Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads 4,659_c95-T1-TRNA-1_B23WHTKLT4_1,TAACTTGGTC-GTCGTGAATC,41974230,41318517,655713,0,0.0110,0.9844,0.0156,0.0000 4,659_ciJ-T1-TRNA-1_B23WHTKLT4_1,ATAAGCGGAG-CTGTTCTACG,35846906,34744936,1101970,0,0.0094,0.9693,0.0307,0.0000 4,659_bhK-T1-TRNA-1_B23WHTKLT4_1,AGTAGTGTTG-AACACCTCTT,60054240,59119302,934938,0,0.0157,0.9844,0.0156,0.0000 4,659_Lx-T1-TRNA-1_B23WHTKLT4_1,ATGTTGCCAC-TAGAAGCCAT,31166677,30623765,542912,0,0.0082,0.9826,0.0174,0.0000 4,659_bUW-T1-TRNA-1_B23WHTKLT4_1,CAGCAGGTCA-CACTTAGGTA,76685974,75726969,959005,0,0.0201,0.9875,0.0125,0.0000 4,659_d01-T1-TRNA-1_B23WHTKLT4_1,TCTAGCTGCG-ATAGGTAAGG,30926930,30406709,520221,0,0.0081,0.9832,0.0168,0.0000 4,659_bNS-T1-TRNA-1_B23WHTKLT4_1,AGATTAGCGT-CGCCTTATAT,42897926,41728824,1169102,0,0.0112,0.9727,0.0273,0.0000 4,659_buD-T1-TRNA-1_B23WHTKLT4_1,AGGTAACAAC-GCACGATGCT,27040394,26618682,421712,0,0.0071,0.9844,0.0156,0.0000 4,659_Dl-T1-TRNA-1_B23WHTKLT4_1,CGCACTTCGT-AATATGCCAG,18762793,18471723,291070,0,0.0049,0.9845,0.0155,0.0000 4,659_dES-T1-TRNA-1_B23WHTKLT4_1,CTTGCTATTC-TAGAGTCACG,40682569,39975198,707371,0,0.0106,0.9826,0.0174,0.0000 4,659_ecd-T1-TRNA-1_B23WHTKLT4_1,TCTCACCAGG-TTAACAGGTC,40744209,39875799,868410,0,0.0107,0.9787,0.0213,0.0000 4,659_cfy-T1-TRNA-1_B23WHTKLT4_1,TTCCTCACGT-ACATGAGCCA,50445502,49624644,820858,0,0.0132,0.9837,0.0163,0.0000 4,659_bGc-T1-TRNA-1_B23WHTKLT4_1,TCGAACACGA-GCGAGGTTCT,23559433,23199739,359694,0,0.0062,0.9847,0.0153,0.0000 4,659_dts-T1-TRNA-1_B23WHTKLT4_1,TCCAACTGAA-TGTCCGTAGG,26166908,25663527,503381,0,0.0068,0.9808,0.0192,0.0000 4,659_cRa-T1-TRNA-1_B23WHTKLT4_1,GAACCGCATT-CATTATGCCT,54768202,53965870,802332,0,0.0143,0.9854,0.0146,0.0000 4,659_cTi-T1-TRNA-1_B23WHTKLT4_1,ACAACAGGCT-TCCACTGTTG,46569937,45886378,683559,0,0.0122,0.9853,0.0147,0.0000 4,659_bGW-T1-TRNA-1_B23WHTKLT4_1,TTACGCGCAT-CTTAACGACA,56589760,55759092,830668,0,0.0148,0.9853,0.0147,0.0000 4,659_bQZ-T1-TRNA-1_B23WHTKLT4_1,TTCTCTTAGC-TCCTCGAGCT,33995174,33440427,554747,0,0.0089,0.9837,0.0163,0.0000 4,659_ezg-T1-TRNA-1_B23WHTKLT4_1,TCGCGACACT-CGAGTAATGT,49782427,49027696,754731,0,0.0130,0.9848,0.0152,0.0000 4,659_bTo-T1-TRNA-1_B23WHTKLT4_1,TGGAGATCGA-CAGCGGTATG,53935594,52683887,1251707,0,0.0141,0.9768,0.0232,0.0000 4,659_Mt-T1-TRNA-1_B23WHTKLT4_1,CCAGACCGAT-GCTACTTGCA,20634023,20229488,404535,0,0.0054,0.9804,0.0196,0.0000 4,659_djb-T1-TRNA-1_B23WHTKLT4_1,CCACAGCCTT-GCTATTGAAG,37075912,36431272,644640,0,0.0097,0.9826,0.0174,0.0000 4,659_gK-T1-TRNA-1_B23WHTKLT4_1,ACCGAATAGA-TCAGCATCCG,23416661,23030806,385855,0,0.0061,0.9835,0.0165,0.0000 4,659_rd-T1-TRNA-1_B23WHTKLT4_1,CGGACGATTC-TAGGTGGTGG,42890476,42320996,569480,0,0.0112,0.9867,0.0133,0.0000 4,659_epP-T1-TRNA-1_B23WHTKLT4_1,TTACTTCGTG-AAGATCGGAT,39511335,38897317,614018,0,0.0103,0.9845,0.0155,0.0000 4,659_ciZ-T1-TRNA-1_B23WHTKLT4_1,ATTCGGCTTA-TTAACGTCCG,39275509,38721879,553630,0,0.0103,0.9859,0.0141,0.0000 4,659_cAd-T1-TRNA-1_B23WHTKLT4_1,CGCGGTATCT-ATTACCGATC,39615580,39063815,551765,0,0.0104,0.9861,0.0139,0.0000 4,659_cRB-T1-TRNA-1_B23WHTKLT4_1,TATCCGCGTC-GTTGCATCGT,31312588,30782825,529763,0,0.0082,0.9831,0.0169,0.0000 4,659_dcz-T1-TRNA-1_B23WHTKLT4_1,AGGATGTCCA-ACTGGACGTT,6013544,5908726,104818,0,0.0016,0.9826,0.0174,0.0000 4,659_dc8-T1-TRNA-1_B23WHTKLT4_1,GCCAGCTATC-TTGTTCGTGT,38186553,37604565,581988,0,0.0100,0.9848,0.0152,0.0000 4,659_cWx-T1-TRNA-1_B23WHTKLT4_1,CTTACGAACT-ACGGACTGAG,36342336,35694838,647498,0,0.0095,0.9822,0.0178,0.0000 4,659_cVw-T1-TRNA-1_B23WHTKLT4_1,CAAGACTCAA-CACCGTCATA,46579038,45787138,791900,0,0.0122,0.9830,0.0170,0.0000 4,659_dm4-T1-TRNA-1_B23WHTKLT4_1,TCGACGGCAA-GTAGTTGTGT,12886785,12688137,198648,0,0.0034,0.9846,0.0154,0.0000 4,659_6i-T1-TRNA-1_B23WHTKLT4_1,TCAGTTCGAT-CTGAGTCCTT,23937786,23547224,390562,0,0.0063,0.9837,0.0163,0.0000 4,659_bCu-T1-TRNA-1_B23WHTKLT4_1,CTAACCTCAA-TCACAGTTGC,8520987,8349725,171262,0,0.0022,0.9799,0.0201,0.0000 4,659_cIX-T1-TRNA-1_B23WHTKLT4_1,GACCTACTAT-ATTGTAAGCG,37893278,37259484,633794,0,0.0099,0.9833,0.0167,0.0000 4,659_bua-T1-TRNA-1_B23WHTKLT4_1,ACGAGACGTC-CGGTCTCTCT,32937047,32382600,554447,0,0.0086,0.9832,0.0168,0.0000 4,FFPE_HD789_01_RNA_13_B23WHTKLT4_1,TATGGCAAGC-AACAGCAATG,63084153,62089231,994922,0,0.0165,0.9842,0.0158,0.0000 4,FFPE_V4_0002_RNA_0001_B23WHTKLT4_1,ACTCCGAAGC-TCCGTGTTGC,38783509,38269448,514061,0,0.0102,0.9867,0.0133,0.0000 4,NTC_0001_0001_B23WHTKLT4_1,AATCTGCAGT-TGCGAAGTGA,103217,101625,1592,0,0.0000,0.9846,0.0154,0.0000 4,tih_rna_sample_00434_B23WHTKLT4_1,AGTTCAGGCG-CACAGCTATT,52276233,51503453,772780,0,0.0137,0.9852,0.0148,0.0000 4,tih_rna_sample_00096_B23WHTKLT4_1,CGCCAAGGTA-GATAGTGTTC,40084130,39433126,651004,0,0.0105,0.9838,0.0162,0.0000 4,tih_rna_sample_00097_B23WHTKLT4_1,CCTGACATCT-TAGCTACCAG,50361883,48985294,1376589,0,0.0132,0.9727,0.0273,0.0000 4,tih_rna_sample_00087_B23WHTKLT4_1,CGAGCGTAGT-TGCTCACGCA,61241539,60400600,840939,0,0.0160,0.9863,0.0137,0.0000 4,tih_rna_sample_00434_B23WHTKLT4_2,CTGGATTACT-AAGTGTGCTA,50367250,49736886,630364,0,0.0132,0.9875,0.0125,0.0000 4,tih_rna_sample_00096_B23WHTKLT4_2,AGCAATTCAC-TCATCGTCTG,48821346,48113531,707815,0,0.0128,0.9855,0.0145,0.0000 4,tih_rna_sample_00097_B23WHTKLT4_2,ATATTCTCGG-AGATGCTCCG,42232403,41426988,805415,0,0.0111,0.9809,0.0191,0.0000 4,tih_rna_sample_00087_B23WHTKLT4_2,GACTCATCCA-GAACCAAGCG,53691641,52810563,881078,0,0.0141,0.9836,0.0164,0.0000 4,tih_rna_sample_00124_B23WHTKLT4_1,CATAAGCGAC-CCTCTTCAAG,28578031,28062642,515389,0,0.0075,0.9820,0.0180,0.0000 4,tih_rna_sample_00090_B23WHTKLT4_1,CCTAAGCTGA-CGTCGCATCT,26326724,25875298,451426,0,0.0069,0.9829,0.0171,0.0000 4,tih_rna_sample_00116_B23WHTKLT4_1,CGATGTCTTG-CCGAACGTTC,39497358,38883186,614172,0,0.0103,0.9845,0.0155,0.0000 4,tih_rna_sample_00089_B23WHTKLT4_1,GAGATGAGAG-GAATGGCGTT,22517359,21924117,593242,0,0.0059,0.9737,0.0263,0.0000 4,tih_rna_sample_00124_B23WHTKLT4_2,TCACCATAAG-AAGTTCAGGA,28317492,27864563,452929,0,0.0074,0.9840,0.0160,0.0000 4,tih_rna_sample_00090_B23WHTKLT4_2,ACTTCCGGCA-GACCAATTGT,40926903,40363351,563552,0,0.0107,0.9862,0.0138,0.0000 4,tih_rna_sample_00116_B23WHTKLT4_2,AAGCGCTTAG-TGTCTGTGAC,35365937,34636118,729819,0,0.0093,0.9794,0.0206,0.0000 4,tih_rna_sample_00089_B23WHTKLT4_2,AACAACACAG-GAACATTGGC,45115786,44402049,713737,0,0.0118,0.9842,0.0158,0.0000 4,tih_rna_sample_00121_B23WHTKLT4_1,AGACTAGATG-CGTAACACTA,37031437,36378303,653134,0,0.0097,0.9824,0.0176,0.0000 4,tih_rna_sample_00163_B23WHTKLT4_1,CCTCTATAGA-GTACTTCCAA,23228782,22794942,433840,0,0.0061,0.9813,0.0187,0.0000 4,tih_rna_sample_00136_B23WHTKLT4_1,TACGCTACTT-TTAGCGTCTT,32129580,31624351,505229,0,0.0084,0.9843,0.0157,0.0000 4,tih_rna_sample_00145_B23WHTKLT4_1,CGCACTGGTA-TTGACCGTCT,40924482,40342529,581953,0,0.0107,0.9858,0.0142,0.0000 4,tih_rna_sample_00121_B23WHTKLT4_2,AACTCTCTAC-ACGGCTTCTC,36702700,35887599,815101,0,0.0096,0.9778,0.0222,0.0000 4,tih_rna_sample_00163_B23WHTKLT4_2,GCCACCTAGT-TGCGATGTAT,40499768,39604428,895340,0,0.0106,0.9779,0.0221,0.0000 4,tih_rna_sample_00136_B23WHTKLT4_2,CTCCGCCATA-GCGTTCAGCA,33087199,32550975,536224,0,0.0087,0.9838,0.0162,0.0000 4,tih_rna_sample_00145_B23WHTKLT4_2,TGACACGATT-GCCTAGGAAG,36321128,35680226,640902,0,0.0095,0.9824,0.0176,0.0000 4,tih_rna_sample_00146_B23WHTKLT4_1,CAACTGCGCA-AGTGTATCCG,40355735,39625194,730541,0,0.0106,0.9819,0.0181,0.0000 4,tih_rna_sample_00149_B23WHTKLT4_1,GCAATCTGCT-ACGAACCAAG,28988463,28501345,487118,0,0.0076,0.9832,0.0168,0.0000 4,tih_rna_sample_00150_B23WHTKLT4_1,CTCTATTGAG-CACGCAAGTC,31226447,30368197,858250,0,0.0082,0.9725,0.0275,0.0000 4,tih_rna_sample_00158_B23WHTKLT4_1,CACTTACGGC-GCTGGAGAAG,27821417,27371362,450055,0,0.0073,0.9838,0.0162,0.0000 4,tih_rna_sample_00146_B23WHTKLT4_2,TCAGCATCTA-CCAGTGTACG,48808421,48035324,773097,0,0.0128,0.9842,0.0158,0.0000 4,tih_rna_sample_00149_B23WHTKLT4_2,GTTGCATCAA-GTTGATGCGA,31123970,30694408,429562,0,0.0081,0.9862,0.0138,0.0000 4,tih_rna_sample_00150_B23WHTKLT4_2,ATGACAGCAC-CGCTTGTTAT,49115911,48197031,918880,0,0.0129,0.9813,0.0187,0.0000 4,tih_rna_sample_00158_B23WHTKLT4_2,TAGCGACGGA-GTAACGTTCA,20117998,19717974,400024,0,0.0053,0.9801,0.0199,0.0000 4,tih_rna_sample_00161_B23WHTKLT4_1,GTATGCCACA-CCGAGTCTTC,35390923,34829115,561808,0,0.0093,0.9841,0.0159,0.0000 4,tih_rna_sample_00164_B23WHTKLT4_1,AGTATCCGAT-TATTGCGCTA,30930284,30178532,751752,0,0.0081,0.9757,0.0243,0.0000 4,tih_rna_sample_00166_B23WHTKLT4_1,AACGAAGATC-TGTGGTCTAA,38781574,38133124,648450,0,0.0102,0.9833,0.0167,0.0000 4,tih_rna_sample_00451_B23WHTKLT4_1,CCTCCTGTGA-CACGTCTACG,36047063,35148013,899050,0,0.0094,0.9751,0.0249,0.0000 4,tih_rna_sample_00161_B23WHTKLT4_2,TAGGCGAATG-AGTCCAGTGA,46877799,46192343,685456,0,0.0123,0.9854,0.0146,0.0000 4,tih_rna_sample_00164_B23WHTKLT4_2,AGTAAGGAGA-ATGCTTGGTC,16635501,16375497,260004,0,0.0044,0.9844,0.0156,0.0000 4,tih_rna_sample_00166_B23WHTKLT4_2,CCGAACAGAG-TGATACTCGC,28528415,27934608,593807,0,0.0075,0.9792,0.0208,0.0000 4,tih_rna_sample_00451_B23WHTKLT4_2,AGAACTAACG-TTATCGAGAG,21573000,21237220,335780,0,0.0056,0.9844,0.0156,0.0000 4,tih_rna_sample_00457_B23WHTKLT4_1,GAGCAGCTTG-TGCCAGTATT,50546719,49537188,1009531,0,0.0132,0.9800,0.0200,0.0000 4,tih_rna_sample_00462_B23WHTKLT4_1,CCGATAGTAG-GAGTTGCATA,53780453,52427352,1353101,0,0.0141,0.9748,0.0252,0.0000 4,tih_rna_sample_00464_B23WHTKLT4_1,GTGTCTACAG-ACACTAGCAT,34702457,34163330,539127,0,0.0091,0.9845,0.0155,0.0000 4,tih_rna_sample_00467_B23WHTKLT4_1,GTACAGACCG-GTTCTAATGG,36088511,35464784,623727,0,0.0094,0.9827,0.0173,0.0000 4,tih_rna_sample_00457_B23WHTKLT4_2,GCCAACAGAC-CGTTCACGTT,37936340,37337907,598433,0,0.0099,0.9842,0.0158,0.0000 4,tih_rna_sample_00462_B23WHTKLT4_2,CCTCGTTGGA-GACTGCGTTA,39164294,38518820,645474,0,0.0103,0.9835,0.0165,0.0000 4,tih_rna_sample_00464_B23WHTKLT4_2,AATAGGTAGG-TGGCTTATGG,24845947,24507610,338337,0,0.0065,0.9864,0.0136,0.0000 4,tih_rna_sample_00467_B23WHTKLT4_2,TATGCGTAGC-TCAGAGGCAC,38695801,38074257,621544,0,0.0101,0.9839,0.0161,0.0000 4,tih_rna_sample_00473_B23WHTKLT4_1,CCAGTCGTCA-CGCTAGGCTA,60501717,59508938,992779,0,0.0158,0.9836,0.0164,0.0000 4,tih_rna_sample_00461_B23WHTKLT4_1,AGAAGACCTA-AACCGTAACA,6488696,6343024,145672,0,0.0017,0.9775,0.0225,0.0000 4,tih_rna_sample_00479_B23WHTKLT4_1,CCGTGAGTTC-CTTGGTATGA,45804229,45143959,660270,0,0.0120,0.9856,0.0144,0.0000 4,tih_rna_sample_00480_B23WHTKLT4_1,TCAATTCCGA-TGTAGATCCG,36058181,35604052,454129,0,0.0094,0.9874,0.0126,0.0000 4,tih_rna_sample_00473_B23WHTKLT4_2,CGGAACACAA-AACTCTACCG,64192490,62996060,1196430,0,0.0168,0.9814,0.0186,0.0000 4,tih_rna_sample_00461_B23WHTKLT4_2,CTATAACGGA-CGTGACATTC,23961603,23572306,389297,0,0.0063,0.9838,0.0162,0.0000 4,tih_rna_sample_00479_B23WHTKLT4_2,AGATGTAAGG-CTGTACCAGG,23817231,23473740,343491,0,0.0062,0.9856,0.0144,0.0000 4,tih_rna_sample_00480_B23WHTKLT4_2,ATGCTTACTG-ACTGGTTCCG,44835441,44116816,718625,0,0.0117,0.9840,0.0160,0.0000 4,Undetermined,,259655929,259655929,0,0,0.0680,1.0000,0.0000,0.0000