Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/52983a7b8b44e17bfd4983e64af4a0/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/b118892a939ef3f5b1188399031feb/aih-tih-sc-284856-R1_A23WJ53LT4_1_2.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/52983a7b8b44e17bfd4983e64af4a0/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/b118892a939ef3f5b1188399031feb/aih-tih-sc-284856-R1_A23WJ53LT4_1_1.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/fadb7d9f9f7a1a2279e4b732a6186f/aih-tih-sc-284856-R1_A23WJ53LT4_1.Chimeric.out.junction ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.IOd3u6VPJq/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.IOd3u6VPJq/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary -sample contains 69211967 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.IOd3u6VPJq/ctat_genome_lib_build_dir -J /tmp/nxf.IOd3u6VPJq/aih-tih-sc-284856-R1_A23WJ53LT4_1.Chimeric.out.junction -O /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.IOd3u6VPJq/aih-tih-sc-284856-R1_A23WJ53LT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.IOd3u6VPJq/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=33333.33/min [20000], rate=40000.00/min [30000], rate=42857.14/min [40000], rate=42857.14/min [50000], rate=46875.00/min [60000], rate=48000.00/min [70000], rate=50000.00/min [80000], rate=51063.83/min [90000], rate=52941.18/min [100000], rate=54545.45/min [110000], rate=55000.00/min [120000], rate=54545.45/min [130000], rate=54545.45/min [140000], rate=54193.55/min [150000], rate=53892.22/min [160000], rate=53932.58/min [170000], rate=54255.32/min [180000], rate=55102.04/min [190000], rate=55609.76/min [200000], rate=56872.04/min [210000], rate=57272.73/min [220000], rate=55932.20/min [230000], rate=54980.08/min [240000], rate=54752.85/min [250000], rate=55147.06/min [260000], rate=55319.15/min [270000], rate=55862.07/min [280000], rate=56756.76/min [290000], rate=57615.89/min [300000], rate=58631.92/min [310000], rate=58490.57/min [320000], rate=58181.82/min [330000], rate=57894.74/min [340000], rate=57790.37/min [350000], rate=57851.24/min [360000], rate=58064.52/min [370000], rate=58730.16/min [380000], rate=59842.52/min [390000], rate=60779.22/min [400000], rate=61696.66/min [410000], rate=62595.42/min [420000], rate=63000.00/min [430000], rate=62926.83/min [440000], rate=62857.14/min [450000], rate=63084.11/min [460000], rate=63594.47/min [470000], rate=64090.91/min [480000], rate=64573.99/min [490000], rate=64757.71/min [500000], rate=64794.82/min [510000], rate=65106.38/min [520000], rate=65408.81/min [530000], rate=65975.10/min -building interval tree based on /tmp/nxf.IOd3u6VPJq/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=46153.85/min [20000], rate=57142.86/min [30000], rate=60000.00/min [40000], rate=52173.91/min [50000], rate=44776.12/min [60000], rate=41860.47/min [70000], rate=40776.70/min [80000], rate=39344.26/min [90000], rate=38571.43/min [100000], rate=39473.68/min [110000], rate=40243.90/min [120000], rate=41142.86/min [130000], rate=41269.84/min [140000], rate=41584.16/min [150000], rate=42452.83/min [160000], rate=44036.70/min [170000], rate=45535.71/min [180000], rate=46351.93/min [190000], rate=46913.58/min [200000], rate=47619.05/min [210000], rate=48461.54/min [220000], rate=49438.20/min [230000], rate=50549.45/min [240000], rate=51798.56/min [250000], rate=52816.90/min [260000], rate=53979.24/min [270000], rate=55102.04/min [280000], rate=56187.29/min [290000], rate=57049.18/min [300000], rate=57877.81/min [310000], rate=58675.08/min [320000], rate=59442.72/min [330000], rate=60000.00/min [340000], rate=60714.29/min [350000], rate=60518.73/min [360000], rate=59668.51/min [370000], rate=59200.00/min [380000], rate=58762.89/min [390000], rate=58500.00/min [400000], rate=58252.43/min [410000], rate=58432.30/min [420000], rate=58604.65/min [430000], rate=58904.11/min [440000], rate=59459.46/min [450000], rate=60000.00/min [460000], rate=60792.95/min [470000], rate=61437.91/min [480000], rate=61276.60/min [490000], rate=61250.00/min [500000], rate=61475.41/min [510000], rate=61818.18/min [520000], rate=62400.00/min [530000], rate=62352.94/min -building interval tree based on /tmp/nxf.IOd3u6VPJq/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.12 min). -mapping reads to genes [10000], rate=75000.00/min [20000], rate=75000.00/min [30000], rate=78260.87/min [40000], rate=82758.62/min [50000], rate=78947.37/min [60000], rate=69230.77/min [70000], rate=67741.94/min [80000], rate=68571.43/min [90000], rate=68354.43/min [100000], rate=72289.16/min [110000], rate=75862.07/min [120000], rate=72000.00/min [130000], rate=70909.09/min [140000], rate=70588.24/min [150000], rate=69767.44/min [160000], rate=71111.11/min [170000], rate=69387.76/min [180000], rate=66666.67/min [190000], rate=65142.86/min [200000], rate=64171.12/min [210000], rate=62686.57/min [220000], rate=61395.35/min [230000], rate=61607.14/min [240000], rate=61802.58/min [250000], rate=62240.66/min [260000], rate=63157.89/min [270000], rate=62790.70/min [280000], rate=60649.82/min [290000], rate=60000.00/min [300000], rate=59405.94/min [310000], rate=58675.08/min [320000], rate=58181.82/min [330000], rate=58407.08/min [340000], rate=58789.63/min [350000], rate=58988.76/min [360000], rate=59016.39/min [370000], rate=59358.29/min [380000], rate=60000.00/min [390000], rate=60465.12/min [400000], rate=61068.70/min [410000], rate=61654.14/min [420000], rate=62222.22/min [430000], rate=61870.50/min [440000], rate=60969.98/min [450000], rate=59866.96/min [460000], rate=59611.23/min [470000], rate=59243.70/min [480000], rate=59016.39/min [490000], rate=58682.63/min [500000], rate=58365.76/min [510000], rate=58396.95/min [520000], rate=58426.97/min [530000], rate=58671.59/min -building interval tree based on /tmp/nxf.IOd3u6VPJq/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.12 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=80000.00/min [30000], rate=85714.29/min [40000], rate=88888.89/min [50000], rate=88235.29/min [60000], rate=62068.97/min [70000], rate=49411.76/min [80000], rate=44036.70/min [90000], rate=40298.51/min [100000], rate=37974.68/min [110000], rate=36464.09/min [120000], rate=35820.90/min [130000], rate=35944.70/min [140000], rate=36363.64/min [150000], rate=36885.25/min [160000], rate=37500.00/min [170000], rate=37777.78/min [180000], rate=38297.87/min [190000], rate=38907.85/min [200000], rate=39473.68/min [210000], rate=40127.39/min [220000], rate=40740.74/min [230000], rate=41441.44/min [240000], rate=42228.74/min [250000], rate=43103.45/min [260000], rate=44192.63/min [270000], rate=44875.35/min [280000], rate=45283.02/min [290000], rate=45910.29/min [300000], rate=46511.63/min [310000], rate=46969.70/min [320000], rate=47642.68/min [330000], rate=48410.76/min [340000], rate=49156.63/min [350000], rate=48611.11/min [360000], rate=48000.00/min [370000], rate=47639.48/min [380000], rate=47500.00/min [390000], rate=47755.10/min [400000], rate=47904.19/min [410000], rate=47766.99/min [420000], rate=48091.60/min [430000], rate=48587.57/min [440000], rate=49162.01/min [450000], rate=49815.50/min [460000], rate=49729.73/min [470000], rate=49647.89/min [480000], rate=49655.17/min [490000], rate=49746.19/min [500000], rate=49833.89/min [510000], rate=50000.00/min [520000], rate=50241.55/min [530000], rate=50556.44/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.IOd3u6VPJq/ctat_genome_lib_build_dir --filt_file /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 3000000.00 reads per min processed... 3000000.00 reads per min processed... 3000000.00 reads per min processed... 2666666.67 reads per min processed... 2727272.73 reads per min processed... 2571428.57 reads per min processed... 2625000.00 reads per min processed... 2666666.67 reads per min processed... 2700000.00 reads per min processed... 2857142.86 reads per min processed... 2869565.22 reads per min processed... 2769230.77 reads per min processed... 2785714.29 reads per min processed... 2800000.00 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.IOd3u6VPJq/aih-tih-sc-284856-R1_A23WJ53LT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.IOd3u6VPJq/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -195321.733451 EM: Round [1] log likelihood: -195253.390927 EM: Round [2] log likelihood: -195230.660255 EM: Round [3] log likelihood: -195220.541732 EM: Round [4] log likelihood: -195215.412710 EM: Round [5] log likelihood: -195212.571701 EM: Round [6] log likelihood: -195210.881745 EM: Round [7] log likelihood: -195209.812041 EM: Round [8] log likelihood: -195209.096570 EM: Round [9] log likelihood: -195208.594411 EM: Round [10] log likelihood: -195208.227205 EM: Round [11] log likelihood: -195207.949368 EM: Round [12] log likelihood: -195207.733201 EM: Round [13] log likelihood: -195207.561164 EM: Round [14] log likelihood: -195207.421703 EM: Round [15] log likelihood: -195207.306930 EM: Round [16] log likelihood: -195207.211286 EM: Round [17] log likelihood: -195207.130738 EM: Round [18] log likelihood: -195207.062293 EM: Round [19] log likelihood: -195207.003676 EM: Round [20] log likelihood: -195206.953133 EM: Round [21] log likelihood: -195206.909284 EM: Round [22] log likelihood: -195206.871035 EM: Round [23] log likelihood: -195206.837505 EM: Round [24] log likelihood: -195206.807977 EM: Round [25] log likelihood: -195206.781864 EM: Round [26] log likelihood: -195206.758681 EM: Round [27] log likelihood: -195206.738025 EM: Round [28] log likelihood: -195206.719558 EM: Round [29] log likelihood: -195206.702995 EM: Round [30] log likelihood: -195206.688096 EM: Round [31] log likelihood: -195206.674656 EM: Round [32] log likelihood: -195206.662500 EM: Round [33] log likelihood: -195206.651478 EM: Round [34] log likelihood: -195206.641462 EM: Round [35] log likelihood: -195206.632339 EM: Round [36] log likelihood: -195206.624013 EM: Round [37] log likelihood: -195206.616400 EM: Round [38] log likelihood: -195206.609426 EM: Round [39] log likelihood: -195206.603027 EM: Round [40] log likelihood: -195206.597146 EM: Round [41] log likelihood: -195206.591733 EM: Round [42] log likelihood: -195206.586745 EM: Round [43] log likelihood: -195206.582141 EM: Round [44] log likelihood: -195206.577888 EM: Round [45] log likelihood: -195206.573955 EM: Round [46] log likelihood: -195206.570312 EM: Round [47] log likelihood: -195206.566937 EM: Round [48] log likelihood: -195206.563806 EM: Round [49] log likelihood: -195206.560900 EM: Round [50] log likelihood: -195206.558200 EM: Round [51] log likelihood: -195206.555689 EM: Round [52] log likelihood: -195206.553354 EM: Round [53] log likelihood: -195206.551180 EM: Round [54] log likelihood: -195206.549155 EM: Round [55] log likelihood: -195206.547268 EM: Round [56] log likelihood: -195206.545508 EM: Round [57] log likelihood: -195206.543867 EM: Round [58] log likelihood: -195206.542335 EM: Round [59] log likelihood: -195206.540905 EM: Round [60] log likelihood: -195206.539569 EM: Round [61] log likelihood: -195206.538321 EM: Round [62] log likelihood: -195206.537155 EM: Round [63] log likelihood: -195206.536065 EM: Round [64] log likelihood: -195206.535045 EM: Round [65] log likelihood: -195206.534092 EM: Round [66] log likelihood: -195206.533199 EM: Round [67] log likelihood: -195206.532364 EM: Round [68] log likelihood: -195206.531583 EM: Round [69] log likelihood: -195206.530851 EM: Round [70] log likelihood: -195206.530166 EM: Round [71] log likelihood: -195206.529524 EM: Round [72] log likelihood: -195206.528922 EM: Round [73] log likelihood: -195206.528359 EM: Round [74] log likelihood: -195206.527831 EM: Round [75] log likelihood: -195206.527336 EM: Round [76] log likelihood: -195206.526872 EM: Round [77] log likelihood: -195206.526437 EM: Round [78] log likelihood: -195206.526030 EM: Round [79] log likelihood: -195206.525647 EM: Round [80] log likelihood: -195206.525289 EM: Round [81] log likelihood: -195206.524952 EM: Round [82] log likelihood: -195206.524637 EM: Round [83] log likelihood: -195206.524341 EM: Round [84] log likelihood: -195206.524063 EM: Round [85] log likelihood: -195206.523803 EM: Round [86] log likelihood: -195206.523558 EM: Round [87] log likelihood: -195206.523329 EM: Round [88] log likelihood: -195206.523113 EM: Round [89] log likelihood: -195206.522911 EM: Round [90] log likelihood: -195206.522721 EM: Round [91] log likelihood: -195206.522543 EM: Round [92] log likelihood: -195206.522376 EM: Round [93] log likelihood: -195206.522218 EM: Round [94] log likelihood: -195206.522071 EM: Round [95] log likelihood: -195206.521932 EM: Round [96] log likelihood: -195206.521802 EM: Round [97] log likelihood: -195206.521680 EM: Round [98] log likelihood: -195206.521565 EM: Round [99] log likelihood: -195206.521458 EM: Round [100] log likelihood: -195206.521356 EM: Round [101] log likelihood: -195206.521261 EM: Stopping iterations at round 101 due to insufficient improvement in likelihood. EM: Starting log likelihood: -194872.339100 EM: Round [1] log likelihood: -194814.854058 EM: Round [2] log likelihood: -194795.236132 EM: Round [3] log likelihood: -194786.545750 EM: Round [4] log likelihood: -194782.188750 EM: Round [5] log likelihood: -194779.811138 EM: Round [6] log likelihood: -194778.421645 EM: Round [7] log likelihood: -194777.559369 EM: Round [8] log likelihood: -194776.994749 EM: Round [9] log likelihood: -194776.607067 EM: Round [10] log likelihood: -194776.329766 EM: Round [11] log likelihood: -194776.124498 EM: Round [12] log likelihood: -194775.968208 EM: Round [13] log likelihood: -194775.846458 EM: Round [14] log likelihood: -194775.749848 EM: Round [15] log likelihood: -194775.672031 EM: Round [16] log likelihood: -194775.608582 EM: Round [17] log likelihood: -194775.556325 EM: Round [18] log likelihood: -194775.512922 EM: Round [19] log likelihood: -194775.476615 EM: Round [20] log likelihood: -194775.446058 EM: Round [21] log likelihood: -194775.420202 EM: Round [22] log likelihood: -194775.398221 EM: Round [23] log likelihood: -194775.379455 EM: Round [24] log likelihood: -194775.363372 EM: Round [25] log likelihood: -194775.349541 EM: Round [26] log likelihood: -194775.337608 EM: Round [27] log likelihood: -194775.327280 EM: Round [28] log likelihood: -194775.318318 EM: Round [29] log likelihood: -194775.310518 EM: Round [30] log likelihood: -194775.303714 EM: Round [31] log likelihood: -194775.297763 EM: Round [32] log likelihood: -194775.292546 EM: Round [33] log likelihood: -194775.287963 EM: Round [34] log likelihood: -194775.283927 EM: Round [35] log likelihood: -194775.280366 EM: Round [36] log likelihood: -194775.277217 EM: Round [37] log likelihood: -194775.274428 EM: Round [38] log likelihood: -194775.271953 EM: Round [39] log likelihood: -194775.269752 EM: Round [40] log likelihood: -194775.267792 EM: Round [41] log likelihood: -194775.266044 EM: Round [42] log likelihood: -194775.264482 EM: Round [43] log likelihood: -194775.263084 EM: Round [44] log likelihood: -194775.261831 EM: Round [45] log likelihood: -194775.260707 EM: Round [46] log likelihood: -194775.259697 EM: Round [47] log likelihood: -194775.258788 EM: Round [48] log likelihood: -194775.257970 EM: Round [49] log likelihood: -194775.257232 EM: Round [50] log likelihood: -194775.256566 EM: Round [51] log likelihood: -194775.255964 EM: Round [52] log likelihood: -194775.255420 EM: Round [53] log likelihood: -194775.254927 EM: Round [54] log likelihood: -194775.254481 EM: Round [55] log likelihood: -194775.254077 EM: Round [56] log likelihood: -194775.253710 EM: Round [57] log likelihood: -194775.253376 EM: Round [58] log likelihood: -194775.253074 EM: Round [59] log likelihood: -194775.252799 EM: Round [60] log likelihood: -194775.252548 EM: Round [61] log likelihood: -194775.252321 EM: Round [62] log likelihood: -194775.252113 EM: Round [63] log likelihood: -194775.251924 EM: Round [64] log likelihood: -194775.251752 EM: Round [65] log likelihood: -194775.251595 EM: Round [66] log likelihood: -194775.251452 EM: Round [67] log likelihood: -194775.251322 EM: Round [68] log likelihood: -194775.251203 EM: Round [69] log likelihood: -194775.251094 EM: Round [70] log likelihood: -194775.250995 EM: Stopping iterations at round 70 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.IOd3u6VPJq/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.IOd3u6VPJq/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.IOd3u6VPJq/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 69211967 > /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.IOd3u6VPJq/ctat_genome_lib_build_dir > /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.IOd3u6VPJq/ctat_genome_lib_build_dir --annotate /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.IOd3u6VPJq/ctat_genome_lib_build_dir -done, see /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.IOd3u6VPJq/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 2615, filtered: 9132) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.IOd3u6VPJq/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.IOd3u6VPJq/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000242808.10] WARNING, no entry stored in dbm for [ENSG00000249375.8] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000225689.2] WARNING, no entry stored in dbm for [ENSG00000227621.1] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000078319.10] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000279973.2] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000265018.6] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000233836.7] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000243289.1] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000284977.2] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000078319.10] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000273118.1] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000229167.2] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000249859.12] WARNING, no entry stored in dbm for [ENSG00000234420.7] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000078319.10] WARNING, no entry stored in dbm for [ENSG00000226240.2] WARNING, no entry stored in dbm for [ENSG00000255052.5] WARNING, no entry stored in dbm for [ENSG00000254016.3] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000282057.1] WARNING, no entry stored in dbm for [ENSG00000240057.6] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000225594.1] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [ENSG00000245958.6] WARNING, no entry stored in dbm for [ENSG00000278834.1] WARNING, no entry stored in dbm for [ENSG00000258853.1] WARNING, no entry stored in dbm for [ENSG00000259240.1] WARNING, no entry stored in dbm for [ENSG00000279973.2] WARNING, no entry stored in dbm for [ENSG00000285051.2] WARNING, no entry stored in dbm for [ENSG00000187172.15] WARNING, no entry stored in dbm for [ENSG00000235857.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000286830.1] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000272693.4] WARNING, no entry stored in dbm for [ENSG00000277977.1] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [ENSG00000188185.13] WARNING, no entry stored in dbm for [ENSG00000234911.2] WARNING, no entry stored in dbm for [ENSG00000259341.2] WARNING, no entry stored in dbm for [ENSG00000262801.6] WARNING, no entry stored in dbm for [ENSG00000213178.3] WARNING, no entry stored in dbm for [ENSG00000218300.1] WARNING, no entry stored in dbm for [ENSG00000231259.5] WARNING, no entry stored in dbm for [ENSG00000213250.5] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000078319.10] WARNING, no entry stored in dbm for [ENSG00000078319.10] WARNING, no entry stored in dbm for [ENSG00000256751.6] WARNING, no entry stored in dbm for [ENSG00000284428.1] WARNING, no entry stored in dbm for [ENSG00000276758.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000227733.10] WARNING, no entry stored in dbm for [ENSG00000226312.7] WARNING, no entry stored in dbm for [ENSG00000249395.4] WARNING, no entry stored in dbm for [ENSG00000254238.1] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000271699.5] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000234426.3] WARNING, no entry stored in dbm for [ENSG00000288543.1] WARNING, no entry stored in dbm for [ENSG00000236740.6] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000226780.1] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000274423.1] WARNING, no entry stored in dbm for [ENSG00000184115.17] WARNING, no entry stored in dbm for [ENSG00000287129.1] WARNING, no entry stored in dbm for [ENSG00000231646.6] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000267198.1] WARNING, no entry stored in dbm for [ENSG00000131484.4] WARNING, no entry stored in dbm for [ENSG00000234129.8] WARNING, no entry stored in dbm for [ENSG00000234129.8] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000274712.2] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000214189.9] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000255686.1] WARNING, no entry stored in dbm for [ENSG00000233527.9] WARNING, no entry stored in dbm for [ENSG00000277977.1] WARNING, no entry stored in dbm for [ENSG00000215498.9] WARNING, no entry stored in dbm for [ENSG00000230565.1] WARNING, no entry stored in dbm for [ENSG00000233509.2] WARNING, no entry stored in dbm for [ENSG00000226674.11] WARNING, no entry stored in dbm for [ENSG00000250490.1] WARNING, no entry stored in dbm for [ENSG00000226471.6] WARNING, no entry stored in dbm for [ENSG00000239521.9] WARNING, no entry stored in dbm for [ENSG00000228801.6] WARNING, no entry stored in dbm for [ENSG00000279971.1] WARNING, no entry stored in dbm for [ENSG00000255282.6] WARNING, no entry stored in dbm for [ENSG00000206344.7] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000189136.9] WARNING, no entry stored in dbm for [ENSG00000224812.3] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000261069.3] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000260653.6] WARNING, no entry stored in dbm for [ENSG00000287808.1] WARNING, no entry stored in dbm for [ENSG00000254584.2] WARNING, no entry stored in dbm for [ENSG00000229036.7] WARNING, no entry stored in dbm for [ENSG00000265018.6] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000197320.5] WARNING, no entry stored in dbm for [ENSG00000242435.1] WARNING, no entry stored in dbm for [ENSG00000279770.1] WARNING, no entry stored in dbm for [ENSG00000261126.7] WARNING, no entry stored in dbm for [ENSG00000237298.10] WARNING, no entry stored in dbm for [ENSG00000227182.1] WARNING, no entry stored in dbm for [ENSG00000235782.1] WARNING, no entry stored in dbm for [ENSG00000237264.4] WARNING, no entry stored in dbm for [ENSG00000225096.3] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000180438.15] WARNING, no entry stored in dbm for [ENSG00000229124.7] WARNING, no entry stored in dbm for [ENSG00000247556.6] WARNING, no entry stored in dbm for [ENSG00000232600.3] WARNING, no entry stored in dbm for [ENSG00000234996.4] WARNING, no entry stored in dbm for [ENSG00000231672.8] WARNING, no entry stored in dbm for [ENSG00000279758.1] WARNING, no entry stored in dbm for [ENSG00000237590.1] WARNING, no entry stored in dbm for [ENSG00000259343.7] WARNING, no entry stored in dbm for [ENSG00000267559.5] WARNING, no entry stored in dbm for [ENSG00000214559.3] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000241163.8] WARNING, no entry stored in dbm for [ENSG00000267280.5] WARNING, no entry stored in dbm for [ENSG00000214081.8] WARNING, no entry stored in dbm for [ENSG00000128438.10] WARNING, no entry stored in dbm for [ENSG00000271576.1] WARNING, no entry stored in dbm for [ENSG00000242951.1] WARNING, no entry stored in dbm for [ENSG00000264538.6] WARNING, no entry stored in dbm for [ENSG00000241316.8] WARNING, no entry stored in dbm for [ENSG00000241316.8] WARNING, no entry stored in dbm for [ENSG00000247708.8] WARNING, no entry stored in dbm for [ENSG00000247708.8] WARNING, no entry stored in dbm for [ENSG00000276868.1] WARNING, no entry stored in dbm for [ENSG00000204685.7] WARNING, no entry stored in dbm for [ENSG00000285923.1] WARNING, no entry stored in dbm for [ENSG00000282572.2] WARNING, no entry stored in dbm for [ENSG00000227769.7] WARNING, no entry stored in dbm for [ENSG00000287367.1] WARNING, no entry stored in dbm for [ENSG00000226453.2] WARNING, no entry stored in dbm for [ENSG00000206120.11] WARNING, no entry stored in dbm for [ENSG00000219736.1] WARNING, no entry stored in dbm for [ENSG00000203875.13] WARNING, no entry stored in dbm for [ENSG00000175061.18] WARNING, no entry stored in dbm for [ENSG00000255717.7] WARNING, no entry stored in dbm for [ENSG00000259341.2] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000225689.2] WARNING, no entry stored in dbm for [ENSG00000254530.2] WARNING, no entry stored in dbm for [ENSG00000266828.2] WARNING, no entry stored in dbm for [ENSG00000260727.2] WARNING, no entry stored in dbm for [ENSG00000224081.9] WARNING, no entry stored in dbm for [ENSG00000272556.2] WARNING, no entry stored in dbm for [ENSG00000269316.1] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000272578.5] WARNING, no entry stored in dbm for [ENSG00000237307.2] WARNING, no entry stored in dbm for [ENSG00000231234.2] WARNING, no entry stored in dbm for [ENSG00000213468.7] WARNING, no entry stored in dbm for [ENSG00000282924.1] WARNING, no entry stored in dbm for [ENSG00000259362.2] WARNING, no entry stored in dbm for [ENSG00000180525.13] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000185986.12] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000229386.3] WARNING, no entry stored in dbm for [ENSG00000230592.2] WARNING, no entry stored in dbm for [ENSG00000257621.8] WARNING, no entry stored in dbm for [ENSG00000225482.1] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000240983.1] WARNING, no entry stored in dbm for [ENSG00000267790.1] WARNING, no entry stored in dbm for [ENSG00000242445.1] WARNING, no entry stored in dbm for [ENSG00000226448.1] WARNING, no entry stored in dbm for [ENSG00000229235.1] WARNING, no entry stored in dbm for [ENSG00000242945.2] WARNING, no entry stored in dbm for [ENSG00000239215.1] WARNING, no entry stored in dbm for [ENSG00000233836.7] WARNING, no entry stored in dbm for [ENSG00000229824.1] WARNING, no entry stored in dbm for [ENSG00000239627.3] WARNING, no entry stored in dbm for [ENSG00000206888.1] WARNING, no entry stored in dbm for [ENSG00000244701.1] WARNING, no entry stored in dbm for [ENSG00000200296.1] WARNING, no entry stored in dbm for [ENSG00000248161.5] WARNING, no entry stored in dbm for [ENSG00000215819.3] WARNING, no entry stored in dbm for [ENSG00000229727.7] WARNING, no entry stored in dbm for [ENSG00000237149.5] WARNING, no entry stored in dbm for [ENSG00000269904.2] WARNING, no entry stored in dbm for [ENSG00000185485.14] WARNING, no entry stored in dbm for [ENSG00000230556.1] WARNING, no entry stored in dbm for [ENSG00000233836.7] WARNING, no entry stored in dbm for [ENSG00000197291.9] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000270098.1] WARNING, no entry stored in dbm for [ENSG00000235892.1] WARNING, no entry stored in dbm for [ENSG00000248515.2] WARNING, no entry stored in dbm for [ENSG00000228793.2] WARNING, no entry stored in dbm for [ENSG00000228793.2] WARNING, no entry stored in dbm for [ENSG00000249859.12] WARNING, no entry stored in dbm for [ENSG00000249859.12] WARNING, no entry stored in dbm for [ENSG00000229956.11] WARNING, no entry stored in dbm for [ENSG00000231236.2] WARNING, no entry stored in dbm for [ENSG00000180229.12] WARNING, no entry stored in dbm for [ENSG00000232233.1] WARNING, no entry stored in dbm for [ENSG00000203739.4] WARNING, no entry stored in dbm for [ENSG00000226221.1] WARNING, no entry stored in dbm for [ENSG00000228940.1] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000078319.10] WARNING, no entry stored in dbm for [ENSG00000078319.10] WARNING, no entry stored in dbm for [ENSG00000214176.9] WARNING, no entry stored in dbm for [ENSG00000280025.1] WARNING, no entry stored in dbm for [ENSG00000228759.1] WARNING, no entry stored in dbm for [ENSG00000227455.3] WARNING, no entry stored in dbm for [ENSG00000261584.1] WARNING, no entry stored in dbm for [ENSG00000255185.6] WARNING, no entry stored in dbm for [ENSG00000275131.3] WARNING, no entry stored in dbm for [ENSG00000254539.1] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000251182.2] WARNING, no entry stored in dbm for [ENSG00000214106.9] WARNING, no entry stored in dbm for [ENSG00000189223.15] WARNING, no entry stored in dbm for [ENSG00000239883.8] WARNING, no entry stored in dbm for [ENSG00000162913.10] WARNING, no entry stored in dbm for [ENSG00000287262.1] WARNING, no entry stored in dbm for [ENSG00000246082.2] WARNING, no entry stored in dbm for [ENSG00000258343.2] WARNING, no entry stored in dbm for [ENSG00000223705.9] WARNING, no entry stored in dbm for [ENSG00000286957.1] WARNING, no entry stored in dbm for [ENSG00000259275.4] WARNING, no entry stored in dbm for [ENSG00000214807.2] WARNING, no entry stored in dbm for [ENSG00000226703.1] WARNING, no entry stored in dbm for [ENSG00000259673.6] WARNING, no entry stored in dbm for [ENSG00000201035.1] WARNING, no entry stored in dbm for [ENSG00000285776.1] WARNING, no entry stored in dbm for [ENSG00000234226.5] WARNING, no entry stored in dbm for [ENSG00000206337.12] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000249752.1] WARNING, no entry stored in dbm for [ENSG00000227499.1] WARNING, no entry stored in dbm for [ENSG00000233987.2] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000240677.1] WARNING, no entry stored in dbm for [ENSG00000228323.2] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000231889.7] WARNING, no entry stored in dbm for [ENSG00000255986.6] WARNING, no entry stored in dbm for [ENSG00000286953.1] WARNING, no entry stored in dbm for [ENSG00000215386.13] WARNING, no entry stored in dbm for [ENSG00000259240.1] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000234231.4] WARNING, no entry stored in dbm for [ENSG00000224184.6] WARNING, no entry stored in dbm for [ENSG00000264462.1] WARNING, no entry stored in dbm for [ENSG00000233325.3] WARNING, no entry stored in dbm for [ENSG00000271820.1] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000242600.8] WARNING, no entry stored in dbm for [ENSG00000281849.3] WARNING, no entry stored in dbm for [ENSG00000253320.7] WARNING, no entry stored in dbm for [ENSG00000275716.1] WARNING, no entry stored in dbm for [ENSG00000279387.1] WARNING, no entry stored in dbm for [ENSG00000266248.1] WARNING, no entry stored in dbm for [ENSG00000240032.1] WARNING, no entry stored in dbm for [ENSG00000251513.2] WARNING, no entry stored in dbm for [ENSG00000246876.7] WARNING, no entry stored in dbm for [ENSG00000255760.2] WARNING, no entry stored in dbm for [ENSG00000248300.1] WARNING, no entry stored in dbm for [ENSG00000286733.1] WARNING, no entry stored in dbm for [ENSG00000238042.5] WARNING, no entry stored in dbm for [ENSG00000204650.14] WARNING, no entry stored in dbm for [ENSG00000253417.5] WARNING, no entry stored in dbm for [ENSG00000272690.6] WARNING, no entry stored in dbm for [ENSG00000198685.4] WARNING, no entry stored in dbm for [ENSG00000198685.4] WARNING, no entry stored in dbm for [ENSG00000225434.3] WARNING, no entry stored in dbm for [ENSG00000237491.10] WARNING, no entry stored in dbm for [ENSG00000229891.2] WARNING, no entry stored in dbm for [ENSG00000228393.4] WARNING, no entry stored in dbm for [ENSG00000235703.6] WARNING, no entry stored in dbm for [ENSG00000224914.4] WARNING, no entry stored in dbm for [ENSG00000225269.3] WARNING, no entry stored in dbm for [ENSG00000225269.3] WARNING, no entry stored in dbm for [ENSG00000232677.9] WARNING, no entry stored in dbm for [ENSG00000237945.7] WARNING, no entry stored in dbm for [ENSG00000250682.6] WARNING, no entry stored in dbm for [ENSG00000227336.1] WARNING, no entry stored in dbm for [ENSG00000231721.7] WARNING, no entry stored in dbm for [ENSG00000226696.6] WARNING, no entry stored in dbm for [ENSG00000280118.3] WARNING, no entry stored in dbm for [ENSG00000135477.11] WARNING, no entry stored in dbm for [ENSG00000135477.11] WARNING, no entry stored in dbm for [ENSG00000135477.11] WARNING, no entry stored in dbm for [ENSG00000239569.3] WARNING, no entry stored in dbm for [ENSG00000251187.5] WARNING, no entry stored in dbm for [ENSG00000234684.7] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000237978.6] WARNING, no entry stored in dbm for [ENSG00000237978.6] WARNING, no entry stored in dbm for [ENSG00000230366.9] WARNING, no entry stored in dbm for [ENSG00000266931.2] WARNING, no entry stored in dbm for [ENSG00000225470.8] WARNING, no entry stored in dbm for [ENSG00000267924.1] WARNING, no entry stored in dbm for [ENSG00000235978.6] WARNING, no entry stored in dbm for [ENSG00000255240.6] WARNING, no entry stored in dbm for [ENSG00000251008.1] WARNING, no entry stored in dbm for [ENSG00000165874.13] WARNING, no entry stored in dbm for [ENSG00000227733.10] WARNING, no entry stored in dbm for [ENSG00000253521.2] WARNING, no entry stored in dbm for [ENSG00000213300.5] WARNING, no entry stored in dbm for [ENSG00000213468.7] WARNING, no entry stored in dbm for [ENSG00000204622.11] WARNING, no entry stored in dbm for [ENSG00000276550.4] WARNING, no entry stored in dbm for [ENSG00000231365.6] WARNING, no entry stored in dbm for [ENSG00000237125.11] WARNING, no entry stored in dbm for [ENSG00000241549.8] WARNING, no entry stored in dbm for [ENSG00000253816.3] WARNING, no entry stored in dbm for [ENSG00000253816.3] WARNING, no entry stored in dbm for [ENSG00000257746.2] WARNING, no entry stored in dbm for [ENSG00000183666.17] WARNING, no entry stored in dbm for [ENSG00000183666.17] WARNING, no entry stored in dbm for [ENSG00000227038.3] WARNING, no entry stored in dbm for [ENSG00000230189.7] WARNING, no entry stored in dbm for [ENSG00000230295.1] WARNING, no entry stored in dbm for [ENSG00000232546.1] WARNING, no entry stored in dbm for [ENSG00000272645.3] WARNING, no entry stored in dbm for [ENSG00000247498.10] WARNING, no entry stored in dbm for [ENSG00000166104.15] WARNING, no entry stored in dbm for [ENSG00000234016.1] WARNING, no entry stored in dbm for [ENSG00000182625.3] WARNING, no entry stored in dbm for [ENSG00000228824.7] WARNING, no entry stored in dbm for [ENSG00000267348.3] WARNING, no entry stored in dbm for [ENSG00000249346.7] WARNING, no entry stored in dbm for [ENSG00000254226.6] WARNING, no entry stored in dbm for [ENSG00000106133.18] WARNING, no entry stored in dbm for [ENSG00000255471.1] WARNING, no entry stored in dbm for [ENSG00000275131.3] WARNING, no entry stored in dbm for [ENSG00000200156.1] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000235575.1] WARNING, no entry stored in dbm for [ENSG00000224209.8] WARNING, no entry stored in dbm for [ENSG00000246223.9] WARNING, no entry stored in dbm for [ENSG00000226067.7] WARNING, no entry stored in dbm for [ENSG00000233064.2] WARNING, no entry stored in dbm for [ENSG00000203865.11] WARNING, no entry stored in dbm for [ENSG00000226777.7] WARNING, no entry stored in dbm for [ENSG00000167798.17] WARNING, no entry stored in dbm for [ENSG00000254146.1] WARNING, no entry stored in dbm for [ENSG00000239665.8] WARNING, no entry stored in dbm for [ENSG00000250332.1] WARNING, no entry stored in dbm for [ENSG00000256075.1] WARNING, no entry stored in dbm for [ENSG00000241684.6] WARNING, no entry stored in dbm for [ENSG00000230088.1] WARNING, no entry stored in dbm for [ENSG00000269514.3] WARNING, no entry stored in dbm for [ENSG00000234152.1] WARNING, no entry stored in dbm for [ENSG00000256625.1] WARNING, no entry stored in dbm for [ENSG00000214765.8] WARNING, no entry stored in dbm for [ENSG00000213252.3] WARNING, no entry stored in dbm for [ENSG00000184029.9] WARNING, no entry stored in dbm for [ENSG00000227803.2] WARNING, no entry stored in dbm for [ENSG00000288663.1] WARNING, no entry stored in dbm for [ENSG00000232907.8] WARNING, no entry stored in dbm for [ENSG00000177337.8] WARNING, no entry stored in dbm for [ENSG00000231607.13] WARNING, no entry stored in dbm for [ENSG00000176124.15] WARNING, no entry stored in dbm for [ENSG00000259848.9] WARNING, no entry stored in dbm for [ENSG00000254275.6] WARNING, no entry stored in dbm for [ENSG00000237883.2] WARNING, no entry stored in dbm for [ENSG00000235244.4] WARNING, no entry stored in dbm for [ENSG00000253993.1] WARNING, no entry stored in dbm for [ENSG00000269516.6] WARNING, no entry stored in dbm for [ENSG00000228237.5] WARNING, no entry stored in dbm for [ENSG00000154198.14] WARNING, no entry stored in dbm for [ENSG00000232973.13] WARNING, no entry stored in dbm for [ENSG00000244053.1] WARNING, no entry stored in dbm for [ENSG00000258231.5] WARNING, no entry stored in dbm for [ENSG00000236948.2] WARNING, no entry stored in dbm for [ENSG00000268287.1] WARNING, no entry stored in dbm for [ENSG00000236008.3] WARNING, no entry stored in dbm for [ENSG00000271711.1] WARNING, no entry stored in dbm for [ENSG00000100058.12] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000278932.4] WARNING, no entry stored in dbm for [ENSG00000250111.3] WARNING, no entry stored in dbm for [ENSG00000236991.6] WARNING, no entry stored in dbm for [ENSG00000245651.3] WARNING, no entry stored in dbm for [ENSG00000251339.6] WARNING, no entry stored in dbm for [ENSG00000256594.8] WARNING, no entry stored in dbm for [ENSG00000285051.2] WARNING, no entry stored in dbm for [ENSG00000244738.1] WARNING, no entry stored in dbm for [ENSG00000259755.1] WARNING, no entry stored in dbm for [ENSG00000223960.7] WARNING, no entry stored in dbm for [ENSG00000272068.1] WARNING, no entry stored in dbm for [ENSG00000285972.1] WARNING, no entry stored in dbm for [ENSG00000163098.6] WARNING, no entry stored in dbm for [ENSG00000265460.6] WARNING, no entry stored in dbm for [ENSG00000223559.1] WARNING, no entry stored in dbm for [ENSG00000203650.9] WARNING, no entry stored in dbm for [ENSG00000238184.1] WARNING, no entry stored in dbm for [ENSG00000276744.1] WARNING, no entry stored in dbm for [ENSG00000249917.3] WARNING, no entry stored in dbm for [ENSG00000249395.4] WARNING, no entry stored in dbm for [ENSG00000254238.1] WARNING, no entry stored in dbm for [ENSG00000267080.6] WARNING, no entry stored in dbm for [ENSG00000260942.1] WARNING, no entry stored in dbm for [ENSG00000229043.3] WARNING, no entry stored in dbm for [ENSG00000229097.1] WARNING, no entry stored in dbm for [ENSG00000225670.4] WARNING, no entry stored in dbm for [ENSG00000178722.13] WARNING, no entry stored in dbm for [ENSG00000178722.13] WARNING, no entry stored in dbm for [ENSG00000188511.12] WARNING, no entry stored in dbm for [ENSG00000261645.7] WARNING, no entry stored in dbm for [ENSG00000231424.3] WARNING, no entry stored in dbm for [ENSG00000230131.6] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000279022.1] WARNING, no entry stored in dbm for [ENSG00000254560.6] WARNING, no entry stored in dbm for [ENSG00000279021.1] WARNING, no entry stored in dbm for [ENSG00000263934.5] WARNING, no entry stored in dbm for [ENSG00000257777.1] WARNING, no entry stored in dbm for [ENSG00000201315.1] WARNING, no entry stored in dbm for [ENSG00000173209.23] WARNING, no entry stored in dbm for [ENSG00000244675.2] WARNING, no entry stored in dbm for [ENSG00000244198.7] WARNING, no entry stored in dbm for [ENSG00000204959.4] WARNING, no entry stored in dbm for [ENSG00000243069.8] WARNING, no entry stored in dbm for [ENSG00000231290.6] WARNING, no entry stored in dbm for [ENSG00000237975.7] WARNING, no entry stored in dbm for [ENSG00000264235.6] WARNING, no entry stored in dbm for [ENSG00000277693.2] WARNING, no entry stored in dbm for [ENSG00000256591.5] WARNING, no entry stored in dbm for [ENSG00000224905.7] WARNING, no entry stored in dbm for [ENSG00000266456.1] WARNING, no entry stored in dbm for [ENSG00000267108.1] WARNING, no entry stored in dbm for [ENSG00000246889.2] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000215067.10] WARNING, no entry stored in dbm for [ENSG00000248671.8] WARNING, no entry stored in dbm for [ENSG00000258704.6] WARNING, no entry stored in dbm for [ENSG00000227896.2] WARNING, no entry stored in dbm for [ENSG00000225087.2] WARNING, no entry stored in dbm for [ENSG00000287811.1] WARNING, no entry stored in dbm for [ENSG00000275285.1] WARNING, no entry stored in dbm for [ENSG00000275285.1] WARNING, no entry stored in dbm for [ENSG00000235749.3] WARNING, no entry stored in dbm for [ENSG00000228685.1] WARNING, no entry stored in dbm for [ENSG00000234851.4] WARNING, no entry stored in dbm for [ENSG00000270171.1] WARNING, no entry stored in dbm for [ENSG00000246203.2] WARNING, no entry stored in dbm for [ENSG00000286699.1] WARNING, no entry stored in dbm for [ENSG00000204055.5] WARNING, no entry stored in dbm for [ENSG00000234996.4] WARNING, no entry stored in dbm for [ENSG00000285257.1] WARNING, no entry stored in dbm for [ENSG00000197670.6] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000279306.1] WARNING, no entry stored in dbm for [ENSG00000231563.2] WARNING, no entry stored in dbm for [ENSG00000231563.2] WARNING, no entry stored in dbm for [ENSG00000228436.3] WARNING, no entry stored in dbm for [ENSG00000234426.3] WARNING, no entry stored in dbm for [ENSG00000283384.1] WARNING, no entry stored in dbm for [ENSG00000244471.6] WARNING, no entry stored in dbm for [ENSG00000286071.1] WARNING, no entry stored in dbm for [ENSG00000278416.1] WARNING, no entry stored in dbm for [ENSG00000258342.2] WARNING, no entry stored in dbm for [ENSG00000271335.6] WARNING, no entry stored in dbm for [ENSG00000178723.7] WARNING, no entry stored in dbm for [ENSG00000270792.6] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000258526.7] WARNING, no entry stored in dbm for [ENSG00000274760.1] WARNING, no entry stored in dbm for [ENSG00000286898.1] WARNING, no entry stored in dbm for [ENSG00000231769.3] WARNING, no entry stored in dbm for [ENSG00000225311.1] WARNING, no entry stored in dbm for [ENSG00000230637.2] WARNING, no entry stored in dbm for [ENSG00000226310.1] WARNING, no entry stored in dbm for [ENSG00000215022.7] WARNING, no entry stored in dbm for [ENSG00000225689.2] WARNING, no entry stored in dbm for [ENSG00000259836.1] WARNING, no entry stored in dbm for [ENSG00000250900.6] WARNING, no entry stored in dbm for [ENSG00000265018.6] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000255085.8] WARNING, no entry stored in dbm for [ENSG00000251136.9] WARNING, no entry stored in dbm for [ENSG00000231507.2] WARNING, no entry stored in dbm for [ENSG00000285523.1] WARNING, no entry stored in dbm for [ENSG00000203804.5] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000259315.1] WARNING, no entry stored in dbm for [ENSG00000220267.1] WARNING, no entry stored in dbm for [ENSG00000276216.1] WARNING, no entry stored in dbm for [ENSG00000276216.1] WARNING, no entry stored in dbm for [ENSG00000226780.1] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000237188.5] WARNING, no entry stored in dbm for [ENSG00000277702.1] WARNING, no entry stored in dbm for [ENSG00000282572.2] WARNING, no entry stored in dbm for [ENSG00000241860.7] WARNING, no entry stored in dbm for [ENSG00000275121.1] WARNING, no entry stored in dbm for [ENSG00000275121.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000186704.9] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000254609.1] WARNING, no entry stored in dbm for [ENSG00000254609.1] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000261327.5] WARNING, no entry stored in dbm for [ENSG00000214135.8] WARNING, no entry stored in dbm for [ENSG00000214135.8] WARNING, no entry stored in dbm for [ENSG00000228205.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000286619.1] WARNING, no entry stored in dbm for [ENSG00000277511.1] WARNING, no entry stored in dbm for [ENSG00000248376.2] WARNING, no entry stored in dbm for [ENSG00000287463.1] WARNING, no entry stored in dbm for [ENSG00000259607.1] WARNING, no entry stored in dbm for [ENSG00000250159.7] WARNING, no entry stored in dbm for [ENSG00000286830.1] WARNING, no entry stored in dbm for [ENSG00000225855.7] WARNING, no entry stored in dbm for [ENSG00000224479.6] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000270177.1] WARNING, no entry stored in dbm for [ENSG00000287176.1] WARNING, no entry stored in dbm for [ENSG00000224818.1] WARNING, no entry stored in dbm for [ENSG00000287676.1] WARNING, no entry stored in dbm for [ENSG00000251378.1] WARNING, no entry stored in dbm for [ENSG00000249001.5] WARNING, no entry stored in dbm for [ENSG00000243620.2] WARNING, no entry stored in dbm for [ENSG00000276538.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000251391.5] WARNING, no entry stored in dbm for [ENSG00000268362.6] WARNING, no entry stored in dbm for [ENSG00000288633.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000248126.1] WARNING, no entry stored in dbm for [ENSG00000239969.5] WARNING, no entry stored in dbm for [ENSG00000267198.1] WARNING, no entry stored in dbm for [ENSG00000264164.1] WARNING, no entry stored in dbm for [ENSG00000265936.1] WARNING, no entry stored in dbm for [ENSG00000214259.3] WARNING, no entry stored in dbm for [ENSG00000266379.6] WARNING, no entry stored in dbm for [ENSG00000285744.1] WARNING, no entry stored in dbm for [ENSG00000286035.1] WARNING, no entry stored in dbm for [ENSG00000237161.4] WARNING, no entry stored in dbm for [ENSG00000269072.1] WARNING, no entry stored in dbm for [ENSG00000269072.1] WARNING, no entry stored in dbm for [ENSG00000267002.4] WARNING, no entry stored in dbm for [ENSG00000286090.1] WARNING, no entry stored in dbm for [ENSG00000258317.1] WARNING, no entry stored in dbm for [ENSG00000223899.1] WARNING, no entry stored in dbm for [ENSG00000267040.6] WARNING, no entry stored in dbm for [ENSG00000248223.1] WARNING, no entry stored in dbm for [ENSG00000257817.2] WARNING, no entry stored in dbm for [ENSG00000257817.2] WARNING, no entry stored in dbm for [ENSG00000250764.1] WARNING, no entry stored in dbm for [ENSG00000272382.1] WARNING, no entry stored in dbm for [ENSG00000274021.1] WARNING, no entry stored in dbm for [ENSG00000248515.2] WARNING, no entry stored in dbm for [ENSG00000272800.3] WARNING, no entry stored in dbm for [ENSG00000272800.3] WARNING, no entry stored in dbm for [ENSG00000259407.1] WARNING, no entry stored in dbm for [ENSG00000286282.1] WARNING, no entry stored in dbm for [ENSG00000260735.2] WARNING, no entry stored in dbm for [ENSG00000286534.1] WARNING, no entry stored in dbm for [ENSG00000271966.1] WARNING, no entry stored in dbm for [ENSG00000230551.4] WARNING, no entry stored in dbm for [ENSG00000234537.1] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000212978.6] WARNING, no entry stored in dbm for [ENSG00000270964.1] WARNING, no entry stored in dbm for [ENSG00000286030.2] WARNING, no entry stored in dbm for [ENSG00000270240.2] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000271018.1] WARNING, no entry stored in dbm for [ENSG00000224237.1] WARNING, no entry stored in dbm for [ENSG00000267244.5] WARNING, no entry stored in dbm for [ENSG00000269054.2] WARNING, no entry stored in dbm for [ENSG00000280061.1] WARNING, no entry stored in dbm for [ENSG00000267383.7] WARNING, no entry stored in dbm for [ENSG00000225840.2] WARNING, no entry stored in dbm for [ENSG00000235027.1] WARNING, no entry stored in dbm for [ENSG00000241281.1] WARNING, no entry stored in dbm for [ENSG00000286721.1] WARNING, no entry stored in dbm for [ENSG00000269439.6] WARNING, no entry stored in dbm for [ENSG00000269439.6] WARNING, no entry stored in dbm for [ENSG00000257966.1] WARNING, no entry stored in dbm for [ENSG00000226266.6] WARNING, no entry stored in dbm for [ENSG00000216895.9] WARNING, no entry stored in dbm for [ENSG00000234352.9] WARNING, no entry stored in dbm for [ENSG00000284649.1] WARNING, no entry stored in dbm for [ENSG00000284671.1] WARNING, no entry stored in dbm for [ENSG00000214331.8] WARNING, no entry stored in dbm for [ENSG00000286271.2] WARNING, no entry stored in dbm for [ENSG00000279529.1] WARNING, no entry stored in dbm for [ENSG00000248103.1] WARNING, no entry stored in dbm for [ENSG00000187172.15] WARNING, no entry stored in dbm for [ENSG00000257261.6] WARNING, no entry stored in dbm for [ENSG00000226472.8] WARNING, no entry stored in dbm for [ENSG00000285966.1] WARNING, no entry stored in dbm for [ENSG00000286107.1] WARNING, no entry stored in dbm for [ENSG00000277458.1] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000267324.1] WARNING, no entry stored in dbm for [ENSG00000268650.3] WARNING, no entry stored in dbm for [ENSG00000262879.6] WARNING, no entry stored in dbm for [ENSG00000266918.1] WARNING, no entry stored in dbm for [ENSG00000267056.2] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000254180.2] WARNING, no entry stored in dbm for [ENSG00000212663.2] WARNING, no entry stored in dbm for [ENSG00000235945.1] WARNING, no entry stored in dbm for [ENSG00000232680.2] WARNING, no entry stored in dbm for [ENSG00000251595.7] WARNING, no entry stored in dbm for [ENSG00000251595.7] WARNING, no entry stored in dbm for [ENSG00000254497.1] WARNING, no entry stored in dbm for [ENSG00000224486.1] * STAR-Fusion complete. See output: /tmp/nxf.IOd3u6VPJq/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)