FastQCFastQC Report
Mon 8 Jun 2026
NTC_0001_0001_B23WHTKLT4_1_2.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameNTC_0001_0001_B23WHTKLT4_1_2.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences839474
Total Bases126.7 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC98

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG78229793.1889492706147No Hit
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTTGCGAAGTGAGTGTAGA27550.32818169472788916Illumina Single End PCR Primer 1 (97% over 35bp)
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA24070.2867271648675242No Hit
GGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22410.26695287763528114No Hit
GGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21630.25766134508037175No Hit
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC20710.2467021015540684No Hit
NGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20010.23836354669709842No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)