for [ENSG00000266504.1]
WARNING, no entry stored in dbm for [ENSG00000261691.1]
WARNING, no entry stored in dbm for [ENSG00000261801.6]
WARNING, no entry stored in dbm for [ENSG00000213904.9]
WARNING, no entry stored in dbm for [ENSG00000181908.5]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000212743.2]
WARNING, no entry stored in dbm for [ENSG00000226453.2]
WARNING, no entry stored in dbm for [ENSG00000220908.2]
WARNING, no entry stored in dbm for [ENSG00000205763.13]
WARNING, no entry stored in dbm for [ENSG00000228718.2]
WARNING, no entry stored in dbm for [ENSG00000248238.2]
WARNING, no entry stored in dbm for [ENSG00000258499.1]
WARNING, no entry stored in dbm for [ENSG00000281903.2]
WARNING, no entry stored in dbm for [ENSG00000226125.2]
WARNING, no entry stored in dbm for [ENSG00000232679.2]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000236052.2]
WARNING, no entry stored in dbm for [ENSG00000253161.5]
WARNING, no entry stored in dbm for [ENSG00000214900.11]
WARNING, no entry stored in dbm for [ENSG00000261326.4]
WARNING, no entry stored in dbm for [ENSG00000260924.2]
WARNING, no entry stored in dbm for [ENSG00000247157.7]
WARNING, no entry stored in dbm for [ENSG00000247157.7]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000236963.7]
WARNING, no entry stored in dbm for [ENSG00000204054.14]
WARNING, no entry stored in dbm for [ENSG00000240875.6]
WARNING, no entry stored in dbm for [ENSG00000240875.6]
WARNING, no entry stored in dbm for [ENSG00000266904.6]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000228221.6]
WARNING, no entry stored in dbm for [ENSG00000233237.8]
WARNING, no entry stored in dbm for [ENSG00000238121.6]
WARNING, no entry stored in dbm for [ENSG00000188185.13]
WARNING, no entry stored in dbm for [ENSG00000188185.13]
WARNING, no entry stored in dbm for [ENSG00000231329.8]
WARNING, no entry stored in dbm for [ENSG00000236871.7]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000260473.2]
WARNING, no entry stored in dbm for [ENSG00000229526.2]
WARNING, no entry stored in dbm for [ENSG00000266820.1]
WARNING, no entry stored in dbm for [ENSG00000235824.5]
WARNING, no entry stored in dbm for [ENSG00000276571.1]
WARNING, no entry stored in dbm for [ENSG00000270222.1]
WARNING, no entry stored in dbm for [ENSG00000228215.3]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000244558.6]
WARNING, no entry stored in dbm for [ENSG00000287688.1]
WARNING, no entry stored in dbm for [ENSG00000259673.6]
WARNING, no entry stored in dbm for [ENSG00000227811.3]
WARNING, no entry stored in dbm for [ENSG00000273419.1]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000226777.7]
WARNING, no entry stored in dbm for [ENSG00000259269.2]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000230606.11]
WARNING, no entry stored in dbm for [ENSG00000237424.1]
WARNING, no entry stored in dbm for [ENSG00000233387.1]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000215895.4]
WARNING, no entry stored in dbm for [ENSG00000250742.4]
WARNING, no entry stored in dbm for [ENSG00000230946.3]
WARNING, no entry stored in dbm for [ENSG00000230330.1]
WARNING, no entry stored in dbm for [ENSG00000234705.2]
WARNING, no entry stored in dbm for [ENSG00000235290.1]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000226757.2]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000287646.1]
WARNING, no entry stored in dbm for [ENSG00000253816.3]
WARNING, no entry stored in dbm for [ENSG00000253816.3]
WARNING, no entry stored in dbm for [ENSG00000244383.2]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000279368.1]
WARNING, no entry stored in dbm for [ENSG00000276318.1]
WARNING, no entry stored in dbm for [ENSG00000227038.3]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000226002.1]
WARNING, no entry stored in dbm for [ENSG00000227113.2]
WARNING, no entry stored in dbm for [ENSG00000226002.1]
WARNING, no entry stored in dbm for [ENSG00000227113.2]
WARNING, no entry stored in dbm for [ENSG00000215326.3]
WARNING, no entry stored in dbm for [ENSG00000205786.8]
WARNING, no entry stored in dbm for [ENSG00000285796.1]
WARNING, no entry stored in dbm for [ENSG00000244257.5]
WARNING, no entry stored in dbm for [ENSG00000232284.7]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000236474.1]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000253204.1]
WARNING, no entry stored in dbm for [ENSG00000227128.5]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000223695.1]
WARNING, no entry stored in dbm for [ENSG00000234156.3]
WARNING, no entry stored in dbm for [ENSG00000180769.10]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000244026.6]
WARNING, no entry stored in dbm for [ENSG00000255052.5]
WARNING, no entry stored in dbm for [ENSG00000241288.8]
WARNING, no entry stored in dbm for [ENSG00000185684.15]
WARNING, no entry stored in dbm for [ENSG00000234709.2]
WARNING, no entry stored in dbm for [ENSG00000229848.1]
WARNING, no entry stored in dbm for [ENSG00000265787.2]
WARNING, no entry stored in dbm for [ENSG00000278631.1]
WARNING, no entry stored in dbm for [ENSG00000286381.1]
WARNING, no entry stored in dbm for [ENSG00000249684.6]
WARNING, no entry stored in dbm for [ENSG00000249145.3]
WARNING, no entry stored in dbm for [ENSG00000211459.2]
WARNING, no entry stored in dbm for [ENSG00000230876.8]
WARNING, no entry stored in dbm for [ENSG00000226445.2]
WARNING, no entry stored in dbm for [ENSG00000264044.1]
WARNING, no entry stored in dbm for [ENSG00000228193.1]
WARNING, no entry stored in dbm for [ENSG00000234152.1]
WARNING, no entry stored in dbm for [ENSG00000184991.3]
WARNING, no entry stored in dbm for [ENSG00000244306.11]
WARNING, no entry stored in dbm for [ENSG00000197927.13]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
WARNING, no entry stored in dbm for [ENSG00000257222.1]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000258598.1]
WARNING, no entry stored in dbm for [ENSG00000251593.1]
WARNING, no entry stored in dbm for [ENSG00000285796.1]
WARNING, no entry stored in dbm for [ENSG00000245025.3]
WARNING, no entry stored in dbm for [ENSG00000235519.3]
WARNING, no entry stored in dbm for [ENSG00000108958.4]
WARNING, no entry stored in dbm for [ENSG00000245870.4]
WARNING, no entry stored in dbm for [ENSG00000280018.4]
WARNING, no entry stored in dbm for [ENSG00000250131.2]
WARNING, no entry stored in dbm for [ENSG00000231205.11]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000234337.4]
WARNING, no entry stored in dbm for [ENSG00000270533.2]
WARNING, no entry stored in dbm for [ENSG00000234323.8]
WARNING, no entry stored in dbm for [ENSG00000231906.1]
WARNING, no entry stored in dbm for [ENSG00000234463.1]
WARNING, no entry stored in dbm for [ENSG00000257759.2]
WARNING, no entry stored in dbm for [ENSG00000246695.8]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000226191.3]
WARNING, no entry stored in dbm for [ENSG00000260750.7]
WARNING, no entry stored in dbm for [ENSG00000247572.8]
WARNING, no entry stored in dbm for [ENSG00000163098.6]
WARNING, no entry stored in dbm for [ENSG00000213753.11]
WARNING, no entry stored in dbm for [ENSG00000241104.5]
WARNING, no entry stored in dbm for [ENSG00000225727.3]
WARNING, no entry stored in dbm for [ENSG00000203799.13]
WARNING, no entry stored in dbm for [ENSG00000233627.2]
WARNING, no entry stored in dbm for [ENSG00000228205.1]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000197989.14]
WARNING, no entry stored in dbm for [ENSG00000224660.2]
WARNING, no entry stored in dbm for [ENSG00000236778.8]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000227742.2]
WARNING, no entry stored in dbm for [ENSG00000287151.1]
WARNING, no entry stored in dbm for [ENSG00000213057.5]
WARNING, no entry stored in dbm for [ENSG00000224750.6]
WARNING, no entry stored in dbm for [ENSG00000215146.5]
WARNING, no entry stored in dbm for [ENSG00000230131.6]
WARNING, no entry stored in dbm for [ENSG00000246379.8]
WARNING, no entry stored in dbm for [ENSG00000263647.1]
WARNING, no entry stored in dbm for [ENSG00000267491.1]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000233006.8]
WARNING, no entry stored in dbm for [ENSG00000279249.3]
WARNING, no entry stored in dbm for [ENSG00000236559.1]
WARNING, no entry stored in dbm for [ENSG00000279022.1]
WARNING, no entry stored in dbm for [ENSG00000229358.3]
WARNING, no entry stored in dbm for [ENSG00000254973.2]
WARNING, no entry stored in dbm for [ENSG00000224155.2]
WARNING, no entry stored in dbm for [ENSG00000205464.13]
WARNING, no entry stored in dbm for [ENSG00000256280.1]
WARNING, no entry stored in dbm for [ENSG00000257193.1]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000235919.4]
WARNING, no entry stored in dbm for [ENSG00000244716.3]
WARNING, no entry stored in dbm for [ENSG00000271147.8]
WARNING, no entry stored in dbm for [ENSG00000231365.6]
WARNING, no entry stored in dbm for [ENSG00000228960.6]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000215154.6]
WARNING, no entry stored in dbm for [ENSG00000264150.1]
WARNING, no entry stored in dbm for [ENSG00000247271.7]
WARNING, no entry stored in dbm for [ENSG00000253332.1]
WARNING, no entry stored in dbm for [ENSG00000213979.3]
WARNING, no entry stored in dbm for [ENSG00000260877.2]
WARNING, no entry stored in dbm for [ENSG00000276109.1]
WARNING, no entry stored in dbm for [ENSG00000244176.1]
WARNING, no entry stored in dbm for [ENSG00000273420.1]
WARNING, no entry stored in dbm for [ENSG00000286044.1]
WARNING, no entry stored in dbm for [ENSG00000282965.1]
WARNING, no entry stored in dbm for [ENSG00000280143.1]
WARNING, no entry stored in dbm for [ENSG00000284625.1]
WARNING, no entry stored in dbm for [ENSG00000273091.1]
WARNING, no entry stored in dbm for [ENSG00000248994.2]
WARNING, no entry stored in dbm for [ENSG00000203930.12]
WARNING, no entry stored in dbm for [ENSG00000231964.1]
WARNING, no entry stored in dbm for [ENSG00000270094.1]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000286198.1]
WARNING, no entry stored in dbm for [ENSG00000218426.5]
WARNING, no entry stored in dbm for [ENSG00000204802.3]
WARNING, no entry stored in dbm for [ENSG00000231212.1]
WARNING, no entry stored in dbm for [ENSG00000232295.7]
WARNING, no entry stored in dbm for [ENSG00000224848.2]
WARNING, no entry stored in dbm for [ENSG00000229021.2]
WARNING, no entry stored in dbm for [ENSG00000225886.3]
WARNING, no entry stored in dbm for [ENSG00000279592.1]
WARNING, no entry stored in dbm for [ENSG00000235020.5]
WARNING, no entry stored in dbm for [ENSG00000259865.1]
WARNING, no entry stored in dbm for [ENSG00000232347.1]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000260879.1]
WARNING, no entry stored in dbm for [ENSG00000230001.1]
WARNING, no entry stored in dbm for [ENSG00000257759.2]
WARNING, no entry stored in dbm for [ENSG00000257759.2]
WARNING, no entry stored in dbm for [ENSG00000258926.2]
WARNING, no entry stored in dbm for [ENSG00000203620.2]
WARNING, no entry stored in dbm for [ENSG00000287925.1]
WARNING, no entry stored in dbm for [ENSG00000288016.1]
WARNING, no entry stored in dbm for [ENSG00000231856.2]
WARNING, no entry stored in dbm for [ENSG00000288583.1]
WARNING, no entry stored in dbm for [ENSG00000287368.1]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000228436.3]
WARNING, no entry stored in dbm for [ENSG00000272449.2]
WARNING, no entry stored in dbm for [ENSG00000286285.1]
WARNING, no entry stored in dbm for [ENSG00000227240.2]
WARNING, no entry stored in dbm for [ENSG00000286071.1]
WARNING, no entry stored in dbm for [ENSG00000278416.1]
WARNING, no entry stored in dbm for [ENSG00000227579.6]
WARNING, no entry stored in dbm for [ENSG00000279286.2]
WARNING, no entry stored in dbm for [ENSG00000237481.1]
WARNING, no entry stored in dbm for [ENSG00000271335.6]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000231769.3]
WARNING, no entry stored in dbm for [ENSG00000213107.2]
WARNING, no entry stored in dbm for [ENSG00000256070.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000251136.9]
WARNING, no entry stored in dbm for [ENSG00000251136.9]
WARNING, no entry stored in dbm for [ENSG00000248692.5]
WARNING, no entry stored in dbm for [ENSG00000241684.6]
WARNING, no entry stored in dbm for [ENSG00000237017.1]
WARNING, no entry stored in dbm for [ENSG00000276216.1]
WARNING, no entry stored in dbm for [ENSG00000283453.2]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000281571.2]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000262831.1]
WARNING, no entry stored in dbm for [ENSG00000271973.1]
WARNING, no entry stored in dbm for [ENSG00000261760.8]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000259925.1]
WARNING, no entry stored in dbm for [ENSG00000214999.3]
WARNING, no entry stored in dbm for [ENSG00000283345.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000261924.1]
WARNING, no entry stored in dbm for [ENSG00000285668.1]
WARNING, no entry stored in dbm for [ENSG00000250899.3]
WARNING, no entry stored in dbm for [ENSG00000260832.1]
WARNING, no entry stored in dbm for [ENSG00000250461.1]
WARNING, no entry stored in dbm for [ENSG00000260710.1]
WARNING, no entry stored in dbm for [ENSG00000237961.4]
WARNING, no entry stored in dbm for [ENSG00000288105.1]
WARNING, no entry stored in dbm for [ENSG00000284675.1]
WARNING, no entry stored in dbm for [ENSG00000278791.1]
WARNING, no entry stored in dbm for [ENSG00000241473.1]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000287067.1]
WARNING, no entry stored in dbm for [ENSG00000225416.1]
WARNING, no entry stored in dbm for [ENSG00000226107.1]
WARNING, no entry stored in dbm for [ENSG00000225416.1]
WARNING, no entry stored in dbm for [ENSG00000242087.2]
WARNING, no entry stored in dbm for [ENSG00000225416.1]
WARNING, no entry stored in dbm for [ENSG00000227753.3]
WARNING, no entry stored in dbm for [ENSG00000242727.2]
WARNING, no entry stored in dbm for [ENSG00000255454.1]
WARNING, no entry stored in dbm for [ENSG00000231252.3]
WARNING, no entry stored in dbm for [ENSG00000279139.1]
WARNING, no entry stored in dbm for [ENSG00000277096.1]
WARNING, no entry stored in dbm for [ENSG00000280417.1]
WARNING, no entry stored in dbm for [ENSG00000224536.2]
WARNING, no entry stored in dbm for [ENSG00000279333.1]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000228303.1]
WARNING, no entry stored in dbm for [ENSG00000249741.2]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000259881.1]
WARNING, no entry stored in dbm for [ENSG00000240519.1]
WARNING, no entry stored in dbm for [ENSG00000238150.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000285077.2]
WARNING, no entry stored in dbm for [ENSG00000287042.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000254033.1]
WARNING, no entry stored in dbm for [ENSG00000286699.1]
WARNING, no entry stored in dbm for [ENSG00000266208.1]
WARNING, no entry stored in dbm for [ENSG00000272247.1]
WARNING, no entry stored in dbm for [ENSG00000284627.1]
WARNING, no entry stored in dbm for [ENSG00000257225.1]
WARNING, no entry stored in dbm for [ENSG00000287041.1]
WARNING, no entry stored in dbm for [ENSG00000261501.1]
WARNING, no entry stored in dbm for [ENSG00000254094.1]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000239985.2]
WARNING, no entry stored in dbm for [ENSG00000272693.4]
WARNING, no entry stored in dbm for [ENSG00000286493.1]
WARNING, no entry stored in dbm for [ENSG00000287388.1]
WARNING, no entry stored in dbm for [ENSG00000280331.1]
WARNING, no entry stored in dbm for [ENSG00000254951.7]
WARNING, no entry stored in dbm for [ENSG00000278621.1]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000260368.1]
WARNING, no entry stored in dbm for [ENSG00000267040.6]
WARNING, no entry stored in dbm for [ENSG00000224647.2]
WARNING, no entry stored in dbm for [ENSG00000249483.1]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000286193.2]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000250764.1]
WARNING, no entry stored in dbm for [ENSG00000280401.1]
WARNING, no entry stored in dbm for [ENSG00000268093.1]
WARNING, no entry stored in dbm for [ENSG00000268093.1]
WARNING, no entry stored in dbm for [ENSG00000267169.2]
WARNING, no entry stored in dbm for [ENSG00000268518.1]
WARNING, no entry stored in dbm for [ENSG00000263070.1]
WARNING, no entry stored in dbm for [ENSG00000229852.4]
WARNING, no entry stored in dbm for [ENSG00000229852.4]
WARNING, no entry stored in dbm for [ENSG00000229839.6]
WARNING, no entry stored in dbm for [ENSG00000213642.3]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000267707.2]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000264558.1]
WARNING, no entry stored in dbm for [ENSG00000261526.2]
WARNING, no entry stored in dbm for [ENSG00000261777.6]
WARNING, no entry stored in dbm for [ENSG00000227252.2]
WARNING, no entry stored in dbm for [ENSG00000286068.1]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000238004.1]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000249042.6]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000234259.3]
WARNING, no entry stored in dbm for [ENSG00000267009.6]
WARNING, no entry stored in dbm for [ENSG00000264421.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000218586.3]
WARNING, no entry stored in dbm for [ENSG00000278959.1]
WARNING, no entry stored in dbm for [ENSG00000246225.7]
WARNING, no entry stored in dbm for [ENSG00000267606.1]
WARNING, no entry stored in dbm for [ENSG00000236531.2]
WARNING, no entry stored in dbm for [ENSG00000226824.7]
WARNING, no entry stored in dbm for [ENSG00000232006.9]
WARNING, no entry stored in dbm for [ENSG00000256210.3]
WARNING, no entry stored in dbm for [ENSG00000248112.1]
WARNING, no entry stored in dbm for [ENSG00000226624.1]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000255319.5]
WARNING, no entry stored in dbm for [ENSG00000230137.1]
WARNING, no entry stored in dbm for [ENSG00000228204.2]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000234859.5]
WARNING, no entry stored in dbm for [ENSG00000235461.2]
WARNING, no entry stored in dbm for [ENSG00000232759.1]
WARNING, no entry stored in dbm for [ENSG00000267698.1]
WARNING, no entry stored in dbm for [ENSG00000224713.4]
WARNING, no entry stored in dbm for [ENSG00000287952.1]
WARNING, no entry stored in dbm for [ENSG00000251595.7]


	* STAR-Fusion complete.  See output: /tmp/nxf.uNDKPN7fPZ/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)