FastQCFastQC Report
Mon 8 Jun 2026
tih_rna_sample_00461_B23WHTKLT4_1_1.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenametih_rna_sample_00461_B23WHTKLT4_1_1.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52007000
Total Bases7.8 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGAAGACCTAATCTGGG3672150.7060876420481859TruSeq Adapter, Index 2 (97% over 36bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGAAGACCTAATCTGGT777470.14949333743534524TruSeq Adapter, Index 2 (97% over 36bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGAAGACCTAATCTAGG660840.12706751014286538TruSeq Adapter, Index 2 (97% over 36bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)