Started job on | Jun 08 07:48:23
Started mapping on | Jun 08 07:50:50
Finished on | Jun 08 08:18:51
Mapping speed, Million of reads per hour | 365.05
Number of input reads | 170457736
Average input read length | 231
UNIQUE READS:
Uniquely mapped reads number | 161046712
Uniquely mapped reads % | 94.48%
Average mapped length | 231.06
Number of splices: Total | 146612910
Number of splices: Annotated (sjdb) | 144397286
Number of splices: GT/AG | 145205467
Number of splices: GC/AG | 1002319
Number of splices: AT/AC | 107284
Number of splices: Non-canonical | 297840
Mismatch rate per base, % | 0.41%
Deletion rate per base | 0.01%
Deletion average length | 1.02
Insertion rate per base | 0.00%
Insertion average length | 1.49
MULTI-MAPPING READS:
Number of reads mapped to multiple loci | 6354824
% of reads mapped to multiple loci | 3.73%
Number of reads mapped to too many loci | 234355
% of reads mapped to too many loci | 0.14%
UNMAPPED READS:
Number of reads unmapped: too many mismatches | 346175
% of reads unmapped: too many mismatches | 0.20%
Number of reads unmapped: too short | 1223306
% of reads unmapped: too short | 0.72%
Number of reads unmapped: other | 138559
% of reads unmapped: other | 0.08%
CHIMERIC READS:
Number of chimeric reads | 1971403
% of chimeric reads | 1.16%