File Info
- Filename
- Demultiplex_Stats.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0020/B23WHTKLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L007/Reports/Demultiplex_Stats.csv
- Size
- 10.7 KB
- Workflow Run
- dev_rna_exp0020-73d51683
- Published
- Jun 07, 2026 11:51 PM
Content
View in new tab| Lane | SampleID | Index | # Reads | # Perfect Index Reads | # One Mismatch Index Reads | # Two Mismatch Index Reads | % Reads | % Perfect Index Reads | % One Mismatch Index Reads | % Two Mismatch Index Reads |
| 7 | 659_c95-T1-TRNA-1_B23WHTKLT4_1 | TAACTTGGTC-GTCGTGAATC | 43609455 | 42953997 | 655458 | 0 | 0.0111 | 0.9850 | 0.0150 | 0.0000 |
| 7 | 659_ciJ-T1-TRNA-1_B23WHTKLT4_1 | ATAAGCGGAG-CTGTTCTACG | 36834330 | 35844637 | 989693 | 0 | 0.0094 | 0.9731 | 0.0269 | 0.0000 |
| 7 | 659_bhK-T1-TRNA-1_B23WHTKLT4_1 | AGTAGTGTTG-AACACCTCTT | 60850026 | 59806243 | 1043783 | 0 | 0.0155 | 0.9828 | 0.0172 | 0.0000 |
| 7 | 659_Lx-T1-TRNA-1_B23WHTKLT4_1 | ATGTTGCCAC-TAGAAGCCAT | 31899958 | 31416708 | 483250 | 0 | 0.0081 | 0.9849 | 0.0151 | 0.0000 |
| 7 | 659_bUW-T1-TRNA-1_B23WHTKLT4_1 | CAGCAGGTCA-CACTTAGGTA | 78452167 | 77530151 | 922016 | 0 | 0.0200 | 0.9882 | 0.0118 | 0.0000 |
| 7 | 659_d01-T1-TRNA-1_B23WHTKLT4_1 | TCTAGCTGCG-ATAGGTAAGG | 31524233 | 31021131 | 503102 | 0 | 0.0080 | 0.9840 | 0.0160 | 0.0000 |
| 7 | 659_bNS-T1-TRNA-1_B23WHTKLT4_1 | AGATTAGCGT-CGCCTTATAT | 42905823 | 41837469 | 1068354 | 0 | 0.0109 | 0.9751 | 0.0249 | 0.0000 |
| 7 | 659_buD-T1-TRNA-1_B23WHTKLT4_1 | AGGTAACAAC-GCACGATGCT | 28410809 | 27999871 | 410938 | 0 | 0.0072 | 0.9855 | 0.0145 | 0.0000 |
| 7 | 659_Dl-T1-TRNA-1_B23WHTKLT4_1 | CGCACTTCGT-AATATGCCAG | 19476741 | 19196031 | 280710 | 0 | 0.0050 | 0.9856 | 0.0144 | 0.0000 |
| 7 | 659_dES-T1-TRNA-1_B23WHTKLT4_1 | CTTGCTATTC-TAGAGTCACG | 42022012 | 41379778 | 642234 | 0 | 0.0107 | 0.9847 | 0.0153 | 0.0000 |
| 7 | 659_ecd-T1-TRNA-1_B23WHTKLT4_1 | TCTCACCAGG-TTAACAGGTC | 42909970 | 42164264 | 745706 | 0 | 0.0109 | 0.9826 | 0.0174 | 0.0000 |
| 7 | 659_cfy-T1-TRNA-1_B23WHTKLT4_1 | TTCCTCACGT-ACATGAGCCA | 52644679 | 51878964 | 765715 | 0 | 0.0134 | 0.9855 | 0.0145 | 0.0000 |
| 7 | 659_bGc-T1-TRNA-1_B23WHTKLT4_1 | TCGAACACGA-GCGAGGTTCT | 25031362 | 24667532 | 363830 | 0 | 0.0064 | 0.9855 | 0.0145 | 0.0000 |
| 7 | 659_dts-T1-TRNA-1_B23WHTKLT4_1 | TCCAACTGAA-TGTCCGTAGG | 26401277 | 25939424 | 461853 | 0 | 0.0067 | 0.9825 | 0.0175 | 0.0000 |
| 7 | 659_cRa-T1-TRNA-1_B23WHTKLT4_1 | GAACCGCATT-CATTATGCCT | 56669651 | 55889511 | 780140 | 0 | 0.0144 | 0.9862 | 0.0138 | 0.0000 |
| 7 | 659_cTi-T1-TRNA-1_B23WHTKLT4_1 | ACAACAGGCT-TCCACTGTTG | 48805005 | 48149592 | 655413 | 0 | 0.0124 | 0.9866 | 0.0134 | 0.0000 |
| 7 | 659_bGW-T1-TRNA-1_B23WHTKLT4_1 | TTACGCGCAT-CTTAACGACA | 60694253 | 59872275 | 821978 | 0 | 0.0154 | 0.9865 | 0.0135 | 0.0000 |
| 7 | 659_bQZ-T1-TRNA-1_B23WHTKLT4_1 | TTCTCTTAGC-TCCTCGAGCT | 35541992 | 35061595 | 480397 | 0 | 0.0090 | 0.9865 | 0.0135 | 0.0000 |
| 7 | 659_ezg-T1-TRNA-1_B23WHTKLT4_1 | TCGCGACACT-CGAGTAATGT | 51244596 | 50539555 | 705041 | 0 | 0.0130 | 0.9862 | 0.0138 | 0.0000 |
| 7 | 659_bTo-T1-TRNA-1_B23WHTKLT4_1 | TGGAGATCGA-CAGCGGTATG | 55311866 | 54134273 | 1177593 | 0 | 0.0141 | 0.9787 | 0.0213 | 0.0000 |
| 7 | 659_Mt-T1-TRNA-1_B23WHTKLT4_1 | CCAGACCGAT-GCTACTTGCA | 21350199 | 20974769 | 375430 | 0 | 0.0054 | 0.9824 | 0.0176 | 0.0000 |
| 7 | 659_djb-T1-TRNA-1_B23WHTKLT4_1 | CCACAGCCTT-GCTATTGAAG | 38404651 | 37786063 | 618588 | 0 | 0.0098 | 0.9839 | 0.0161 | 0.0000 |
| 7 | 659_gK-T1-TRNA-1_B23WHTKLT4_1 | ACCGAATAGA-TCAGCATCCG | 23929945 | 23566578 | 363367 | 0 | 0.0061 | 0.9848 | 0.0152 | 0.0000 |
| 7 | 659_rd-T1-TRNA-1_B23WHTKLT4_1 | CGGACGATTC-TAGGTGGTGG | 43392927 | 42837820 | 555107 | 0 | 0.0110 | 0.9872 | 0.0128 | 0.0000 |
| 7 | 659_epP-T1-TRNA-1_B23WHTKLT4_1 | TTACTTCGTG-AAGATCGGAT | 41896986 | 41298264 | 598722 | 0 | 0.0107 | 0.9857 | 0.0143 | 0.0000 |
| 7 | 659_ciZ-T1-TRNA-1_B23WHTKLT4_1 | ATTCGGCTTA-TTAACGTCCG | 40204842 | 39676967 | 527875 | 0 | 0.0102 | 0.9869 | 0.0131 | 0.0000 |
| 7 | 659_cAd-T1-TRNA-1_B23WHTKLT4_1 | CGCGGTATCT-ATTACCGATC | 40588510 | 40058967 | 529543 | 0 | 0.0103 | 0.9870 | 0.0130 | 0.0000 |
| 7 | 659_cRB-T1-TRNA-1_B23WHTKLT4_1 | TATCCGCGTC-GTTGCATCGT | 30836130 | 30335664 | 500466 | 0 | 0.0078 | 0.9838 | 0.0162 | 0.0000 |
| 7 | 659_dcz-T1-TRNA-1_B23WHTKLT4_1 | AGGATGTCCA-ACTGGACGTT | 6231874 | 6129258 | 102616 | 0 | 0.0016 | 0.9835 | 0.0165 | 0.0000 |
| 7 | 659_dc8-T1-TRNA-1_B23WHTKLT4_1 | GCCAGCTATC-TTGTTCGTGT | 40048404 | 39479434 | 568970 | 0 | 0.0102 | 0.9858 | 0.0142 | 0.0000 |
| 7 | 659_cWx-T1-TRNA-1_B23WHTKLT4_1 | CTTACGAACT-ACGGACTGAG | 38369087 | 37738790 | 630297 | 0 | 0.0098 | 0.9836 | 0.0164 | 0.0000 |
| 7 | 659_cVw-T1-TRNA-1_B23WHTKLT4_1 | CAAGACTCAA-CACCGTCATA | 48586483 | 47829814 | 756669 | 0 | 0.0124 | 0.9844 | 0.0156 | 0.0000 |
| 7 | 659_dm4-T1-TRNA-1_B23WHTKLT4_1 | TCGACGGCAA-GTAGTTGTGT | 13259989 | 13071694 | 188295 | 0 | 0.0034 | 0.9858 | 0.0142 | 0.0000 |
| 7 | 659_6i-T1-TRNA-1_B23WHTKLT4_1 | TCAGTTCGAT-CTGAGTCCTT | 24735206 | 24367074 | 368132 | 0 | 0.0063 | 0.9851 | 0.0149 | 0.0000 |
| 7 | 659_bCu-T1-TRNA-1_B23WHTKLT4_1 | CTAACCTCAA-TCACAGTTGC | 8872993 | 8713435 | 159558 | 0 | 0.0023 | 0.9820 | 0.0180 | 0.0000 |
| 7 | 659_cIX-T1-TRNA-1_B23WHTKLT4_1 | GACCTACTAT-ATTGTAAGCG | 39350735 | 38738752 | 611983 | 0 | 0.0100 | 0.9844 | 0.0156 | 0.0000 |
| 7 | 659_bua-T1-TRNA-1_B23WHTKLT4_1 | ACGAGACGTC-CGGTCTCTCT | 34360354 | 33824644 | 535710 | 0 | 0.0087 | 0.9844 | 0.0156 | 0.0000 |
| 7 | FFPE_HD789_01_RNA_13_B23WHTKLT4_1 | TATGGCAAGC-AACAGCAATG | 67197143 | 66193937 | 1003206 | 0 | 0.0171 | 0.9851 | 0.0149 | 0.0000 |
| 7 | FFPE_V4_0002_RNA_0001_B23WHTKLT4_1 | ACTCCGAAGC-TCCGTGTTGC | 41039787 | 40528264 | 511523 | 0 | 0.0104 | 0.9875 | 0.0125 | 0.0000 |
| 7 | NTC_0001_0001_B23WHTKLT4_1 | AATCTGCAGT-TGCGAAGTGA | 103822 | 102423 | 1399 | 0 | 0.0000 | 0.9865 | 0.0135 | 0.0000 |
| 7 | tih_rna_sample_00434_B23WHTKLT4_1 | AGTTCAGGCG-CACAGCTATT | 53184614 | 52447177 | 737437 | 0 | 0.0135 | 0.9861 | 0.0139 | 0.0000 |
| 7 | tih_rna_sample_00096_B23WHTKLT4_1 | CGCCAAGGTA-GATAGTGTTC | 42907711 | 42273076 | 634635 | 0 | 0.0109 | 0.9852 | 0.0148 | 0.0000 |
| 7 | tih_rna_sample_00097_B23WHTKLT4_1 | CCTGACATCT-TAGCTACCAG | 52023324 | 50871263 | 1152061 | 0 | 0.0132 | 0.9779 | 0.0221 | 0.0000 |
| 7 | tih_rna_sample_00087_B23WHTKLT4_1 | CGAGCGTAGT-TGCTCACGCA | 63271524 | 62460423 | 811101 | 0 | 0.0161 | 0.9872 | 0.0128 | 0.0000 |
| 7 | tih_rna_sample_00434_B23WHTKLT4_2 | CTGGATTACT-AAGTGTGCTA | 52617038 | 51992000 | 625038 | 0 | 0.0134 | 0.9881 | 0.0119 | 0.0000 |
| 7 | tih_rna_sample_00096_B23WHTKLT4_2 | AGCAATTCAC-TCATCGTCTG | 51345823 | 50660329 | 685494 | 0 | 0.0131 | 0.9866 | 0.0134 | 0.0000 |
| 7 | tih_rna_sample_00097_B23WHTKLT4_2 | ATATTCTCGG-AGATGCTCCG | 42703026 | 41965933 | 737093 | 0 | 0.0109 | 0.9827 | 0.0173 | 0.0000 |
| 7 | tih_rna_sample_00087_B23WHTKLT4_2 | GACTCATCCA-GAACCAAGCG | 56755894 | 55880521 | 875373 | 0 | 0.0144 | 0.9846 | 0.0154 | 0.0000 |
| 7 | tih_rna_sample_00124_B23WHTKLT4_1 | CATAAGCGAC-CCTCTTCAAG | 29793585 | 29318955 | 474630 | 0 | 0.0076 | 0.9841 | 0.0159 | 0.0000 |
| 7 | tih_rna_sample_00090_B23WHTKLT4_1 | CCTAAGCTGA-CGTCGCATCT | 26778929 | 26345544 | 433385 | 0 | 0.0068 | 0.9838 | 0.0162 | 0.0000 |
| 7 | tih_rna_sample_00116_B23WHTKLT4_1 | CGATGTCTTG-CCGAACGTTC | 40144083 | 39573010 | 571073 | 0 | 0.0102 | 0.9858 | 0.0142 | 0.0000 |
| 7 | tih_rna_sample_00089_B23WHTKLT4_1 | GAGATGAGAG-GAATGGCGTT | 24201784 | 23624435 | 577349 | 0 | 0.0062 | 0.9761 | 0.0239 | 0.0000 |
| 7 | tih_rna_sample_00124_B23WHTKLT4_2 | TCACCATAAG-AAGTTCAGGA | 28842033 | 28411796 | 430237 | 0 | 0.0073 | 0.9851 | 0.0149 | 0.0000 |
| 7 | tih_rna_sample_00090_B23WHTKLT4_2 | ACTTCCGGCA-GACCAATTGT | 42732551 | 42177819 | 554732 | 0 | 0.0109 | 0.9870 | 0.0130 | 0.0000 |
| 7 | tih_rna_sample_00116_B23WHTKLT4_2 | AAGCGCTTAG-TGTCTGTGAC | 35754508 | 35088848 | 665660 | 0 | 0.0091 | 0.9814 | 0.0186 | 0.0000 |
| 7 | tih_rna_sample_00089_B23WHTKLT4_2 | AACAACACAG-GAACATTGGC | 46185082 | 45506235 | 678847 | 0 | 0.0118 | 0.9853 | 0.0147 | 0.0000 |
| 7 | tih_rna_sample_00121_B23WHTKLT4_1 | AGACTAGATG-CGTAACACTA | 37963455 | 37351831 | 611624 | 0 | 0.0097 | 0.9839 | 0.0161 | 0.0000 |
| 7 | tih_rna_sample_00163_B23WHTKLT4_1 | CCTCTATAGA-GTACTTCCAA | 24078756 | 23668127 | 410629 | 0 | 0.0061 | 0.9829 | 0.0171 | 0.0000 |
| 7 | tih_rna_sample_00136_B23WHTKLT4_1 | TACGCTACTT-TTAGCGTCTT | 34238660 | 33736140 | 502520 | 0 | 0.0087 | 0.9853 | 0.0147 | 0.0000 |
| 7 | tih_rna_sample_00145_B23WHTKLT4_1 | CGCACTGGTA-TTGACCGTCT | 43191056 | 42620681 | 570375 | 0 | 0.0110 | 0.9868 | 0.0132 | 0.0000 |
| 7 | tih_rna_sample_00121_B23WHTKLT4_2 | AACTCTCTAC-ACGGCTTCTC | 39330655 | 38590240 | 740415 | 0 | 0.0100 | 0.9812 | 0.0188 | 0.0000 |
| 7 | tih_rna_sample_00163_B23WHTKLT4_2 | GCCACCTAGT-TGCGATGTAT | 40964702 | 40175746 | 788956 | 0 | 0.0104 | 0.9807 | 0.0193 | 0.0000 |
| 7 | tih_rna_sample_00136_B23WHTKLT4_2 | CTCCGCCATA-GCGTTCAGCA | 34430846 | 33913967 | 516879 | 0 | 0.0088 | 0.9850 | 0.0150 | 0.0000 |
| 7 | tih_rna_sample_00145_B23WHTKLT4_2 | TGACACGATT-GCCTAGGAAG | 37596736 | 36991419 | 605317 | 0 | 0.0096 | 0.9839 | 0.0161 | 0.0000 |
| 7 | tih_rna_sample_00146_B23WHTKLT4_1 | CAACTGCGCA-AGTGTATCCG | 41536912 | 40792802 | 744110 | 0 | 0.0106 | 0.9821 | 0.0179 | 0.0000 |
| 7 | tih_rna_sample_00149_B23WHTKLT4_1 | GCAATCTGCT-ACGAACCAAG | 29998108 | 29537817 | 460291 | 0 | 0.0076 | 0.9847 | 0.0153 | 0.0000 |
| 7 | tih_rna_sample_00150_B23WHTKLT4_1 | CTCTATTGAG-CACGCAAGTC | 31798853 | 31028592 | 770261 | 0 | 0.0081 | 0.9758 | 0.0242 | 0.0000 |
| 7 | tih_rna_sample_00158_B23WHTKLT4_1 | CACTTACGGC-GCTGGAGAAG | 28653944 | 28223885 | 430059 | 0 | 0.0073 | 0.9850 | 0.0150 | 0.0000 |
| 7 | tih_rna_sample_00146_B23WHTKLT4_2 | TCAGCATCTA-CCAGTGTACG | 51120347 | 50376666 | 743681 | 0 | 0.0130 | 0.9855 | 0.0145 | 0.0000 |
| 7 | tih_rna_sample_00149_B23WHTKLT4_2 | GTTGCATCAA-GTTGATGCGA | 32537522 | 32117456 | 420066 | 0 | 0.0083 | 0.9871 | 0.0129 | 0.0000 |
| 7 | tih_rna_sample_00150_B23WHTKLT4_2 | ATGACAGCAC-CGCTTGTTAT | 48984513 | 48115331 | 869182 | 0 | 0.0125 | 0.9823 | 0.0177 | 0.0000 |
| 7 | tih_rna_sample_00158_B23WHTKLT4_2 | TAGCGACGGA-GTAACGTTCA | 20816444 | 20436072 | 380372 | 0 | 0.0053 | 0.9817 | 0.0183 | 0.0000 |
| 7 | tih_rna_sample_00161_B23WHTKLT4_1 | GTATGCCACA-CCGAGTCTTC | 37919939 | 37398278 | 521661 | 0 | 0.0096 | 0.9862 | 0.0138 | 0.0000 |
| 7 | tih_rna_sample_00164_B23WHTKLT4_1 | AGTATCCGAT-TATTGCGCTA | 31947816 | 31210898 | 736918 | 0 | 0.0081 | 0.9769 | 0.0231 | 0.0000 |
| 7 | tih_rna_sample_00166_B23WHTKLT4_1 | AACGAAGATC-TGTGGTCTAA | 39697256 | 39085773 | 611483 | 0 | 0.0101 | 0.9846 | 0.0154 | 0.0000 |
| 7 | tih_rna_sample_00451_B23WHTKLT4_1 | CCTCCTGTGA-CACGTCTACG | 36652760 | 35884517 | 768243 | 0 | 0.0093 | 0.9790 | 0.0210 | 0.0000 |
| 7 | tih_rna_sample_00161_B23WHTKLT4_2 | TAGGCGAATG-AGTCCAGTGA | 47686196 | 47037347 | 648849 | 0 | 0.0121 | 0.9864 | 0.0136 | 0.0000 |
| 7 | tih_rna_sample_00164_B23WHTKLT4_2 | AGTAAGGAGA-ATGCTTGGTC | 17472885 | 17211379 | 261506 | 0 | 0.0044 | 0.9850 | 0.0150 | 0.0000 |
| 7 | tih_rna_sample_00166_B23WHTKLT4_2 | CCGAACAGAG-TGATACTCGC | 29575398 | 29010329 | 565069 | 0 | 0.0075 | 0.9809 | 0.0191 | 0.0000 |
| 7 | tih_rna_sample_00451_B23WHTKLT4_2 | AGAACTAACG-TTATCGAGAG | 22175901 | 21857144 | 318757 | 0 | 0.0056 | 0.9856 | 0.0144 | 0.0000 |
| 7 | tih_rna_sample_00457_B23WHTKLT4_1 | GAGCAGCTTG-TGCCAGTATT | 51254528 | 50303048 | 951480 | 0 | 0.0130 | 0.9814 | 0.0186 | 0.0000 |
| 7 | tih_rna_sample_00462_B23WHTKLT4_1 | CCGATAGTAG-GAGTTGCATA | 54410494 | 53128429 | 1282065 | 0 | 0.0138 | 0.9764 | 0.0236 | 0.0000 |
| 7 | tih_rna_sample_00464_B23WHTKLT4_1 | GTGTCTACAG-ACACTAGCAT | 35080684 | 34577864 | 502820 | 0 | 0.0089 | 0.9857 | 0.0143 | 0.0000 |
| 7 | tih_rna_sample_00467_B23WHTKLT4_1 | GTACAGACCG-GTTCTAATGG | 37316381 | 36718388 | 597993 | 0 | 0.0095 | 0.9840 | 0.0160 | 0.0000 |
| 7 | tih_rna_sample_00457_B23WHTKLT4_2 | GCCAACAGAC-CGTTCACGTT | 38993177 | 38428889 | 564288 | 0 | 0.0099 | 0.9855 | 0.0145 | 0.0000 |
| 7 | tih_rna_sample_00462_B23WHTKLT4_2 | CCTCGTTGGA-GACTGCGTTA | 41119277 | 40483324 | 635953 | 0 | 0.0105 | 0.9845 | 0.0155 | 0.0000 |
| 7 | tih_rna_sample_00464_B23WHTKLT4_2 | AATAGGTAGG-TGGCTTATGG | 26143130 | 25812062 | 331068 | 0 | 0.0067 | 0.9873 | 0.0127 | 0.0000 |
| 7 | tih_rna_sample_00467_B23WHTKLT4_2 | TATGCGTAGC-TCAGAGGCAC | 39200336 | 38632195 | 568141 | 0 | 0.0100 | 0.9855 | 0.0145 | 0.0000 |
| 7 | tih_rna_sample_00473_B23WHTKLT4_1 | CCAGTCGTCA-CGCTAGGCTA | 60708247 | 59766197 | 942050 | 0 | 0.0154 | 0.9845 | 0.0155 | 0.0000 |
| 7 | tih_rna_sample_00461_B23WHTKLT4_1 | AGAAGACCTA-AACCGTAACA | 6594690 | 6462416 | 132274 | 0 | 0.0017 | 0.9799 | 0.0201 | 0.0000 |
| 7 | tih_rna_sample_00479_B23WHTKLT4_1 | CCGTGAGTTC-CTTGGTATGA | 47892587 | 47252395 | 640192 | 0 | 0.0122 | 0.9866 | 0.0134 | 0.0000 |
| 7 | tih_rna_sample_00480_B23WHTKLT4_1 | TCAATTCCGA-TGTAGATCCG | 36226455 | 35793265 | 433190 | 0 | 0.0092 | 0.9880 | 0.0120 | 0.0000 |
| 7 | tih_rna_sample_00473_B23WHTKLT4_2 | CGGAACACAA-AACTCTACCG | 67608286 | 66501145 | 1107141 | 0 | 0.0172 | 0.9836 | 0.0164 | 0.0000 |
| 7 | tih_rna_sample_00461_B23WHTKLT4_2 | CTATAACGGA-CGTGACATTC | 25008433 | 24632714 | 375719 | 0 | 0.0064 | 0.9850 | 0.0150 | 0.0000 |
| 7 | tih_rna_sample_00479_B23WHTKLT4_2 | AGATGTAAGG-CTGTACCAGG | 24090332 | 23763328 | 327004 | 0 | 0.0061 | 0.9864 | 0.0136 | 0.0000 |
| 7 | tih_rna_sample_00480_B23WHTKLT4_2 | ATGCTTACTG-ACTGGTTCCG | 46440835 | 45731870 | 708965 | 0 | 0.0118 | 0.9847 | 0.0153 | 0.0000 |
| 7 | Undetermined | 247868778 | 247868778 | 0 | 0 | 0.0631 | 1.0000 | 0.0000 | 0.0000 |
98 rows