File Info

Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0020/B23WHTKLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L003/Reports/Demultiplex_Stats.csv
Size
10.7 KB
Workflow Run
dev_rna_exp0020-73d51683
Published
Jun 07, 2026 11:59 PM

Content

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Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
3 659_c95-T1-TRNA-1_B23WHTKLT4_1 TAACTTGGTC-GTCGTGAATC 42467225 41788579 678646 0 0.0110 0.9840 0.0160 0.0000
3 659_ciJ-T1-TRNA-1_B23WHTKLT4_1 ATAAGCGGAG-CTGTTCTACG 36069961 34978025 1091936 0 0.0094 0.9697 0.0303 0.0000
3 659_bhK-T1-TRNA-1_B23WHTKLT4_1 AGTAGTGTTG-AACACCTCTT 60051852 59103347 948505 0 0.0156 0.9842 0.0158 0.0000
3 659_Lx-T1-TRNA-1_B23WHTKLT4_1 ATGTTGCCAC-TAGAAGCCAT 31478018 30936392 541626 0 0.0082 0.9828 0.0172 0.0000
3 659_bUW-T1-TRNA-1_B23WHTKLT4_1 CAGCAGGTCA-CACTTAGGTA 76800428 75823640 976788 0 0.0199 0.9873 0.0127 0.0000
3 659_d01-T1-TRNA-1_B23WHTKLT4_1 TCTAGCTGCG-ATAGGTAAGG 30928498 30400261 528237 0 0.0080 0.9829 0.0171 0.0000
3 659_bNS-T1-TRNA-1_B23WHTKLT4_1 AGATTAGCGT-CGCCTTATAT 42565632 41384805 1180827 0 0.0111 0.9723 0.0277 0.0000
3 659_buD-T1-TRNA-1_B23WHTKLT4_1 AGGTAACAAC-GCACGATGCT 27574527 27140766 433761 0 0.0072 0.9843 0.0157 0.0000
3 659_Dl-T1-TRNA-1_B23WHTKLT4_1 CGCACTTCGT-AATATGCCAG 19070072 18771108 298964 0 0.0050 0.9843 0.0157 0.0000
3 659_dES-T1-TRNA-1_B23WHTKLT4_1 CTTGCTATTC-TAGAGTCACG 41273079 40567919 705160 0 0.0107 0.9829 0.0171 0.0000
3 659_ecd-T1-TRNA-1_B23WHTKLT4_1 TCTCACCAGG-TTAACAGGTC 41472904 40646780 826124 0 0.0108 0.9801 0.0199 0.0000
3 659_cfy-T1-TRNA-1_B23WHTKLT4_1 TTCCTCACGT-ACATGAGCCA 51333611 50511685 821926 0 0.0133 0.9840 0.0160 0.0000
3 659_bGc-T1-TRNA-1_B23WHTKLT4_1 TCGAACACGA-GCGAGGTTCT 24131827 23758013 373814 0 0.0063 0.9845 0.0155 0.0000
3 659_dts-T1-TRNA-1_B23WHTKLT4_1 TCCAACTGAA-TGTCCGTAGG 26019597 25513587 506010 0 0.0068 0.9806 0.0194 0.0000
3 659_cRa-T1-TRNA-1_B23WHTKLT4_1 GAACCGCATT-CATTATGCCT 55281405 54463897 817508 0 0.0144 0.9852 0.0148 0.0000
3 659_cTi-T1-TRNA-1_B23WHTKLT4_1 ACAACAGGCT-TCCACTGTTG 47417616 46712899 704717 0 0.0123 0.9851 0.0149 0.0000
3 659_bGW-T1-TRNA-1_B23WHTKLT4_1 TTACGCGCAT-CTTAACGACA 58456019 57589403 866616 0 0.0152 0.9852 0.0148 0.0000
3 659_bQZ-T1-TRNA-1_B23WHTKLT4_1 TTCTCTTAGC-TCCTCGAGCT 34601860 34055336 546524 0 0.0090 0.9842 0.0158 0.0000
3 659_ezg-T1-TRNA-1_B23WHTKLT4_1 TCGCGACACT-CGAGTAATGT 50224504 49463624 760880 0 0.0130 0.9849 0.0151 0.0000
3 659_bTo-T1-TRNA-1_B23WHTKLT4_1 TGGAGATCGA-CAGCGGTATG 53775423 52519530 1255893 0 0.0140 0.9766 0.0234 0.0000
3 659_Mt-T1-TRNA-1_B23WHTKLT4_1 CCAGACCGAT-GCTACTTGCA 20923467 20512795 410672 0 0.0054 0.9804 0.0196 0.0000
3 659_djb-T1-TRNA-1_B23WHTKLT4_1 CCACAGCCTT-GCTATTGAAG 37638682 36978588 660094 0 0.0098 0.9825 0.0175 0.0000
3 659_gK-T1-TRNA-1_B23WHTKLT4_1 ACCGAATAGA-TCAGCATCCG 23425941 23037915 388026 0 0.0061 0.9834 0.0166 0.0000
3 659_rd-T1-TRNA-1_B23WHTKLT4_1 CGGACGATTC-TAGGTGGTGG 42455131 41878238 576893 0 0.0110 0.9864 0.0136 0.0000
3 659_epP-T1-TRNA-1_B23WHTKLT4_1 TTACTTCGTG-AAGATCGGAT 40527956 39898723 629233 0 0.0105 0.9845 0.0155 0.0000
3 659_ciZ-T1-TRNA-1_B23WHTKLT4_1 ATTCGGCTTA-TTAACGTCCG 39841903 39276602 565301 0 0.0103 0.9858 0.0142 0.0000
3 659_cAd-T1-TRNA-1_B23WHTKLT4_1 CGCGGTATCT-ATTACCGATC 40121294 39556245 565049 0 0.0104 0.9859 0.0141 0.0000
3 659_cRB-T1-TRNA-1_B23WHTKLT4_1 TATCCGCGTC-GTTGCATCGT 30813041 30276459 536582 0 0.0080 0.9826 0.0174 0.0000
3 659_dcz-T1-TRNA-1_B23WHTKLT4_1 AGGATGTCCA-ACTGGACGTT 6142831 6034863 107968 0 0.0016 0.9824 0.0176 0.0000
3 659_dc8-T1-TRNA-1_B23WHTKLT4_1 GCCAGCTATC-TTGTTCGTGT 38707379 38114173 593206 0 0.0101 0.9847 0.0153 0.0000
3 659_cWx-T1-TRNA-1_B23WHTKLT4_1 CTTACGAACT-ACGGACTGAG 37268599 36598775 669824 0 0.0097 0.9820 0.0180 0.0000
3 659_cVw-T1-TRNA-1_B23WHTKLT4_1 CAAGACTCAA-CACCGTCATA 47075613 46266892 808721 0 0.0122 0.9828 0.0172 0.0000
3 659_dm4-T1-TRNA-1_B23WHTKLT4_1 TCGACGGCAA-GTAGTTGTGT 12872954 12673716 199238 0 0.0033 0.9845 0.0155 0.0000
3 659_6i-T1-TRNA-1_B23WHTKLT4_1 TCAGTTCGAT-CTGAGTCCTT 24499229 24096417 402812 0 0.0064 0.9836 0.0164 0.0000
3 659_bCu-T1-TRNA-1_B23WHTKLT4_1 CTAACCTCAA-TCACAGTTGC 8670477 8496439 174038 0 0.0023 0.9799 0.0201 0.0000
3 659_cIX-T1-TRNA-1_B23WHTKLT4_1 GACCTACTAT-ATTGTAAGCG 38342664 37691318 651346 0 0.0100 0.9830 0.0170 0.0000
3 659_bua-T1-TRNA-1_B23WHTKLT4_1 ACGAGACGTC-CGGTCTCTCT 33372502 32804862 567640 0 0.0087 0.9830 0.0170 0.0000
3 FFPE_HD789_01_RNA_13_B23WHTKLT4_1 TATGGCAAGC-AACAGCAATG 64216601 63194817 1021784 0 0.0167 0.9841 0.0159 0.0000
3 FFPE_V4_0002_RNA_0001_B23WHTKLT4_1 ACTCCGAAGC-TCCGTGTTGC 39343632 38814388 529244 0 0.0102 0.9865 0.0135 0.0000
3 NTC_0001_0001_B23WHTKLT4_1 AATCTGCAGT-TGCGAAGTGA 105531 103906 1625 0 0.0000 0.9846 0.0154 0.0000
3 tih_rna_sample_00434_B23WHTKLT4_1 AGTTCAGGCG-CACAGCTATT 52493655 51703584 790071 0 0.0136 0.9849 0.0151 0.0000
3 tih_rna_sample_00096_B23WHTKLT4_1 CGCCAAGGTA-GATAGTGTTC 41110692 40440623 670069 0 0.0107 0.9837 0.0163 0.0000
3 tih_rna_sample_00097_B23WHTKLT4_1 CCTGACATCT-TAGCTACCAG 51081995 49723248 1358747 0 0.0133 0.9734 0.0266 0.0000
3 tih_rna_sample_00087_B23WHTKLT4_1 CGAGCGTAGT-TGCTCACGCA 61972785 61114815 857970 0 0.0161 0.9862 0.0138 0.0000
3 tih_rna_sample_00434_B23WHTKLT4_2 CTGGATTACT-AAGTGTGCTA 51326611 50674916 651695 0 0.0133 0.9873 0.0127 0.0000
3 tih_rna_sample_00096_B23WHTKLT4_2 AGCAATTCAC-TCATCGTCTG 49677732 48951561 726171 0 0.0129 0.9854 0.0146 0.0000
3 tih_rna_sample_00097_B23WHTKLT4_2 ATATTCTCGG-AGATGCTCCG 42228755 41425891 802864 0 0.0110 0.9810 0.0190 0.0000
3 tih_rna_sample_00087_B23WHTKLT4_2 GACTCATCCA-GAACCAAGCG 54688442 53778745 909697 0 0.0142 0.9834 0.0166 0.0000
3 tih_rna_sample_00124_B23WHTKLT4_1 CATAAGCGAC-CCTCTTCAAG 28920918 28398751 522167 0 0.0075 0.9819 0.0181 0.0000
3 tih_rna_sample_00090_B23WHTKLT4_1 CCTAAGCTGA-CGTCGCATCT 26536642 26068641 468001 0 0.0069 0.9824 0.0176 0.0000
3 tih_rna_sample_00116_B23WHTKLT4_1 CGATGTCTTG-CCGAACGTTC 39874623 39255769 618854 0 0.0104 0.9845 0.0155 0.0000
3 tih_rna_sample_00089_B23WHTKLT4_1 GAGATGAGAG-GAATGGCGTT 23270833 22657380 613453 0 0.0060 0.9736 0.0264 0.0000
3 tih_rna_sample_00124_B23WHTKLT4_2 TCACCATAAG-AAGTTCAGGA 28354851 27897869 456982 0 0.0074 0.9839 0.0161 0.0000
3 tih_rna_sample_00090_B23WHTKLT4_2 ACTTCCGGCA-GACCAATTGT 41531412 40949611 581801 0 0.0108 0.9860 0.0140 0.0000
3 tih_rna_sample_00116_B23WHTKLT4_2 AAGCGCTTAG-TGTCTGTGAC 35483686 34747383 736303 0 0.0092 0.9792 0.0208 0.0000
3 tih_rna_sample_00089_B23WHTKLT4_2 AACAACACAG-GAACATTGGC 45327655 44603218 724437 0 0.0118 0.9840 0.0160 0.0000
3 tih_rna_sample_00121_B23WHTKLT4_1 AGACTAGATG-CGTAACACTA 37411044 36747899 663145 0 0.0097 0.9823 0.0177 0.0000
3 tih_rna_sample_00163_B23WHTKLT4_1 CCTCTATAGA-GTACTTCCAA 23478513 23036935 441578 0 0.0061 0.9812 0.0188 0.0000
3 tih_rna_sample_00136_B23WHTKLT4_1 TACGCTACTT-TTAGCGTCTT 33039626 32517677 521949 0 0.0086 0.9842 0.0158 0.0000
3 tih_rna_sample_00145_B23WHTKLT4_1 CGCACTGGTA-TTGACCGTCT 42311881 41703452 608429 0 0.0110 0.9856 0.0144 0.0000
3 tih_rna_sample_00121_B23WHTKLT4_2 AACTCTCTAC-ACGGCTTCTC 37613099 36804099 809000 0 0.0098 0.9785 0.0215 0.0000
3 tih_rna_sample_00163_B23WHTKLT4_2 GCCACCTAGT-TGCGATGTAT 40383111 39497368 885743 0 0.0105 0.9781 0.0219 0.0000
3 tih_rna_sample_00136_B23WHTKLT4_2 CTCCGCCATA-GCGTTCAGCA 33466306 32918256 548050 0 0.0087 0.9836 0.0164 0.0000
3 tih_rna_sample_00145_B23WHTKLT4_2 TGACACGATT-GCCTAGGAAG 36882256 36227530 654726 0 0.0096 0.9822 0.0178 0.0000
3 tih_rna_sample_00146_B23WHTKLT4_1 CAACTGCGCA-AGTGTATCCG 40119574 39365183 754391 0 0.0104 0.9812 0.0188 0.0000
3 tih_rna_sample_00149_B23WHTKLT4_1 GCAATCTGCT-ACGAACCAAG 29394318 28897683 496635 0 0.0076 0.9831 0.0169 0.0000
3 tih_rna_sample_00150_B23WHTKLT4_1 CTCTATTGAG-CACGCAAGTC 31321939 30461381 860558 0 0.0081 0.9725 0.0275 0.0000
3 tih_rna_sample_00158_B23WHTKLT4_1 CACTTACGGC-GCTGGAGAAG 27838381 27387437 450944 0 0.0072 0.9838 0.0162 0.0000
3 tih_rna_sample_00146_B23WHTKLT4_2 TCAGCATCTA-CCAGTGTACG 49637289 48852647 784642 0 0.0129 0.9842 0.0158 0.0000
3 tih_rna_sample_00149_B23WHTKLT4_2 GTTGCATCAA-GTTGATGCGA 31605184 31164262 440922 0 0.0082 0.9860 0.0140 0.0000
3 tih_rna_sample_00150_B23WHTKLT4_2 ATGACAGCAC-CGCTTGTTAT 48540139 47604108 936031 0 0.0126 0.9807 0.0193 0.0000
3 tih_rna_sample_00158_B23WHTKLT4_2 TAGCGACGGA-GTAACGTTCA 20207738 19805509 402229 0 0.0052 0.9801 0.0199 0.0000
3 tih_rna_sample_00161_B23WHTKLT4_1 GTATGCCACA-CCGAGTCTTC 36341254 35774131 567123 0 0.0094 0.9844 0.0156 0.0000
3 tih_rna_sample_00164_B23WHTKLT4_1 AGTATCCGAT-TATTGCGCTA 31354615 30574329 780286 0 0.0081 0.9751 0.0249 0.0000
3 tih_rna_sample_00166_B23WHTKLT4_1 AACGAAGATC-TGTGGTCTAA 38773066 38117876 655190 0 0.0101 0.9831 0.0169 0.0000
3 tih_rna_sample_00451_B23WHTKLT4_1 CCTCCTGTGA-CACGTCTACG 36242898 35363583 879315 0 0.0094 0.9757 0.0243 0.0000
3 tih_rna_sample_00161_B23WHTKLT4_2 TAGGCGAATG-AGTCCAGTGA 47093297 46402474 690823 0 0.0122 0.9853 0.0147 0.0000
3 tih_rna_sample_00164_B23WHTKLT4_2 AGTAAGGAGA-ATGCTTGGTC 16969946 16701321 268625 0 0.0044 0.9842 0.0158 0.0000
3 tih_rna_sample_00166_B23WHTKLT4_2 CCGAACAGAG-TGATACTCGC 28849739 28242469 607270 0 0.0075 0.9790 0.0210 0.0000
3 tih_rna_sample_00451_B23WHTKLT4_2 AGAACTAACG-TTATCGAGAG 21768538 21424026 344512 0 0.0057 0.9842 0.0158 0.0000
3 tih_rna_sample_00457_B23WHTKLT4_1 GAGCAGCTTG-TGCCAGTATT 50503449 49475719 1027730 0 0.0131 0.9797 0.0203 0.0000
3 tih_rna_sample_00462_B23WHTKLT4_1 CCGATAGTAG-GAGTTGCATA 53619776 52260365 1359411 0 0.0139 0.9746 0.0254 0.0000
3 tih_rna_sample_00464_B23WHTKLT4_1 GTGTCTACAG-ACACTAGCAT 34764208 34217826 546382 0 0.0090 0.9843 0.0157 0.0000
3 tih_rna_sample_00467_B23WHTKLT4_1 GTACAGACCG-GTTCTAATGG 36653023 36013198 639825 0 0.0095 0.9825 0.0175 0.0000
3 tih_rna_sample_00457_B23WHTKLT4_2 GCCAACAGAC-CGTTCACGTT 38004235 37401052 603183 0 0.0099 0.9841 0.0159 0.0000
3 tih_rna_sample_00462_B23WHTKLT4_2 CCTCGTTGGA-GACTGCGTTA 39728552 39065594 662958 0 0.0103 0.9833 0.0167 0.0000
3 tih_rna_sample_00464_B23WHTKLT4_2 AATAGGTAGG-TGGCTTATGG 25593666 25239672 353994 0 0.0066 0.9862 0.0138 0.0000
3 tih_rna_sample_00467_B23WHTKLT4_2 TATGCGTAGC-TCAGAGGCAC 38885021 38263661 621360 0 0.0101 0.9840 0.0160 0.0000
3 tih_rna_sample_00473_B23WHTKLT4_1 CCAGTCGTCA-CGCTAGGCTA 59819550 58810344 1009206 0 0.0155 0.9831 0.0169 0.0000
3 tih_rna_sample_00461_B23WHTKLT4_1 AGAAGACCTA-AACCGTAACA 6469236 6324584 144652 0 0.0017 0.9776 0.0224 0.0000
3 tih_rna_sample_00479_B23WHTKLT4_1 CCGTGAGTTC-CTTGGTATGA 46488846 45812255 676591 0 0.0121 0.9854 0.0146 0.0000
3 tih_rna_sample_00480_B23WHTKLT4_1 TCAATTCCGA-TGTAGATCCG 35643423 35185676 457747 0 0.0093 0.9872 0.0128 0.0000
3 tih_rna_sample_00473_B23WHTKLT4_2 CGGAACACAA-AACTCTACCG 65344954 64137575 1207379 0 0.0170 0.9815 0.0185 0.0000
3 tih_rna_sample_00461_B23WHTKLT4_2 CTATAACGGA-CGTGACATTC 24228855 23830693 398162 0 0.0063 0.9836 0.0164 0.0000
3 tih_rna_sample_00479_B23WHTKLT4_2 AGATGTAAGG-CTGTACCAGG 23798856 23449749 349107 0 0.0062 0.9853 0.0147 0.0000
3 tih_rna_sample_00480_B23WHTKLT4_2 ATGCTTACTG-ACTGGTTCCG 45540413 44800093 740320 0 0.0118 0.9837 0.0163 0.0000
3 Undetermined 254304579 254304579 0 0 0.0660 1.0000 0.0000 0.0000
98 rows