Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ce/dcd802fd407b93f657d3f0a5737708/aih-tih-sc-3a9c1f-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/615232260cc1696c53fa3e67341fa5/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/615232260cc1696c53fa3e67341fa5/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory