Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads 1,659_c95-T1-TRNA-1_B23WHTKLT4_1,TAACTTGGTC-GTCGTGAATC,42169465,41537883,631582,0,0.0110,0.9850,0.0150,0.0000 1,659_ciJ-T1-TRNA-1_B23WHTKLT4_1,ATAAGCGGAG-CTGTTCTACG,35802109,34788490,1013619,0,0.0094,0.9717,0.0283,0.0000 1,659_bhK-T1-TRNA-1_B23WHTKLT4_1,AGTAGTGTTG-AACACCTCTT,59438606,58572769,865837,0,0.0155,0.9854,0.0146,0.0000 1,659_Lx-T1-TRNA-1_B23WHTKLT4_1,ATGTTGCCAC-TAGAAGCCAT,31428114,30934865,493249,0,0.0082,0.9843,0.0157,0.0000 1,659_bUW-T1-TRNA-1_B23WHTKLT4_1,CAGCAGGTCA-CACTTAGGTA,76227333,75333862,893471,0,0.0199,0.9883,0.0117,0.0000 1,659_d01-T1-TRNA-1_B23WHTKLT4_1,TCTAGCTGCG-ATAGGTAAGG,30929605,30438365,491240,0,0.0081,0.9841,0.0159,0.0000 1,659_bNS-T1-TRNA-1_B23WHTKLT4_1,AGATTAGCGT-CGCCTTATAT,42185842,41080554,1105288,0,0.0110,0.9738,0.0262,0.0000 1,659_buD-T1-TRNA-1_B23WHTKLT4_1,AGGTAACAAC-GCACGATGCT,27421571,27017997,403574,0,0.0072,0.9853,0.0147,0.0000 1,659_Dl-T1-TRNA-1_B23WHTKLT4_1,CGCACTTCGT-AATATGCCAG,18966615,18692866,273749,0,0.0050,0.9856,0.0144,0.0000 1,659_dES-T1-TRNA-1_B23WHTKLT4_1,CTTGCTATTC-TAGAGTCACG,41122584,40478385,644199,0,0.0108,0.9843,0.0157,0.0000 1,659_ecd-T1-TRNA-1_B23WHTKLT4_1,TCTCACCAGG-TTAACAGGTC,41252764,40504114,748650,0,0.0108,0.9819,0.0181,0.0000 1,659_cfy-T1-TRNA-1_B23WHTKLT4_1,TTCCTCACGT-ACATGAGCCA,50965503,50220262,745241,0,0.0133,0.9854,0.0146,0.0000 1,659_bGc-T1-TRNA-1_B23WHTKLT4_1,TCGAACACGA-GCGAGGTTCT,24032035,23680515,351520,0,0.0063,0.9854,0.0146,0.0000 1,659_dts-T1-TRNA-1_B23WHTKLT4_1,TCCAACTGAA-TGTCCGTAGG,25985431,25513157,472274,0,0.0068,0.9818,0.0182,0.0000 1,659_cRa-T1-TRNA-1_B23WHTKLT4_1,GAACCGCATT-CATTATGCCT,54792453,54041743,750710,0,0.0143,0.9863,0.0137,0.0000 1,659_cTi-T1-TRNA-1_B23WHTKLT4_1,ACAACAGGCT-TCCACTGTTG,47208290,46566811,641479,0,0.0123,0.9864,0.0136,0.0000 1,659_bGW-T1-TRNA-1_B23WHTKLT4_1,TTACGCGCAT-CTTAACGACA,58103176,57311574,791602,0,0.0152,0.9864,0.0136,0.0000 1,659_bQZ-T1-TRNA-1_B23WHTKLT4_1,TTCTCTTAGC-TCCTCGAGCT,34475178,33994024,481154,0,0.0090,0.9860,0.0140,0.0000 1,659_ezg-T1-TRNA-1_B23WHTKLT4_1,TCGCGACACT-CGAGTAATGT,49947329,49244964,702365,0,0.0131,0.9859,0.0141,0.0000 1,659_bTo-T1-TRNA-1_B23WHTKLT4_1,TGGAGATCGA-CAGCGGTATG,53604792,52439532,1165260,0,0.0140,0.9783,0.0217,0.0000 1,659_Mt-T1-TRNA-1_B23WHTKLT4_1,CCAGACCGAT-GCTACTTGCA,20794476,20418705,375771,0,0.0054,0.9819,0.0181,0.0000 1,659_djb-T1-TRNA-1_B23WHTKLT4_1,CCACAGCCTT-GCTATTGAAG,37394659,36780869,613790,0,0.0098,0.9836,0.0164,0.0000 1,659_gK-T1-TRNA-1_B23WHTKLT4_1,ACCGAATAGA-TCAGCATCCG,23294607,22933718,360889,0,0.0061,0.9845,0.0155,0.0000 1,659_rd-T1-TRNA-1_B23WHTKLT4_1,CGGACGATTC-TAGGTGGTGG,42371692,41838422,533270,0,0.0111,0.9874,0.0126,0.0000 1,659_epP-T1-TRNA-1_B23WHTKLT4_1,TTACTTCGTG-AAGATCGGAT,40328107,39753847,574260,0,0.0105,0.9858,0.0142,0.0000 1,659_ciZ-T1-TRNA-1_B23WHTKLT4_1,ATTCGGCTTA-TTAACGTCCG,39641506,39123148,518358,0,0.0104,0.9869,0.0131,0.0000 1,659_cAd-T1-TRNA-1_B23WHTKLT4_1,CGCGGTATCT-ATTACCGATC,39979792,39464398,515394,0,0.0105,0.9871,0.0129,0.0000 1,659_cRB-T1-TRNA-1_B23WHTKLT4_1,TATCCGCGTC-GTTGCATCGT,30779770,30277251,502519,0,0.0081,0.9837,0.0163,0.0000 1,659_dcz-T1-TRNA-1_B23WHTKLT4_1,AGGATGTCCA-ACTGGACGTT,6131682,6031285,100397,0,0.0016,0.9836,0.0164,0.0000 1,659_dc8-T1-TRNA-1_B23WHTKLT4_1,GCCAGCTATC-TTGTTCGTGT,38535771,37988455,547316,0,0.0101,0.9858,0.0142,0.0000 1,659_cWx-T1-TRNA-1_B23WHTKLT4_1,CTTACGAACT-ACGGACTGAG,36935619,36319868,615751,0,0.0097,0.9833,0.0167,0.0000 1,659_cVw-T1-TRNA-1_B23WHTKLT4_1,CAAGACTCAA-CACCGTCATA,46736476,45989278,747198,0,0.0122,0.9840,0.0160,0.0000 1,659_dm4-T1-TRNA-1_B23WHTKLT4_1,TCGACGGCAA-GTAGTTGTGT,12932676,12747892,184784,0,0.0034,0.9857,0.0143,0.0000 1,659_6i-T1-TRNA-1_B23WHTKLT4_1,TCAGTTCGAT-CTGAGTCCTT,24276356,23909482,366874,0,0.0063,0.9849,0.0151,0.0000 1,659_bCu-T1-TRNA-1_B23WHTKLT4_1,CTAACCTCAA-TCACAGTTGC,8663013,8501656,161357,0,0.0023,0.9814,0.0186,0.0000 1,659_cIX-T1-TRNA-1_B23WHTKLT4_1,GACCTACTAT-ATTGTAAGCG,38073366,37478414,594952,0,0.0100,0.9844,0.0156,0.0000 1,659_bua-T1-TRNA-1_B23WHTKLT4_1,ACGAGACGTC-CGGTCTCTCT,33170557,32644997,525560,0,0.0087,0.9842,0.0158,0.0000 1,FFPE_HD789_01_RNA_13_B23WHTKLT4_1,TATGGCAAGC-AACAGCAATG,63635726,62687503,948223,0,0.0166,0.9851,0.0149,0.0000 1,FFPE_V4_0002_RNA_0001_B23WHTKLT4_1,ACTCCGAAGC-TCCGTGTTGC,39128750,38643676,485074,0,0.0102,0.9876,0.0124,0.0000 1,NTC_0001_0001_B23WHTKLT4_1,AATCTGCAGT-TGCGAAGTGA,105948,104444,1504,0,0.0000,0.9858,0.0142,0.0000 1,tih_rna_sample_00434_B23WHTKLT4_1,AGTTCAGGCG-CACAGCTATT,52131650,51403699,727951,0,0.0136,0.9860,0.0140,0.0000 1,tih_rna_sample_00096_B23WHTKLT4_1,CGCCAAGGTA-GATAGTGTTC,40904226,40288033,616193,0,0.0107,0.9849,0.0151,0.0000 1,tih_rna_sample_00097_B23WHTKLT4_1,CCTGACATCT-TAGCTACCAG,50960606,49770385,1190221,0,0.0133,0.9766,0.0234,0.0000 1,tih_rna_sample_00087_B23WHTKLT4_1,CGAGCGTAGT-TGCTCACGCA,61734731,60944669,790062,0,0.0161,0.9872,0.0128,0.0000 1,tih_rna_sample_00434_B23WHTKLT4_2,CTGGATTACT-AAGTGTGCTA,51041169,50447184,593985,0,0.0134,0.9884,0.0116,0.0000 1,tih_rna_sample_00096_B23WHTKLT4_2,AGCAATTCAC-TCATCGTCTG,49375097,48714174,660923,0,0.0129,0.9866,0.0134,0.0000 1,tih_rna_sample_00097_B23WHTKLT4_2,ATATTCTCGG-AGATGCTCCG,42334473,41602234,732239,0,0.0111,0.9827,0.0173,0.0000 1,tih_rna_sample_00087_B23WHTKLT4_2,GACTCATCCA-GAACCAAGCG,54543106,53692767,850339,0,0.0143,0.9844,0.0156,0.0000 1,tih_rna_sample_00124_B23WHTKLT4_1,CATAAGCGAC-CCTCTTCAAG,28740974,28266626,474348,0,0.0075,0.9835,0.0165,0.0000 1,tih_rna_sample_00090_B23WHTKLT4_1,CCTAAGCTGA-CGTCGCATCT,26414150,25980633,433517,0,0.0069,0.9836,0.0164,0.0000 1,tih_rna_sample_00116_B23WHTKLT4_1,CGATGTCTTG-CCGAACGTTC,39640388,39071177,569211,0,0.0104,0.9856,0.0144,0.0000 1,tih_rna_sample_00089_B23WHTKLT4_1,GAGATGAGAG-GAATGGCGTT,23155694,22587674,568020,0,0.0061,0.9755,0.0245,0.0000 1,tih_rna_sample_00124_B23WHTKLT4_2,TCACCATAAG-AAGTTCAGGA,28202737,27779429,423308,0,0.0074,0.9850,0.0150,0.0000 1,tih_rna_sample_00090_B23WHTKLT4_2,ACTTCCGGCA-GACCAATTGT,41432156,40897429,534727,0,0.0108,0.9871,0.0129,0.0000 1,tih_rna_sample_00116_B23WHTKLT4_2,AAGCGCTTAG-TGTCTGTGAC,35322778,34644243,678535,0,0.0092,0.9808,0.0192,0.0000 1,tih_rna_sample_00089_B23WHTKLT4_2,AACAACACAG-GAACATTGGC,45078835,44405090,673745,0,0.0118,0.9851,0.0149,0.0000 1,tih_rna_sample_00121_B23WHTKLT4_1,AGACTAGATG-CGTAACACTA,37233141,36621135,612006,0,0.0097,0.9836,0.0164,0.0000 1,tih_rna_sample_00163_B23WHTKLT4_1,CCTCTATAGA-GTACTTCCAA,23376400,22971032,405368,0,0.0061,0.9827,0.0173,0.0000 1,tih_rna_sample_00136_B23WHTKLT4_1,TACGCTACTT-TTAGCGTCTT,32779628,32294934,484694,0,0.0086,0.9852,0.0148,0.0000 1,tih_rna_sample_00145_B23WHTKLT4_1,CGCACTGGTA-TTGACCGTCT,41994643,41437922,556721,0,0.0110,0.9867,0.0133,0.0000 1,tih_rna_sample_00121_B23WHTKLT4_2,AACTCTCTAC-ACGGCTTCTC,37364903,36640192,724711,0,0.0098,0.9806,0.0194,0.0000 1,tih_rna_sample_00163_B23WHTKLT4_2,GCCACCTAGT-TGCGATGTAT,40156091,39338690,817401,0,0.0105,0.9796,0.0204,0.0000 1,tih_rna_sample_00136_B23WHTKLT4_2,CTCCGCCATA-GCGTTCAGCA,33357963,32852635,505328,0,0.0087,0.9849,0.0151,0.0000 1,tih_rna_sample_00145_B23WHTKLT4_2,TGACACGATT-GCCTAGGAAG,36640063,36033644,606419,0,0.0096,0.9834,0.0166,0.0000 1,tih_rna_sample_00146_B23WHTKLT4_1,CAACTGCGCA-AGTGTATCCG,40140924,39446659,694265,0,0.0105,0.9827,0.0173,0.0000 1,tih_rna_sample_00149_B23WHTKLT4_1,GCAATCTGCT-ACGAACCAAG,29355896,28898999,456897,0,0.0077,0.9844,0.0156,0.0000 1,tih_rna_sample_00150_B23WHTKLT4_1,CTCTATTGAG-CACGCAAGTC,31183683,30381529,802154,0,0.0082,0.9743,0.0257,0.0000 1,tih_rna_sample_00158_B23WHTKLT4_1,CACTTACGGC-GCTGGAGAAG,27759414,27338571,420843,0,0.0073,0.9848,0.0152,0.0000 1,tih_rna_sample_00146_B23WHTKLT4_2,TCAGCATCTA-CCAGTGTACG,49326395,48603980,722415,0,0.0129,0.9854,0.0146,0.0000 1,tih_rna_sample_00149_B23WHTKLT4_2,GTTGCATCAA-GTTGATGCGA,31572723,31163882,408841,0,0.0083,0.9871,0.0129,0.0000 1,tih_rna_sample_00150_B23WHTKLT4_2,ATGACAGCAC-CGCTTGTTAT,48354261,47481799,872462,0,0.0126,0.9820,0.0180,0.0000 1,tih_rna_sample_00158_B23WHTKLT4_2,TAGCGACGGA-GTAACGTTCA,20092029,19716677,375352,0,0.0053,0.9813,0.0187,0.0000 1,tih_rna_sample_00161_B23WHTKLT4_1,GTATGCCACA-CCGAGTCTTC,36307869,35794343,513526,0,0.0095,0.9859,0.0141,0.0000 1,tih_rna_sample_00164_B23WHTKLT4_1,AGTATCCGAT-TATTGCGCTA,31088582,30373091,715491,0,0.0081,0.9770,0.0230,0.0000 1,tih_rna_sample_00166_B23WHTKLT4_1,AACGAAGATC-TGTGGTCTAA,38660199,38058671,601528,0,0.0101,0.9844,0.0156,0.0000 1,tih_rna_sample_00451_B23WHTKLT4_1,CCTCCTGTGA-CACGTCTACG,36116101,35318371,797730,0,0.0094,0.9779,0.0221,0.0000 1,tih_rna_sample_00161_B23WHTKLT4_2,TAGGCGAATG-AGTCCAGTGA,46789142,46151991,637151,0,0.0122,0.9864,0.0136,0.0000 1,tih_rna_sample_00164_B23WHTKLT4_2,AGTAAGGAGA-ATGCTTGGTC,16856275,16604696,251579,0,0.0044,0.9851,0.0149,0.0000 1,tih_rna_sample_00166_B23WHTKLT4_2,CCGAACAGAG-TGATACTCGC,28810544,28242418,568126,0,0.0075,0.9803,0.0197,0.0000 1,tih_rna_sample_00451_B23WHTKLT4_2,AGAACTAACG-TTATCGAGAG,21713898,21394529,319369,0,0.0057,0.9853,0.0147,0.0000 1,tih_rna_sample_00457_B23WHTKLT4_1,GAGCAGCTTG-TGCCAGTATT,50214430,49250458,963972,0,0.0131,0.9808,0.0192,0.0000 1,tih_rna_sample_00462_B23WHTKLT4_1,CCGATAGTAG-GAGTTGCATA,53430566,52168452,1262114,0,0.0140,0.9764,0.0236,0.0000 1,tih_rna_sample_00464_B23WHTKLT4_1,GTGTCTACAG-ACACTAGCAT,34530829,34031093,499736,0,0.0090,0.9855,0.0145,0.0000 1,tih_rna_sample_00467_B23WHTKLT4_1,GTACAGACCG-GTTCTAATGG,36558548,35959959,598589,0,0.0096,0.9836,0.0164,0.0000 1,tih_rna_sample_00457_B23WHTKLT4_2,GCCAACAGAC-CGTTCACGTT,37857373,37300480,556893,0,0.0099,0.9853,0.0147,0.0000 1,tih_rna_sample_00462_B23WHTKLT4_2,CCTCGTTGGA-GACTGCGTTA,39400776,38789415,611361,0,0.0103,0.9845,0.0155,0.0000 1,tih_rna_sample_00464_B23WHTKLT4_2,AATAGGTAGG-TGGCTTATGG,25454540,25129781,324759,0,0.0067,0.9872,0.0128,0.0000 1,tih_rna_sample_00467_B23WHTKLT4_2,TATGCGTAGC-TCAGAGGCAC,38809929,38234830,575099,0,0.0102,0.9852,0.0148,0.0000 1,tih_rna_sample_00473_B23WHTKLT4_1,CCAGTCGTCA-CGCTAGGCTA,59633713,58700281,933432,0,0.0156,0.9843,0.0157,0.0000 1,tih_rna_sample_00461_B23WHTKLT4_1,AGAAGACCTA-AACCGTAACA,6415910,6281736,134174,0,0.0017,0.9791,0.0209,0.0000 1,tih_rna_sample_00479_B23WHTKLT4_1,CCGTGAGTTC-CTTGGTATGA,46192677,45573343,619334,0,0.0121,0.9866,0.0134,0.0000 1,tih_rna_sample_00480_B23WHTKLT4_1,TCAATTCCGA-TGTAGATCCG,35646285,35225228,421057,0,0.0093,0.9882,0.0118,0.0000 1,tih_rna_sample_00473_B23WHTKLT4_2,CGGAACACAA-AACTCTACCG,64950934,63865521,1085413,0,0.0170,0.9833,0.0167,0.0000 1,tih_rna_sample_00461_B23WHTKLT4_2,CTATAACGGA-CGTGACATTC,24193050,23822617,370433,0,0.0063,0.9847,0.0153,0.0000 1,tih_rna_sample_00479_B23WHTKLT4_2,AGATGTAAGG-CTGTACCAGG,23601172,23278851,322321,0,0.0062,0.9863,0.0137,0.0000 1,tih_rna_sample_00480_B23WHTKLT4_2,ATGCTTACTG-ACTGGTTCCG,45295389,44604805,690584,0,0.0118,0.9848,0.0152,0.0000 1,Undetermined,,244051853,244051853,0,0,0.0638,1.0000,0.0000,0.0000