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Filename
aih-tih-sc-331e97-R1_A23WJ53LT4_1.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/bc64e996e7b1197681a54270a2e98a/aih-tih-sc-331e97-R1_A23WJ53LT4_1.log
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641 bytes
Attempt
[quant] fragment length distribution will be estimated from the data
[index] k-mer length: 31
[index] number of targets: 194,360
[index] number of k-mers: 112,035,259
[quant] running in paired-end mode
[quant] will process pair 1: aih-tih-sc-331e97-R1_A23WJ53LT4_1_1.fastp.fastq.gz
                             aih-tih-sc-331e97-R1_A23WJ53LT4_1_2.fastp.fastq.gz
[quant] finding pseudoalignments for the reads ... done
[quant] processed 698,690 reads, 659,059 reads pseudoaligned
[quant] estimated average fragment length: 91.633
[   em] quantifying the abundances ... done
[   em] the Expectation-Maximization algorithm ran for 945 rounds