#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
TMPRSS2--ERG	2941	0	2941.00	0.00	TMPRSS2^ENSG00000184012.14	4652	chr21:41508081:-	ERG^ENSG00000157554.19	28751	chr21:38584945:-	ONLY_REF_SPLICE	YES	4	91	588.40	31.98	GT	1.6895	AG	1.9219	9.9386	1104	0
TMPRSS2--ERG	7	0	7.00	0.00	TMPRSS2^ENSG00000184012.14	4654	chr21:41508079:-	ERG^ENSG00000157554.19	28755	chr21:38584941:-	INCL_NON_REF_SPLICE	YES	0	94	8.00	0.08	GA	1.7232	TA	1.8892	0.0237	1108	0
TMPRSS2--ERG	7	0	7.00	0.00	TMPRSS2^ENSG00000184012.14	4639	chr21:41508094:-	ERG^ENSG00000157554.19	36583	chr21:38445577:-	INCL_NON_REF_SPLICE	YES	16	1084	0.47	0.01	TG	1.2729	TG	1.8892	0.0237	339	0
FGFR3--TACC3	2765	3	2765.00	2.99	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27590	chr4:1739702:+	ONLY_REF_SPLICE	YES	59	3135	46.15	0.88	GT	1.8892	AG	1.7819	9.3539	627	0
FGFR3--TACC3	8	3	8.00	0.01	FGFR3^ENSG00000068078.20	9863	chr4:1806919:+	TACC3^ENSG00000013810.20	27587	chr4:1739699:+	INCL_NON_REF_SPLICE	NO	208	3058	0.06	0.00	GT	1.8892	AG	1.7819	0.027	637	0
TPM3--NTRK1	720	4	720.00	4.00	TPM3^ENSG00000143549.21	13389	chr1:154170400:-	NTRK1^ENSG00000198400.13	42070	chr1:156874571:+	ONLY_REF_SPLICE	YES	9171	20	0.08	34.52	GT	1.9329	AG	1.6895	2.4466	355	0
LMNA--NTRK1	656	5	656.00	5.00	LMNA^ENSG00000160789.23	17733	chr1:156130773:+	NTRK1^ENSG00000198400.13	40289	chr1:156874906:+	ONLY_REF_SPLICE	YES	2936	178	0.23	3.70	GT	1.7465	AG	1.5058	2.2337	947	0
ETV6--NTRK3	592	5	592.00	5.00	ETV6^ENSG00000139083.11	11237	chr12:11869969:+	NTRK3^ENSG00000140538.16	46238	chr15:87940753:-	ONLY_REF_SPLICE	YES	2590	12	0.23	46.00	GT	1.7819	AG	1.9656	2.0175	1252	0
FGFR3--BAIAP2L1	418	2	418.00	2.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	BAIAP2L1^ENSG00000006453.14	16927	chr7:98362432:-	ONLY_REF_SPLICE	YES	58	41	7.14	10.02	GT	1.8892	AG	1.8062	1.4194	1171	0
NCOA4--RET	410	4	410.00	4.00	NCOA4^ENSG00000266412.6	9075	chr10:46012883:-	RET^ENSG00000165731.20	30127	chr10:43116584:+	ONLY_REF_SPLICE	YES	2120	191	0.20	2.16	GT	1.9086	AG	1.8323	1.399	5144	0
CCDC6--RET	383	3	383.00	3.00	CCDC6^ENSG00000108091.11	1435	chr10:59906122:-	RET^ENSG00000165731.20	31587	chr10:43116584:+	ONLY_REF_SPLICE	YES	2037	191	0.19	2.02	GT	1.8892	AG	1.8323	1.3044	2092	0
KIF5B--RET	335	5	335.00	4.91	KIF5B^ENSG00000170759.11	19977	chr10:32017143:-	RET^ENSG00000165731.20	38832	chr10:43114480:+	ONLY_REF_SPLICE	YES	1435	9	0.24	34.10	GT	1.9656	AG	1.9656	1.1487	3178	0
KIF5B--RET	6	5	6.00	0.09	KIF5B^ENSG00000170759.11	19975	chr10:32017145:-	RET^ENSG00000165731.20	38831	chr10:43114479:+	INCL_NON_REF_SPLICE	NO	1488	1	0.01	6.00	TG	1.9899	CA	1.9656	0.0206	3181	0
EML4--ALK	305	0	305.00	0.00	EML4^ENSG00000143924.19	17400	chr2:42295516:+	ALK^ENSG00000171094.18	59003	chr2:29223528:-	ONLY_REF_SPLICE	YES	644	25	0.47	11.77	GT	1.6895	AG	1.9086	1.0307	1550	0
SLC45A3--BRAF	271	0	271.00	0.00	SLC45A3^ENSG00000158715.6	1116	chr1:205680394:-	BRAF^ENSG00000157764.14	25172	chr7:140794467:-	ONLY_REF_SPLICE	YES	1	1457	136.00	0.19	GT	1.5628	AG	1.7465	0.9158	2599	0
EGFR--SEPTIN14	261	0	261.00	0.00	EGFR^ENSG00000146648.19	30734	chr7:55200413:+	SEPTIN14^ENSG00000154997.9	54769	chr7:55796092:-	ONLY_REF_SPLICE	YES	5	37	43.67	6.89	GT	1.8892	AG	1.9899	0.882	658	0
CD74--ROS1	240	3	240.00	2.91	CD74^ENSG00000019582.16	4990	chr5:150404680:-	ROS1^ENSG00000047936.11	48731	chr6:117324415:-	ONLY_REF_SPLICE	YES	31880	11	0.01	20.33	GT	1.7819	AG	1.7465	0.8208	2407	0
CD74--ROS1	7	3	7.00	0.09	CD74^ENSG00000019582.16	4992	chr5:150404678:-	ROS1^ENSG00000047936.11	48732	chr6:117324414:-	INCL_NON_REF_SPLICE	YES	31885	14	0.00	0.73	AC	1.9329	GA	1.8295	0.024	2408	0
PAX8--PPARG	224	0	224.00	0.00	PAX8^ENSG00000125618.18	9714	chr2:113235394:-	PPARG^ENSG00000132170.23	31404	chr3:12379704:+	ONLY_REF_SPLICE	YES	66	11	3.36	18.75	GT	1.8295	AG	1.9329	0.757	1923	0
STX16--NPEPL1	209	9	209.00	8.97	STX16^ENSG00000124222.22	8855	chr20:58673711:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	1329	204	0.16	1.07	GT	1.7968	AG	1.8256	0.7366	1940	0
STX16--NPEPL1	6	1	6.00	0.03	STX16^ENSG00000124222.22	7774	chr20:58671297:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	1515	204	0.01	0.04	GT	1.8062	AG	1.8256	0.0204	2729	0
STX16--NPEPL1	2	0	2.00	0.00	STX16^ENSG00000124222.22	7080	chr20:58670603:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	2038	204	0.00	0.01	GT	1.9086	AG	1.8256	0.0068	2386	0
SLC34A2--ROS1	198	5	198.00	4.99	SLC34A2^ENSG00000157765.13	6084	chr4:25664330:+	ROS1^ENSG00000047936.11	58025	chr6:117324415:-	ONLY_REF_SPLICE	YES	0	11	204.00	17.00	GT	1.8892	AG	1.7465	0.686	999	0
SLC34A2--ROS1	3	1	3.00	0.01	SLC34A2^ENSG00000157765.13	6088	chr4:25664334:+	ROS1^ENSG00000047936.11	58030	chr6:117324410:-	INCL_NON_REF_SPLICE	YES	0	26	5.00	0.19	GA	1.7465	AT	1.9086	0.0101	1004	0
TFG--NTRK1	186	2	186.00	2.00	TFG^ENSG00000114354.15	9135	chr3:100732672:+	NTRK1^ENSG00000198400.13	37655	chr1:156874571:+	ONLY_REF_SPLICE	YES	1401	20	0.13	9.00	GT	1.9329	AG	1.6895	0.6354	883	0
FBXO25--AC240565.1	111	0	111.00	0.00	FBXO25^ENSG00000147364.17	7247	chr8:435707:+	AC240565.1^ENSG00000280136.2	27298	chr17:106864:-	ONLY_REF_SPLICE	YES	163	33	0.68	3.29	GT	1.7819	AG	1.8892	0.3751	7162	0
FBXO25--AC240565.1	1	0	1.00	0.00	FBXO25^ENSG00000147364.17	4937	chr8:431444:+	AC240565.1^ENSG00000280136.2	27298	chr17:106864:-	ONLY_REF_SPLICE	YES	137	33	0.01	0.06	GT	1.3383	AG	1.8892	0.0034	5533	0
TLK2--AC240565.1	76	0	71.16	0.00	TLK2^ENSG00000146872.18	17137	chr17:62560126:+	AC240565.1^ENSG00000280136.2	41242	chr17:106864:-	ONLY_REF_SPLICE	YES	694	33	0.11	2.26	GT	1.8892	AG	1.8892	0.2405	1734	0
TVP23C--CDRT4	64	2	64.00	1.49	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	INCL_NON_REF_SPLICE	YES	179	10	0.37	6.09	GT	1.9329	AG	1.9899	0.2213	1215	0
TVP23C--CDRT4	39	1	39.00	0.29	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	491	10	0.08	3.73	GT	1.8323	AG	1.9899	0.1328	2126	0
TVP23C--CDRT4	30	1	30.00	0.22	TVP23C^ENSG00000175106.17	12676	chr17:15516419:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	24	10	1.28	2.91	GT	1.8892	AG	1.9899	0.1021	1949	0
TVP23C--CDRT4	13	0	13.00	0.00	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	INCL_NON_REF_SPLICE	YES	179	47	0.08	0.29	GT	1.9329	AG	1.6402	0.0439	137	0
TVP23C--CDRT4	10	0	10.00	0.00	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	ONLY_REF_SPLICE	YES	491	47	0.02	0.23	GT	1.8323	AG	1.6402	0.0338	1363	0
TLK2P1--AC110079.1	62	0	55.84	0.00	TLK2P1^ENSG00000226049.3	1830	chr17:34039043:-	AC110079.1^ENSG00000260404.3	8316	chr4:118595912:+	INCL_NON_REF_SPLICE	YES	58	161	1.07	0.39	GT	1.7465	AG	1.8892	0.1887	311	0
SOGA3--KIAA0408	19	1	19.00	1.00	SOGA3^ENSG00000214338.10	11088	chr6:127473080:-	KIAA0408^ENSG00000189367.15	15731	chr6:127454101:-	INCL_NON_REF_SPLICE	YES	0	6	21.00	3.00	GT	1.6895	AG	1.7465	0.0676	176	0