File Info
- Filename
- 659_dc8-T1-TRNA-1_B23WHTKLT4_1.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0020/B23WHTKLT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/659_dc8-T1-TRNA-1_B23WHTKLT4_1.FusionInspector.fusions.abridged.tsv
- Size
- 6.5 KB
- Workflow Run
- dev_rna_exp0020-73d51683
- Published
- Jun 08, 2026 4:52 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| SND1--BRAF | 871 | 10 | 871.00 | 9.38 | SND1^ENSG00000197157.11 | 20479 | chr7:127904819:+ | BRAF^ENSG00000157764.14 | 55981 | chr7:140787584:- | ONLY_REF_SPLICE | YES | 522 | 103 | 1.69 | 8.48 | GT | 1.9329 | AG | 1.9329 | 2.9907 | 2172 | 0 |
| SND1--BRAF | 30 | 2 | 30.00 | 0.06 | SND1^ENSG00000197157.11 | 20477 | chr7:127904817:+ | BRAF^ENSG00000157764.14 | 59598 | chr7:140781677:- | INCL_NON_REF_SPLICE | YES | 541 | 368 | 0.06 | 0.09 | GG | 1.8892 | AC | 1.8295 | 0.1021 | 1441 | 0 |
| SND1--BRAF | 17 | 10 | 17.00 | 0.18 | SND1^ENSG00000197157.11 | 22748 | chr7:127929329:+ | BRAF^ENSG00000157764.14 | 44609 | chr7:140834703:- | ONLY_REF_SPLICE | YES | 503 | 217 | 0.06 | 0.13 | GT | 1.7819 | AG | 1.5656 | 0.0583 | 1285 | 0 |
| SND1--BRAF | 14 | 10 | 14.00 | 0.15 | SND1^ENSG00000197157.11 | 22748 | chr7:127929329:+ | BRAF^ENSG00000157764.14 | 54821 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 503 | 205 | 0.05 | 0.12 | GT | 1.7819 | AG | 1.7465 | 0.0481 | 2389 | 0 |
| SND1--BRAF | 14 | 0 | 14.00 | 0.00 | SND1^ENSG00000197157.11 | 16773 | chr7:127807544:+ | BRAF^ENSG00000157764.14 | 74514 | chr7:140734654:- | INCL_NON_REF_SPLICE | YES | 785 | 222 | 0.02 | 0.07 | TT | 1.9219 | TG | 1.8256 | 0.0476 | 1144 | 0 |
| SND1--BRAF | 11 | 10 | 11.00 | 0.12 | SND1^ENSG00000197157.11 | 22748 | chr7:127929329:+ | BRAF^ENSG00000157764.14 | 44627 | chr7:140834685:- | INCL_NON_REF_SPLICE | NO | 503 | 200 | 0.04 | 0.11 | GT | 1.7819 | AG | 1.8892 | 0.0378 | 1292 | 0 |
| SND1--BRAF | 8 | 10 | 8.00 | 0.09 | SND1^ENSG00000197157.11 | 22748 | chr7:127929329:+ | BRAF^ENSG00000157764.14 | 49278 | chr7:140808995:- | ONLY_REF_SPLICE | YES | 503 | 173 | 0.04 | 0.11 | GT | 1.7819 | AG | 1.9656 | 0.0275 | 2200 | 0 |
| SND1--BRAF | 1 | 10 | 1.00 | 0.01 | SND1^ENSG00000197157.11 | 24964 | chr7:127991056:+ | BRAF^ENSG00000157764.14 | 49278 | chr7:140808995:- | ONLY_REF_SPLICE | YES | 735 | 173 | 0.02 | 0.07 | GT | 1.8295 | AG | 1.9656 | 0.0034 | 1260 | 0 |
| SND1--BRAF | 1 | 10 | 1.00 | 0.01 | SND1^ENSG00000197157.11 | 27680 | chr7:128008144:+ | BRAF^ENSG00000157764.14 | 49278 | chr7:140808995:- | ONLY_REF_SPLICE | YES | 623 | 173 | 0.02 | 0.07 | GT | 1.4295 | AG | 1.9656 | 0.0034 | 1824 | 0 |
| GGA2--PET100 | 686 | 0 | 686.00 | 0.00 | GGA2^ENSG00000103365.15 | 11940 | chr16:23482923:- | PET100^ENSG00000229833.10 | 27772 | chr19:7630624:+ | INCL_NON_REF_SPLICE | YES | 185 | 237 | 3.69 | 2.89 | GT | 1.9899 | AG | 1.7968 | 2.3304 | 1180 | 0 |
| BRAF--SND1 | 461 | 3 | 461.00 | 2.88 | BRAF^ENSG00000157764.14 | 15368 | chr7:140794308:- | SND1^ENSG00000197157.11 | 71688 | chr7:127929188:+ | ONLY_REF_SPLICE | YES | 128 | 503 | 3.60 | 0.92 | GT | 1.8892 | AG | 1.6402 | 1.5758 | 2595 | 0 |
| BRAF--SND1 | 19 | 3 | 19.00 | 0.12 | BRAF^ENSG00000157764.14 | 45437 | chr7:140720971:- | SND1^ENSG00000197157.11 | 50254 | chr7:127652366:+ | INCL_NON_REF_SPLICE | NO | 0 | 763 | 23.00 | 0.03 | AG | 1.6402 | AT | 1.9219 | 0.0649 | 23 | 2 |
| BRAF--SND1 | 19 | 0 | 19.00 | 0.00 | BRAF^ENSG00000157764.14 | 15335 | chr7:140794341:- | SND1^ENSG00000197157.11 | 71762 | chr7:127929262:+ | INCL_NON_REF_SPLICE | YES | 170 | 557 | 0.12 | 0.04 | CA | 1.9656 | GT | 1.8062 | 0.0645 | 2532 | 0 |
| BRAF--SND1 | 1 | 3 | 1.00 | 0.01 | BRAF^ENSG00000157764.14 | 15368 | chr7:140794308:- | SND1^ENSG00000197157.11 | 70561 | chr7:127928060:+ | ONLY_REF_SPLICE | YES | 128 | 452 | 0.04 | 0.01 | GT | 1.8892 | AG | 1.8892 | 0.0034 | 3273 | 0 |
| PRKDC--UCN3 | 231 | 4 | 231.00 | 3.90 | PRKDC^ENSG00000253729.8 | 30128 | chr8:47893139:- | UCN3^ENSG00000178473.7 | 90003 | chr10:5373715:+ | ONLY_REF_SPLICE | YES | 262 | 2 | 0.90 | 78.67 | GT | 1.8892 | AG | 1.7465 | 0.7979 | 76 | 1 |
| PRKDC--UCN3 | 8 | 3 | 8.00 | 0.10 | PRKDC^ENSG00000253729.8 | 30132 | chr8:47893135:- | UCN3^ENSG00000178473.7 | 90009 | chr10:5373721:+ | INCL_NON_REF_SPLICE | NO | 247 | 2 | 0.05 | 4.00 | GT | 1.9656 | AG | 1.9329 | 0.0275 | 76 | 1 |
| TLK2--AC240565.1 | 69 | 3 | 63.10 | 3.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 122 | 14 | 0.59 | 4.87 | GT | 1.8892 | AG | 1.8892 | 0.2246 | 1734 | 0 |
| TLK2P1--AC110079.1 | 62 | 0 | 54.90 | 0.00 | TLK2P1^ENSG00000226049.3 | 1830 | chr17:34039043:- | AC110079.1^ENSG00000260404.3 | 8316 | chr4:118595912:+ | INCL_NON_REF_SPLICE | YES | 15 | 39 | 3.94 | 1.57 | GT | 1.7465 | AG | 1.8892 | 0.1865 | 311 | 0 |
| CAST--LIX1-AS1 | 51 | 2 | 51.00 | 1.91 | CAST^ENSG00000153113.24 | 41746 | chr5:96767999:+ | LIX1-AS1^ENSG00000251513.2 | 54881 | chr5:97101759:+ | ONLY_REF_SPLICE | YES | 331 | 0 | 0.16 | 54.00 | GT | 1.4566 | AG | 1.7968 | 0.1797 | 2603 | 0 |
| CAST--LIX1-AS1 | 3 | 1 | 3.00 | 0.05 | CAST^ENSG00000153113.24 | 41746 | chr5:96767999:+ | LIX1-AS1^ENSG00000251513.2 | 58879 | chr5:97431744:+ | ONLY_REF_SPLICE | YES | 331 | 2 | 0.02 | 1.67 | GT | 1.4566 | AG | 1.5850 | 0.0104 | 1119 | 0 |
| CAST--LIX1-AS1 | 2 | 1 | 2.00 | 0.04 | CAST^ENSG00000153113.24 | 41746 | chr5:96767999:+ | LIX1-AS1^ENSG00000251513.2 | 57217 | chr5:97183008:+ | ONLY_REF_SPLICE | YES | 331 | 17 | 0.01 | 0.22 | GT | 1.4566 | AG | 1.6402 | 0.0069 | 832 | 0 |
| CRYZL2P--SEC16B | 40 | 2 | 40.00 | 1.90 | CRYZL2P^ENSG00000242193.11 | 8825 | chr1:178026155:- | SEC16B^ENSG00000120341.18 | 19663 | chr1:177968039:- | ONLY_REF_SPLICE | YES | 1 | 11 | 21.50 | 3.58 | GT | 1.9086 | AG | 1.5546 | 0.1424 | 2589 | 0 |
| CRYZL2P--SEC16B | 1 | 2 | 1.00 | 0.05 | CRYZL2P^ENSG00000242193.11 | 9991 | chr1:178024404:- | SEC16B^ENSG00000120341.18 | 19663 | chr1:177968039:- | ONLY_REF_SPLICE | YES | 3 | 11 | 1.00 | 0.33 | GT | 1.6895 | AG | 1.5546 | 0.0036 | 2356 | 0 |
| CRYZL2P--SEC16B | 1 | 2 | 1.00 | 0.05 | CRYZL2P^ENSG00000242193.11 | 11220 | chr1:178022440:- | SEC16B^ENSG00000120341.18 | 19663 | chr1:177968039:- | ONLY_REF_SPLICE | NO | 1 | 11 | 2.00 | 0.33 | GT | 1.9656 | AG | 1.5546 | 0.0036 | 2635 | 0 |
| TVP23C--CDRT4 | 36 | 1 | 36.00 | 0.84 | TVP23C^ENSG00000175106.17 | 14926 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | INCL_NON_REF_SPLICE | YES | 21 | 2 | 1.73 | 12.67 | GT | 1.9329 | AG | 1.9899 | 0.1252 | 1215 | 0 |
| TVP23C--CDRT4 | 29 | 0 | 29.00 | 0.00 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 86 | 2 | 0.34 | 10.00 | GT | 1.8323 | AG | 1.9899 | 0.0985 | 2126 | 0 |
| TVP23C--CDRT4 | 7 | 1 | 7.00 | 0.16 | TVP23C^ENSG00000175106.17 | 14926 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | INCL_NON_REF_SPLICE | YES | 21 | 5 | 0.41 | 1.50 | GT | 1.9329 | AG | 1.6402 | 0.0243 | 137 | 0 |
| TVP23C--CDRT4 | 6 | 0 | 6.00 | 0.00 | TVP23C^ENSG00000175106.17 | 6853 | chr17:15545785:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | ONLY_REF_SPLICE | YES | 59 | 5 | 0.12 | 1.17 | GT | 1.9086 | AG | 1.6402 | 0.0204 | 697 | 0 |
| TVP23C--CDRT4 | 6 | 0 | 6.00 | 0.00 | TVP23C^ENSG00000175106.17 | 6853 | chr17:15545785:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 59 | 2 | 0.12 | 2.33 | GT | 1.9086 | AG | 1.9899 | 0.0204 | 1774 | 0 |
| TVP23C--CDRT4 | 2 | 0 | 2.00 | 0.00 | TVP23C^ENSG00000175106.17 | 12676 | chr17:15516419:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 3 | 2 | 0.75 | 1.00 | GT | 1.8892 | AG | 1.9899 | 0.0068 | 1949 | 0 |
| SMG6--AC006435.2 | 17 | 0 | 17.00 | 0.00 | SMG6^ENSG00000070366.14 | 22176 | chr17:2172658:- | AC006435.2^ENSG00000263345.1 | 41596 | chr17:2376852:- | ONLY_REF_SPLICE | YES | 96 | 26 | 0.19 | 0.67 | GT | 1.8295 | AG | 1.9219 | 0.0577 | 808 | 0 |
| SMG6--AC006435.2 | 5 | 0 | 5.00 | 0.00 | SMG6^ENSG00000070366.14 | 22176 | chr17:2172658:- | AC006435.2^ENSG00000263345.1 | 42756 | chr17:2375692:- | ONLY_REF_SPLICE | YES | 96 | 1044 | 0.06 | 0.01 | GT | 1.8295 | AG | 1.9329 | 0.017 | 1069 | 0 |
33 rows