File Info
- Filename
- FFPE_V4_0002_RNA_0001_B23WHTKLT4_1.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0020/B23WHTKLT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/FFPE_V4_0002_RNA_0001_B23WHTKLT4_1.FusionInspector.fusions.abridged.tsv
- Size
- 7.1 KB
- Workflow Run
- dev_rna_exp0020-73d51683
- Published
- Jun 08, 2026 4:55 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| TMPRSS2--ERG | 2941 | 0 | 2941.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 4 | 91 | 588.40 | 31.98 | GT | 1.6895 | AG | 1.9219 | 9.9386 | 1104 | 0 |
| TMPRSS2--ERG | 7 | 0 | 7.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4654 | chr21:41508079:- | ERG^ENSG00000157554.19 | 28755 | chr21:38584941:- | INCL_NON_REF_SPLICE | YES | 0 | 94 | 8.00 | 0.08 | GA | 1.7232 | TA | 1.8892 | 0.0237 | 1108 | 0 |
| TMPRSS2--ERG | 7 | 0 | 7.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4639 | chr21:41508094:- | ERG^ENSG00000157554.19 | 36583 | chr21:38445577:- | INCL_NON_REF_SPLICE | YES | 16 | 1084 | 0.47 | 0.01 | TG | 1.2729 | TG | 1.8892 | 0.0237 | 339 | 0 |
| FGFR3--TACC3 | 2765 | 3 | 2765.00 | 2.99 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 59 | 3135 | 46.15 | 0.88 | GT | 1.8892 | AG | 1.7819 | 9.3539 | 627 | 0 |
| FGFR3--TACC3 | 8 | 3 | 8.00 | 0.01 | FGFR3^ENSG00000068078.20 | 9863 | chr4:1806919:+ | TACC3^ENSG00000013810.20 | 27587 | chr4:1739699:+ | INCL_NON_REF_SPLICE | NO | 208 | 3058 | 0.06 | 0.00 | GT | 1.8892 | AG | 1.7819 | 0.027 | 637 | 0 |
| TPM3--NTRK1 | 720 | 4 | 720.00 | 4.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 9171 | 20 | 0.08 | 34.52 | GT | 1.9329 | AG | 1.6895 | 2.4466 | 355 | 0 |
| LMNA--NTRK1 | 656 | 5 | 656.00 | 5.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 2936 | 178 | 0.23 | 3.70 | GT | 1.7465 | AG | 1.5058 | 2.2337 | 947 | 0 |
| ETV6--NTRK3 | 592 | 5 | 592.00 | 5.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 2590 | 12 | 0.23 | 46.00 | GT | 1.7819 | AG | 1.9656 | 2.0175 | 1252 | 0 |
| FGFR3--BAIAP2L1 | 418 | 2 | 418.00 | 2.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 58 | 41 | 7.14 | 10.02 | GT | 1.8892 | AG | 1.8062 | 1.4194 | 1171 | 0 |
| NCOA4--RET | 410 | 4 | 410.00 | 4.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 2120 | 191 | 0.20 | 2.16 | GT | 1.9086 | AG | 1.8323 | 1.399 | 5144 | 0 |
| CCDC6--RET | 383 | 3 | 383.00 | 3.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 2037 | 191 | 0.19 | 2.02 | GT | 1.8892 | AG | 1.8323 | 1.3044 | 2092 | 0 |
| KIF5B--RET | 335 | 5 | 335.00 | 4.91 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 1435 | 9 | 0.24 | 34.10 | GT | 1.9656 | AG | 1.9656 | 1.1487 | 3178 | 0 |
| KIF5B--RET | 6 | 5 | 6.00 | 0.09 | KIF5B^ENSG00000170759.11 | 19975 | chr10:32017145:- | RET^ENSG00000165731.20 | 38831 | chr10:43114479:+ | INCL_NON_REF_SPLICE | NO | 1488 | 1 | 0.01 | 6.00 | TG | 1.9899 | CA | 1.9656 | 0.0206 | 3181 | 0 |
| EML4--ALK | 305 | 0 | 305.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 644 | 25 | 0.47 | 11.77 | GT | 1.6895 | AG | 1.9086 | 1.0307 | 1550 | 0 |
| SLC45A3--BRAF | 271 | 0 | 271.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 1 | 1457 | 136.00 | 0.19 | GT | 1.5628 | AG | 1.7465 | 0.9158 | 2599 | 0 |
| EGFR--SEPTIN14 | 261 | 0 | 261.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 5 | 37 | 43.67 | 6.89 | GT | 1.8892 | AG | 1.9899 | 0.882 | 658 | 0 |
| CD74--ROS1 | 240 | 3 | 240.00 | 2.91 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 31880 | 11 | 0.01 | 20.33 | GT | 1.7819 | AG | 1.7465 | 0.8208 | 2407 | 0 |
| CD74--ROS1 | 7 | 3 | 7.00 | 0.09 | CD74^ENSG00000019582.16 | 4992 | chr5:150404678:- | ROS1^ENSG00000047936.11 | 48732 | chr6:117324414:- | INCL_NON_REF_SPLICE | YES | 31885 | 14 | 0.00 | 0.73 | AC | 1.9329 | GA | 1.8295 | 0.024 | 2408 | 0 |
| PAX8--PPARG | 224 | 0 | 224.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 66 | 11 | 3.36 | 18.75 | GT | 1.8295 | AG | 1.9329 | 0.757 | 1923 | 0 |
| STX16--NPEPL1 | 209 | 9 | 209.00 | 8.97 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 1329 | 204 | 0.16 | 1.07 | GT | 1.7968 | AG | 1.8256 | 0.7366 | 1940 | 0 |
| STX16--NPEPL1 | 6 | 1 | 6.00 | 0.03 | STX16^ENSG00000124222.22 | 7774 | chr20:58671297:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 1515 | 204 | 0.01 | 0.04 | GT | 1.8062 | AG | 1.8256 | 0.0204 | 2729 | 0 |
| STX16--NPEPL1 | 2 | 0 | 2.00 | 0.00 | STX16^ENSG00000124222.22 | 7080 | chr20:58670603:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 2038 | 204 | 0.00 | 0.01 | GT | 1.9086 | AG | 1.8256 | 0.0068 | 2386 | 0 |
| SLC34A2--ROS1 | 198 | 5 | 198.00 | 4.99 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 11 | 204.00 | 17.00 | GT | 1.8892 | AG | 1.7465 | 0.686 | 999 | 0 |
| SLC34A2--ROS1 | 3 | 1 | 3.00 | 0.01 | SLC34A2^ENSG00000157765.13 | 6088 | chr4:25664334:+ | ROS1^ENSG00000047936.11 | 58030 | chr6:117324410:- | INCL_NON_REF_SPLICE | YES | 0 | 26 | 5.00 | 0.19 | GA | 1.7465 | AT | 1.9086 | 0.0101 | 1004 | 0 |
| TFG--NTRK1 | 186 | 2 | 186.00 | 2.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 1401 | 20 | 0.13 | 9.00 | GT | 1.9329 | AG | 1.6895 | 0.6354 | 883 | 0 |
| FBXO25--AC240565.1 | 111 | 0 | 111.00 | 0.00 | FBXO25^ENSG00000147364.17 | 7247 | chr8:435707:+ | AC240565.1^ENSG00000280136.2 | 27298 | chr17:106864:- | ONLY_REF_SPLICE | YES | 163 | 33 | 0.68 | 3.29 | GT | 1.7819 | AG | 1.8892 | 0.3751 | 7162 | 0 |
| FBXO25--AC240565.1 | 1 | 0 | 1.00 | 0.00 | FBXO25^ENSG00000147364.17 | 4937 | chr8:431444:+ | AC240565.1^ENSG00000280136.2 | 27298 | chr17:106864:- | ONLY_REF_SPLICE | YES | 137 | 33 | 0.01 | 0.06 | GT | 1.3383 | AG | 1.8892 | 0.0034 | 5533 | 0 |
| TLK2--AC240565.1 | 76 | 0 | 71.16 | 0.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 694 | 33 | 0.11 | 2.26 | GT | 1.8892 | AG | 1.8892 | 0.2405 | 1734 | 0 |
| TVP23C--CDRT4 | 64 | 2 | 64.00 | 1.49 | TVP23C^ENSG00000175106.17 | 14926 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | INCL_NON_REF_SPLICE | YES | 179 | 10 | 0.37 | 6.09 | GT | 1.9329 | AG | 1.9899 | 0.2213 | 1215 | 0 |
| TVP23C--CDRT4 | 39 | 1 | 39.00 | 0.29 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 491 | 10 | 0.08 | 3.73 | GT | 1.8323 | AG | 1.9899 | 0.1328 | 2126 | 0 |
| TVP23C--CDRT4 | 30 | 1 | 30.00 | 0.22 | TVP23C^ENSG00000175106.17 | 12676 | chr17:15516419:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 24 | 10 | 1.28 | 2.91 | GT | 1.8892 | AG | 1.9899 | 0.1021 | 1949 | 0 |
| TVP23C--CDRT4 | 13 | 0 | 13.00 | 0.00 | TVP23C^ENSG00000175106.17 | 14926 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | INCL_NON_REF_SPLICE | YES | 179 | 47 | 0.08 | 0.29 | GT | 1.9329 | AG | 1.6402 | 0.0439 | 137 | 0 |
| TVP23C--CDRT4 | 10 | 0 | 10.00 | 0.00 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | ONLY_REF_SPLICE | YES | 491 | 47 | 0.02 | 0.23 | GT | 1.8323 | AG | 1.6402 | 0.0338 | 1363 | 0 |
| TLK2P1--AC110079.1 | 62 | 0 | 55.84 | 0.00 | TLK2P1^ENSG00000226049.3 | 1830 | chr17:34039043:- | AC110079.1^ENSG00000260404.3 | 8316 | chr4:118595912:+ | INCL_NON_REF_SPLICE | YES | 58 | 161 | 1.07 | 0.39 | GT | 1.7465 | AG | 1.8892 | 0.1887 | 311 | 0 |
| SOGA3--KIAA0408 | 19 | 1 | 19.00 | 1.00 | SOGA3^ENSG00000214338.10 | 11088 | chr6:127473080:- | KIAA0408^ENSG00000189367.15 | 15731 | chr6:127454101:- | INCL_NON_REF_SPLICE | YES | 0 | 6 | 21.00 | 3.00 | GT | 1.6895 | AG | 1.7465 | 0.0676 | 176 | 0 |
36 rows