AIH curated blacklist: matched 4 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 162
Pass (FILTER=PASS): 25 (15.4%)
Fail (FILTER=FAIL): 137 (84.6%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 4
All 4 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 28
confidence_below_min(medium<high): 20
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 17
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 15
confidence_below_min(low<high): 10
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
total_reads_below_min(6.0<8.0): 2
confidence_below_min(medium<high);aih_curated_blacklist: 2
Breakdown by confidence:
high: 25 pass, 4 fail (total: 29)
low: 0 pass, 53 fail (total: 53)
medium: 0 pass, 80 fail (total: 80)
Arriba filter: 162 rows -> 25 PASS; wrote aih-tih-sc-1351d2-R1_A23WJ53LT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-1351d2-R1_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-1351d2-R1_A23WJ53LT4_1.arriba.fusions.filter_summary.txt