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Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0020/B23WHTKLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L001/Reports/Demultiplex_Stats.csv
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10.7 KB
Workflow Run
dev_rna_exp0020-73d51683
Published
Jun 07, 2026 11:57 PM

Content

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Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
1 659_c95-T1-TRNA-1_B23WHTKLT4_1 TAACTTGGTC-GTCGTGAATC 42169465 41537883 631582 0 0.0110 0.9850 0.0150 0.0000
1 659_ciJ-T1-TRNA-1_B23WHTKLT4_1 ATAAGCGGAG-CTGTTCTACG 35802109 34788490 1013619 0 0.0094 0.9717 0.0283 0.0000
1 659_bhK-T1-TRNA-1_B23WHTKLT4_1 AGTAGTGTTG-AACACCTCTT 59438606 58572769 865837 0 0.0155 0.9854 0.0146 0.0000
1 659_Lx-T1-TRNA-1_B23WHTKLT4_1 ATGTTGCCAC-TAGAAGCCAT 31428114 30934865 493249 0 0.0082 0.9843 0.0157 0.0000
1 659_bUW-T1-TRNA-1_B23WHTKLT4_1 CAGCAGGTCA-CACTTAGGTA 76227333 75333862 893471 0 0.0199 0.9883 0.0117 0.0000
1 659_d01-T1-TRNA-1_B23WHTKLT4_1 TCTAGCTGCG-ATAGGTAAGG 30929605 30438365 491240 0 0.0081 0.9841 0.0159 0.0000
1 659_bNS-T1-TRNA-1_B23WHTKLT4_1 AGATTAGCGT-CGCCTTATAT 42185842 41080554 1105288 0 0.0110 0.9738 0.0262 0.0000
1 659_buD-T1-TRNA-1_B23WHTKLT4_1 AGGTAACAAC-GCACGATGCT 27421571 27017997 403574 0 0.0072 0.9853 0.0147 0.0000
1 659_Dl-T1-TRNA-1_B23WHTKLT4_1 CGCACTTCGT-AATATGCCAG 18966615 18692866 273749 0 0.0050 0.9856 0.0144 0.0000
1 659_dES-T1-TRNA-1_B23WHTKLT4_1 CTTGCTATTC-TAGAGTCACG 41122584 40478385 644199 0 0.0108 0.9843 0.0157 0.0000
1 659_ecd-T1-TRNA-1_B23WHTKLT4_1 TCTCACCAGG-TTAACAGGTC 41252764 40504114 748650 0 0.0108 0.9819 0.0181 0.0000
1 659_cfy-T1-TRNA-1_B23WHTKLT4_1 TTCCTCACGT-ACATGAGCCA 50965503 50220262 745241 0 0.0133 0.9854 0.0146 0.0000
1 659_bGc-T1-TRNA-1_B23WHTKLT4_1 TCGAACACGA-GCGAGGTTCT 24032035 23680515 351520 0 0.0063 0.9854 0.0146 0.0000
1 659_dts-T1-TRNA-1_B23WHTKLT4_1 TCCAACTGAA-TGTCCGTAGG 25985431 25513157 472274 0 0.0068 0.9818 0.0182 0.0000
1 659_cRa-T1-TRNA-1_B23WHTKLT4_1 GAACCGCATT-CATTATGCCT 54792453 54041743 750710 0 0.0143 0.9863 0.0137 0.0000
1 659_cTi-T1-TRNA-1_B23WHTKLT4_1 ACAACAGGCT-TCCACTGTTG 47208290 46566811 641479 0 0.0123 0.9864 0.0136 0.0000
1 659_bGW-T1-TRNA-1_B23WHTKLT4_1 TTACGCGCAT-CTTAACGACA 58103176 57311574 791602 0 0.0152 0.9864 0.0136 0.0000
1 659_bQZ-T1-TRNA-1_B23WHTKLT4_1 TTCTCTTAGC-TCCTCGAGCT 34475178 33994024 481154 0 0.0090 0.9860 0.0140 0.0000
1 659_ezg-T1-TRNA-1_B23WHTKLT4_1 TCGCGACACT-CGAGTAATGT 49947329 49244964 702365 0 0.0131 0.9859 0.0141 0.0000
1 659_bTo-T1-TRNA-1_B23WHTKLT4_1 TGGAGATCGA-CAGCGGTATG 53604792 52439532 1165260 0 0.0140 0.9783 0.0217 0.0000
1 659_Mt-T1-TRNA-1_B23WHTKLT4_1 CCAGACCGAT-GCTACTTGCA 20794476 20418705 375771 0 0.0054 0.9819 0.0181 0.0000
1 659_djb-T1-TRNA-1_B23WHTKLT4_1 CCACAGCCTT-GCTATTGAAG 37394659 36780869 613790 0 0.0098 0.9836 0.0164 0.0000
1 659_gK-T1-TRNA-1_B23WHTKLT4_1 ACCGAATAGA-TCAGCATCCG 23294607 22933718 360889 0 0.0061 0.9845 0.0155 0.0000
1 659_rd-T1-TRNA-1_B23WHTKLT4_1 CGGACGATTC-TAGGTGGTGG 42371692 41838422 533270 0 0.0111 0.9874 0.0126 0.0000
1 659_epP-T1-TRNA-1_B23WHTKLT4_1 TTACTTCGTG-AAGATCGGAT 40328107 39753847 574260 0 0.0105 0.9858 0.0142 0.0000
1 659_ciZ-T1-TRNA-1_B23WHTKLT4_1 ATTCGGCTTA-TTAACGTCCG 39641506 39123148 518358 0 0.0104 0.9869 0.0131 0.0000
1 659_cAd-T1-TRNA-1_B23WHTKLT4_1 CGCGGTATCT-ATTACCGATC 39979792 39464398 515394 0 0.0105 0.9871 0.0129 0.0000
1 659_cRB-T1-TRNA-1_B23WHTKLT4_1 TATCCGCGTC-GTTGCATCGT 30779770 30277251 502519 0 0.0081 0.9837 0.0163 0.0000
1 659_dcz-T1-TRNA-1_B23WHTKLT4_1 AGGATGTCCA-ACTGGACGTT 6131682 6031285 100397 0 0.0016 0.9836 0.0164 0.0000
1 659_dc8-T1-TRNA-1_B23WHTKLT4_1 GCCAGCTATC-TTGTTCGTGT 38535771 37988455 547316 0 0.0101 0.9858 0.0142 0.0000
1 659_cWx-T1-TRNA-1_B23WHTKLT4_1 CTTACGAACT-ACGGACTGAG 36935619 36319868 615751 0 0.0097 0.9833 0.0167 0.0000
1 659_cVw-T1-TRNA-1_B23WHTKLT4_1 CAAGACTCAA-CACCGTCATA 46736476 45989278 747198 0 0.0122 0.9840 0.0160 0.0000
1 659_dm4-T1-TRNA-1_B23WHTKLT4_1 TCGACGGCAA-GTAGTTGTGT 12932676 12747892 184784 0 0.0034 0.9857 0.0143 0.0000
1 659_6i-T1-TRNA-1_B23WHTKLT4_1 TCAGTTCGAT-CTGAGTCCTT 24276356 23909482 366874 0 0.0063 0.9849 0.0151 0.0000
1 659_bCu-T1-TRNA-1_B23WHTKLT4_1 CTAACCTCAA-TCACAGTTGC 8663013 8501656 161357 0 0.0023 0.9814 0.0186 0.0000
1 659_cIX-T1-TRNA-1_B23WHTKLT4_1 GACCTACTAT-ATTGTAAGCG 38073366 37478414 594952 0 0.0100 0.9844 0.0156 0.0000
1 659_bua-T1-TRNA-1_B23WHTKLT4_1 ACGAGACGTC-CGGTCTCTCT 33170557 32644997 525560 0 0.0087 0.9842 0.0158 0.0000
1 FFPE_HD789_01_RNA_13_B23WHTKLT4_1 TATGGCAAGC-AACAGCAATG 63635726 62687503 948223 0 0.0166 0.9851 0.0149 0.0000
1 FFPE_V4_0002_RNA_0001_B23WHTKLT4_1 ACTCCGAAGC-TCCGTGTTGC 39128750 38643676 485074 0 0.0102 0.9876 0.0124 0.0000
1 NTC_0001_0001_B23WHTKLT4_1 AATCTGCAGT-TGCGAAGTGA 105948 104444 1504 0 0.0000 0.9858 0.0142 0.0000
1 tih_rna_sample_00434_B23WHTKLT4_1 AGTTCAGGCG-CACAGCTATT 52131650 51403699 727951 0 0.0136 0.9860 0.0140 0.0000
1 tih_rna_sample_00096_B23WHTKLT4_1 CGCCAAGGTA-GATAGTGTTC 40904226 40288033 616193 0 0.0107 0.9849 0.0151 0.0000
1 tih_rna_sample_00097_B23WHTKLT4_1 CCTGACATCT-TAGCTACCAG 50960606 49770385 1190221 0 0.0133 0.9766 0.0234 0.0000
1 tih_rna_sample_00087_B23WHTKLT4_1 CGAGCGTAGT-TGCTCACGCA 61734731 60944669 790062 0 0.0161 0.9872 0.0128 0.0000
1 tih_rna_sample_00434_B23WHTKLT4_2 CTGGATTACT-AAGTGTGCTA 51041169 50447184 593985 0 0.0134 0.9884 0.0116 0.0000
1 tih_rna_sample_00096_B23WHTKLT4_2 AGCAATTCAC-TCATCGTCTG 49375097 48714174 660923 0 0.0129 0.9866 0.0134 0.0000
1 tih_rna_sample_00097_B23WHTKLT4_2 ATATTCTCGG-AGATGCTCCG 42334473 41602234 732239 0 0.0111 0.9827 0.0173 0.0000
1 tih_rna_sample_00087_B23WHTKLT4_2 GACTCATCCA-GAACCAAGCG 54543106 53692767 850339 0 0.0143 0.9844 0.0156 0.0000
1 tih_rna_sample_00124_B23WHTKLT4_1 CATAAGCGAC-CCTCTTCAAG 28740974 28266626 474348 0 0.0075 0.9835 0.0165 0.0000
1 tih_rna_sample_00090_B23WHTKLT4_1 CCTAAGCTGA-CGTCGCATCT 26414150 25980633 433517 0 0.0069 0.9836 0.0164 0.0000
1 tih_rna_sample_00116_B23WHTKLT4_1 CGATGTCTTG-CCGAACGTTC 39640388 39071177 569211 0 0.0104 0.9856 0.0144 0.0000
1 tih_rna_sample_00089_B23WHTKLT4_1 GAGATGAGAG-GAATGGCGTT 23155694 22587674 568020 0 0.0061 0.9755 0.0245 0.0000
1 tih_rna_sample_00124_B23WHTKLT4_2 TCACCATAAG-AAGTTCAGGA 28202737 27779429 423308 0 0.0074 0.9850 0.0150 0.0000
1 tih_rna_sample_00090_B23WHTKLT4_2 ACTTCCGGCA-GACCAATTGT 41432156 40897429 534727 0 0.0108 0.9871 0.0129 0.0000
1 tih_rna_sample_00116_B23WHTKLT4_2 AAGCGCTTAG-TGTCTGTGAC 35322778 34644243 678535 0 0.0092 0.9808 0.0192 0.0000
1 tih_rna_sample_00089_B23WHTKLT4_2 AACAACACAG-GAACATTGGC 45078835 44405090 673745 0 0.0118 0.9851 0.0149 0.0000
1 tih_rna_sample_00121_B23WHTKLT4_1 AGACTAGATG-CGTAACACTA 37233141 36621135 612006 0 0.0097 0.9836 0.0164 0.0000
1 tih_rna_sample_00163_B23WHTKLT4_1 CCTCTATAGA-GTACTTCCAA 23376400 22971032 405368 0 0.0061 0.9827 0.0173 0.0000
1 tih_rna_sample_00136_B23WHTKLT4_1 TACGCTACTT-TTAGCGTCTT 32779628 32294934 484694 0 0.0086 0.9852 0.0148 0.0000
1 tih_rna_sample_00145_B23WHTKLT4_1 CGCACTGGTA-TTGACCGTCT 41994643 41437922 556721 0 0.0110 0.9867 0.0133 0.0000
1 tih_rna_sample_00121_B23WHTKLT4_2 AACTCTCTAC-ACGGCTTCTC 37364903 36640192 724711 0 0.0098 0.9806 0.0194 0.0000
1 tih_rna_sample_00163_B23WHTKLT4_2 GCCACCTAGT-TGCGATGTAT 40156091 39338690 817401 0 0.0105 0.9796 0.0204 0.0000
1 tih_rna_sample_00136_B23WHTKLT4_2 CTCCGCCATA-GCGTTCAGCA 33357963 32852635 505328 0 0.0087 0.9849 0.0151 0.0000
1 tih_rna_sample_00145_B23WHTKLT4_2 TGACACGATT-GCCTAGGAAG 36640063 36033644 606419 0 0.0096 0.9834 0.0166 0.0000
1 tih_rna_sample_00146_B23WHTKLT4_1 CAACTGCGCA-AGTGTATCCG 40140924 39446659 694265 0 0.0105 0.9827 0.0173 0.0000
1 tih_rna_sample_00149_B23WHTKLT4_1 GCAATCTGCT-ACGAACCAAG 29355896 28898999 456897 0 0.0077 0.9844 0.0156 0.0000
1 tih_rna_sample_00150_B23WHTKLT4_1 CTCTATTGAG-CACGCAAGTC 31183683 30381529 802154 0 0.0082 0.9743 0.0257 0.0000
1 tih_rna_sample_00158_B23WHTKLT4_1 CACTTACGGC-GCTGGAGAAG 27759414 27338571 420843 0 0.0073 0.9848 0.0152 0.0000
1 tih_rna_sample_00146_B23WHTKLT4_2 TCAGCATCTA-CCAGTGTACG 49326395 48603980 722415 0 0.0129 0.9854 0.0146 0.0000
1 tih_rna_sample_00149_B23WHTKLT4_2 GTTGCATCAA-GTTGATGCGA 31572723 31163882 408841 0 0.0083 0.9871 0.0129 0.0000
1 tih_rna_sample_00150_B23WHTKLT4_2 ATGACAGCAC-CGCTTGTTAT 48354261 47481799 872462 0 0.0126 0.9820 0.0180 0.0000
1 tih_rna_sample_00158_B23WHTKLT4_2 TAGCGACGGA-GTAACGTTCA 20092029 19716677 375352 0 0.0053 0.9813 0.0187 0.0000
1 tih_rna_sample_00161_B23WHTKLT4_1 GTATGCCACA-CCGAGTCTTC 36307869 35794343 513526 0 0.0095 0.9859 0.0141 0.0000
1 tih_rna_sample_00164_B23WHTKLT4_1 AGTATCCGAT-TATTGCGCTA 31088582 30373091 715491 0 0.0081 0.9770 0.0230 0.0000
1 tih_rna_sample_00166_B23WHTKLT4_1 AACGAAGATC-TGTGGTCTAA 38660199 38058671 601528 0 0.0101 0.9844 0.0156 0.0000
1 tih_rna_sample_00451_B23WHTKLT4_1 CCTCCTGTGA-CACGTCTACG 36116101 35318371 797730 0 0.0094 0.9779 0.0221 0.0000
1 tih_rna_sample_00161_B23WHTKLT4_2 TAGGCGAATG-AGTCCAGTGA 46789142 46151991 637151 0 0.0122 0.9864 0.0136 0.0000
1 tih_rna_sample_00164_B23WHTKLT4_2 AGTAAGGAGA-ATGCTTGGTC 16856275 16604696 251579 0 0.0044 0.9851 0.0149 0.0000
1 tih_rna_sample_00166_B23WHTKLT4_2 CCGAACAGAG-TGATACTCGC 28810544 28242418 568126 0 0.0075 0.9803 0.0197 0.0000
1 tih_rna_sample_00451_B23WHTKLT4_2 AGAACTAACG-TTATCGAGAG 21713898 21394529 319369 0 0.0057 0.9853 0.0147 0.0000
1 tih_rna_sample_00457_B23WHTKLT4_1 GAGCAGCTTG-TGCCAGTATT 50214430 49250458 963972 0 0.0131 0.9808 0.0192 0.0000
1 tih_rna_sample_00462_B23WHTKLT4_1 CCGATAGTAG-GAGTTGCATA 53430566 52168452 1262114 0 0.0140 0.9764 0.0236 0.0000
1 tih_rna_sample_00464_B23WHTKLT4_1 GTGTCTACAG-ACACTAGCAT 34530829 34031093 499736 0 0.0090 0.9855 0.0145 0.0000
1 tih_rna_sample_00467_B23WHTKLT4_1 GTACAGACCG-GTTCTAATGG 36558548 35959959 598589 0 0.0096 0.9836 0.0164 0.0000
1 tih_rna_sample_00457_B23WHTKLT4_2 GCCAACAGAC-CGTTCACGTT 37857373 37300480 556893 0 0.0099 0.9853 0.0147 0.0000
1 tih_rna_sample_00462_B23WHTKLT4_2 CCTCGTTGGA-GACTGCGTTA 39400776 38789415 611361 0 0.0103 0.9845 0.0155 0.0000
1 tih_rna_sample_00464_B23WHTKLT4_2 AATAGGTAGG-TGGCTTATGG 25454540 25129781 324759 0 0.0067 0.9872 0.0128 0.0000
1 tih_rna_sample_00467_B23WHTKLT4_2 TATGCGTAGC-TCAGAGGCAC 38809929 38234830 575099 0 0.0102 0.9852 0.0148 0.0000
1 tih_rna_sample_00473_B23WHTKLT4_1 CCAGTCGTCA-CGCTAGGCTA 59633713 58700281 933432 0 0.0156 0.9843 0.0157 0.0000
1 tih_rna_sample_00461_B23WHTKLT4_1 AGAAGACCTA-AACCGTAACA 6415910 6281736 134174 0 0.0017 0.9791 0.0209 0.0000
1 tih_rna_sample_00479_B23WHTKLT4_1 CCGTGAGTTC-CTTGGTATGA 46192677 45573343 619334 0 0.0121 0.9866 0.0134 0.0000
1 tih_rna_sample_00480_B23WHTKLT4_1 TCAATTCCGA-TGTAGATCCG 35646285 35225228 421057 0 0.0093 0.9882 0.0118 0.0000
1 tih_rna_sample_00473_B23WHTKLT4_2 CGGAACACAA-AACTCTACCG 64950934 63865521 1085413 0 0.0170 0.9833 0.0167 0.0000
1 tih_rna_sample_00461_B23WHTKLT4_2 CTATAACGGA-CGTGACATTC 24193050 23822617 370433 0 0.0063 0.9847 0.0153 0.0000
1 tih_rna_sample_00479_B23WHTKLT4_2 AGATGTAAGG-CTGTACCAGG 23601172 23278851 322321 0 0.0062 0.9863 0.0137 0.0000
1 tih_rna_sample_00480_B23WHTKLT4_2 ATGCTTACTG-ACTGGTTCCG 45295389 44604805 690584 0 0.0118 0.9848 0.0152 0.0000
1 Undetermined 244051853 244051853 0 0 0.0638 1.0000 0.0000 0.0000
98 rows