#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt DNAJC3--LINC02799 239 0 239.00 0.00 DNAJC3^ENSG00000102580.15 1199 chr13:95677337:+ LINC02799^ENSG00000235887.2 19076 chr1:143500503:- INCL_NON_REF_SPLICE YES 642 0 0.37 240.00 GT 1.9656 AG 1.9899 0.8083 10000 0 TPCN2--CDH2 189 9 189.00 6.00 TPCN2^ENSG00000162341.18 6696 chr11:69063967:+ CDH2^ENSG00000170558.10 52827 chr18:27963521:- ONLY_REF_SPLICE YES 2618 34 0.08 5.69 GT 1.7968 AG 1.9899 0.6595 3453 0 TPCN2--CDH2 125 7 125.00 2.68 TPCN2^ENSG00000162341.18 5719 chr11:69062990:+ CDH2^ENSG00000170558.10 52827 chr18:27963521:- ONLY_REF_SPLICE YES 2555 34 0.05 3.80 GT 1.8062 AG 1.9899 0.4318 2505 0 TPCN2--CDH2 7 9 7.00 0.22 TPCN2^ENSG00000162341.18 7799 chr11:69067605:+ CDH2^ENSG00000170558.10 52827 chr18:27963521:- ONLY_REF_SPLICE YES 2841 34 0.01 0.49 GT 1.6895 AG 1.9899 0.0244 3583 0 TPCN2--CDH2 3 9 3.00 0.10 TPCN2^ENSG00000162341.18 7799 chr11:69067605:+ CDH2^ENSG00000170558.10 50366 chr18:27965982:- ONLY_REF_SPLICE YES 2841 3 0.00 3.25 GT 1.6895 AG 1.9219 0.0104 2344 0 TPCN2--CDH2 2 0 2.00 0.00 TPCN2^ENSG00000162341.18 4612 chr11:69057694:+ CDH2^ENSG00000170558.10 52827 chr18:27963521:- ONLY_REF_SPLICE YES 3120 34 0.00 0.09 GT 1.9086 AG 1.9899 0.0068 1480 0 TPCN2--CDH2 2 0 2.00 0.00 TPCN2^ENSG00000162341.18 1175 chr11:69049106:+ CDH2^ENSG00000170558.10 52827 chr18:27963521:- ONLY_REF_SPLICE YES 1373 34 0.00 0.09 GT 1.8892 AG 1.9899 0.0068 1278 0 TMED7--TICAM2 97 4 97.00 3.63 TMED7^ENSG00000134970.14 4947 chr5:115616318:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- INCL_NON_REF_SPLICE YES 1167 63 0.09 1.59 GT 1.9329 AG 1.6729 0.3403 331 0 TMED7--TICAM2 12 2 12.00 0.21 TMED7^ENSG00000134970.14 4947 chr5:115616318:- TICAM2^ENSG00000243414.6 13166 chr5:115581197:- INCL_NON_REF_SPLICE YES 1167 200 0.01 0.07 GT 1.9329 AG 1.9656 0.0413 213 0 TMED7--TICAM2 11 0 11.00 0.00 TMED7^ENSG00000134970.14 3819 chr5:115620435:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- ONLY_REF_SPLICE YES 1176 63 0.01 0.19 GT 1.9656 AG 1.6729 0.0372 1185 0 TMED7--TICAM2 3 4 3.00 0.11 TMED7^ENSG00000134970.14 4989 chr5:115616276:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- INCL_NON_REF_SPLICE YES 1102 63 0.01 0.12 GC 1.7465 AG 1.6729 0.0105 331 0 TMED7--TICAM2 3 2 3.00 0.05 TMED7^ENSG00000134970.14 4989 chr5:115616276:- TICAM2^ENSG00000243414.6 13166 chr5:115581197:- INCL_NON_REF_SPLICE YES 1102 200 0.01 0.03 GC 1.7465 AG 1.9656 0.0103 214 0 SHANK2--CABLES1 93 0 93.00 0.00 SHANK2^ENSG00000162105.20 6858 chr11:71147120:- CABLES1^ENSG00000134508.12 67384 chr18:23188838:+ ONLY_REF_SPLICE YES 1886 171 0.05 0.55 GT 1.8256 AG 1.8295 0.3145 1383 0 TVP23C--CDRT4 87 1 87.00 0.49 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 512 7 0.17 11.12 GT 1.8323 AG 1.9899 0.2959 2126 0 TVP23C--CDRT4 82 1 82.00 0.46 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 97 7 0.86 10.50 GT 1.9329 AG 1.9899 0.2789 1215 0 TVP23C--CDRT4 26 0 26.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 512 29 0.05 0.90 GT 1.8323 AG 1.6402 0.0879 1363 0 TVP23C--CDRT4 12 0 12.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 97 29 0.13 0.43 GT 1.9329 AG 1.6402 0.0406 137 0 TVP23C--CDRT4 10 1 10.00 0.06 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 50 7 0.24 1.50 GT 1.8892 AG 1.9899 0.034 1949 0 TVP23C--CDRT4 4 0 4.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 313 7 0.02 0.62 GT 1.9086 AG 1.9899 0.0135 1774 0 TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 50 29 0.06 0.10 GT 1.8892 AG 1.6402 0.0068 873 0 TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 313 29 0.01 0.10 GT 1.9086 AG 1.6402 0.0068 697 0 SHANK2--TPCN2 66 2 66.00 2.00 SHANK2^ENSG00000162105.20 24435 chr11:70820364:- TPCN2^ENSG00000162341.18 63120 chr11:69054033:+ ONLY_REF_SPLICE YES 1433 1144 0.05 0.06 GT 1.8256 AG 1.6895 0.23 1111 0 SHANK2--TPCN2 5 0 5.00 0.00 SHANK2^ENSG00000162105.20 4487 chr11:71224697:- TPCN2^ENSG00000162341.18 86561 chr11:69135435:+ ONLY_REF_SPLICE YES 695 124 0.01 0.05 GT 1.6729 AG 1.9086 0.0169 2197 0 SHANK2--TPCN2 5 0 5.00 0.00 SHANK2^ENSG00000162105.20 24435 chr11:70820364:- TPCN2^ENSG00000162341.18 66557 chr11:69062884:+ ONLY_REF_SPLICE YES 1433 3143 0.00 0.00 GT 1.8256 AG 1.6402 0.0169 1967 0 SHANK2--TPCN2 3 0 3.00 0.00 SHANK2^ENSG00000162105.20 24435 chr11:70820364:- TPCN2^ENSG00000162341.18 65440 chr11:69057578:+ ONLY_REF_SPLICE YES 1433 2704 0.00 0.00 GT 1.8256 AG 1.7819 0.0101 1886 0 SHANK2--TPCN2 1 0 1.00 0.00 SHANK2^ENSG00000162105.20 26719 chr11:70798443:- TPCN2^ENSG00000162341.18 86561 chr11:69135435:+ ONLY_REF_SPLICE YES 989 124 0.00 0.02 GT 1.5301 AG 1.9086 0.0034 1057 0 TLK2--FAM157A 65 0 63.71 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ FAM157A^ENSG00000236438.7 45187 chr3:198180755:+ ONLY_REF_SPLICE YES 423 290 0.16 0.23 GT 1.8892 AG 1.8892 0.2155 2733 0 TLK2P1--AC110079.1 50 0 48.29 0.00 TLK2P1^ENSG00000226049.3 1830 chr17:34039043:- AC110079.1^ENSG00000260404.3 8316 chr4:118595912:+ INCL_NON_REF_SPLICE YES 29 47 1.70 1.06 GT 1.7465 AG 1.8892 0.1633 311 0 CTTN--MYEOV 30 0 30.00 0.00 CTTN^ENSG00000085733.16 1211 chr11:70398614:+ MYEOV^ENSG00000172927.8 31725 chr11:69341510:+ ONLY_REF_SPLICE YES 1251 0 0.02 31.00 GT 1.4295 AG 1.8892 0.1015 5538 0 SS18--AC090403.1 20 3 20.00 1.55 SS18^ENSG00000141380.14 3537 chr18:26087501:- AC090403.1^ENSG00000264151.6 33711 chr18:27392867:- ONLY_REF_SPLICE YES 1364 0 0.02 24.00 GT 1.9656 AG 1.8323 0.0728 2571 0 SS18--AC090403.1 14 2 14.00 0.58 SS18^ENSG00000141380.14 3537 chr18:26087501:- AC090403.1^ENSG00000264151.6 39903 chr18:27337187:- ONLY_REF_SPLICE YES 1364 0 0.01 17.00 GT 1.9656 AG 1.7465 0.0493 2176 0 SS18--AC090403.1 9 3 9.00 0.70 SS18^ENSG00000141380.14 3537 chr18:26087501:- AC090403.1^ENSG00000264151.6 34795 chr18:27374247:- ONLY_REF_SPLICE YES 1364 0 0.01 13.00 GT 1.9656 AG 1.5329 0.0328 3538 0 SS18--AC090403.1 4 2 4.00 0.17 SS18^ENSG00000141380.14 3537 chr18:26087501:- AC090403.1^ENSG00000264151.6 38807 chr18:27338702:- ONLY_REF_SPLICE YES 1364 0 0.01 7.00 GT 1.9656 AG 1.9329 0.0141 2221 0 SS18--AC090403.1 3 0 3.00 0.00 SS18^ENSG00000141380.14 3495 chr18:26087543:- AC090403.1^ENSG00000264151.6 39955 chr18:27337135:- INCL_NON_REF_SPLICE YES 1309 0 0.00 4.00 AA 1.7232 GA 1.8892 0.0101 2124 0 AC092807.3--DDAH1 19 0 19.00 0.00 AC092807.3^ENSG00000282057.1 5553 chr1:85496166:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 11 20.00 1.67 GT 1.5628 AG 1.8062 0.0643 3011 0 AC092807.3--DDAH1 1 0 1.00 0.00 AC092807.3^ENSG00000282057.1 3294 chr1:85575832:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 1 11 1.00 0.17 GT 1.6895 AG 1.8062 0.0034 3244 0 RNGTT--BACH2 16 1 16.00 1.00 RNGTT^ENSG00000111880.16 13738 chr6:88769774:- BACH2^ENSG00000112182.15 24708 chr6:90271941:- ONLY_REF_SPLICE YES 221 1 0.08 9.00 GT 1.2729 AG 1.9086 0.0575 5109 0 RNGTT--BACH2 2 0 2.00 0.00 RNGTT^ENSG00000111880.16 13738 chr6:88769774:- BACH2^ENSG00000112182.15 25801 chr6:90252590:- ONLY_REF_SPLICE YES 221 1 0.01 1.50 GT 1.2729 AG 1.8256 0.0068 4440 0 RNGTT--BACH2 2 0 2.00 0.00 RNGTT^ENSG00000111880.16 13738 chr6:88769774:- BACH2^ENSG00000112182.15 28146 chr6:90206681:- ONLY_REF_SPLICE YES 221 1 0.01 1.50 GT 1.2729 AG 1.8062 0.0068 3751 0 CDH2--AC018697.1 13 1 13.00 0.65 CDH2^ENSG00000170558.10 24493 chr18:27963357:- AC018697.1^ENSG00000266573.6 47608 chr18:24935982:+ ONLY_REF_SPLICE YES 175 0 0.09 15.00 GT 1.9086 AG 1.8295 0.0462 873 0 CDH2--AC018697.1 4 1 4.00 0.20 CDH2^ENSG00000170558.10 24493 chr18:27963357:- AC018697.1^ENSG00000266573.6 42978 chr18:24909788:+ ONLY_REF_SPLICE YES 175 0 0.03 6.00 GT 1.9086 AG 1.8892 0.0142 355 0 CDH2--AC018697.1 3 1 3.00 0.15 CDH2^ENSG00000170558.10 24493 chr18:27963357:- AC018697.1^ENSG00000266573.6 45369 chr18:24927838:+ ONLY_REF_SPLICE YES 175 0 0.03 5.00 GT 1.9086 AG 1.5058 0.0106 1132 0 VPS33A--CLIP1 10 0 10.00 0.00 VPS33A^ENSG00000139719.11 3923 chr12:122263572:- CLIP1^ENSG00000130779.22 64446 chr12:122274162:- ONLY_REF_SPLICE YES 204 980 0.05 0.01 GT 1.9656 AG 1.6895 0.0338 312 0