Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/e596e51b4605b8c4b3753b43777c6a/aih-tih-sc-41b5f1-R1_A23WJ53LT4_1/aih-tih-sc-41b5f1-R1_A23WJ53LT4_1_full_basic_stats.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/0169ea696f8960a2ee5a9d65e67a72/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/0169ea696f8960a2ee5a9d65e67a72/.command.run
==> STAGING COMPLETE (3 inputs)

Processing SeqTools file: aih-tih-sc-41b5f1-R1_A23WJ53LT4_1_full_basic_stats.tsv
Warning: scipy not available. GC bias calculation will be simplified.
Successfully converted aih-tih-sc-41b5f1-R1_A23WJ53LT4_1_full_basic_stats.tsv to aih-tih-sc-41b5f1-R1_A23WJ53LT4_1_seqtool_mqc.tsv
  Samples: 1
  SeqTools (general stats) columns: 18
  Metrics: reads, frac_unmapped, frac_dupes, unique_reads, frac_reads_on_target, frac_pairs_on_target, frac_reads_off_target, frac_pairs_off_target, reads_on_target, pairs_on_target, reads_off_target, pairs_off_target, mean_depth, q50_depth, frac_bases_gt30x, frac_bases_gt100x, n_q30, gc_bias