AIH curated blacklist: matched 12 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 176
Pass (FILTER=PASS): 6 (3.4%)
Fail (FILTER=FAIL): 170 (96.6%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 12
All 12 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 76
confidence_below_min(low<high): 11
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 3
total_reads_below_min(4.0<8.0): 2
Breakdown by confidence:
high: 6 pass, 7 fail (total: 13)
low: 0 pass, 67 fail (total: 67)
medium: 0 pass, 96 fail (total: 96)
Arriba filter: 176 rows -> 6 PASS; wrote aih-tih-sc-38a0a3-R1_A23WJ53LT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-38a0a3-R1_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-38a0a3-R1_A23WJ53LT4_1.arriba.fusions.filter_summary.txt