Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d0/34ad38f126bff1c488107fd46bc1b6/aih-tih-sc-835699-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/01/dbca21b62cdff358212f4798e51228/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/01/dbca21b62cdff358212f4798e51228/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory