Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/47/f098b457f181564e2a469367acdc4a/659_ciZ-T1-TRNA-1_B23WHTKLT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/90/95ec88a9ce11301a20d4ffcb5030a5/659_ciZ-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/34/fe9a4370ea8a61c8068ee319ab9fbb/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/34/fe9a4370ea8a61c8068ee319ab9fbb/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/47/f098b457f181564e2a469367acdc4a/659_ciZ-T1-TRNA-1_B23WHTKLT4_1_2.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.ziEJaDfRag/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.ziEJaDfRag/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary
-sample contains 295476694 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.ziEJaDfRag/ctat_genome_lib_build_dir  -J /tmp/nxf.ziEJaDfRag/659_ciZ-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction  -O /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.ziEJaDfRag/659_ciZ-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.ziEJaDfRag/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2600000], rate=51468.16/min -building interval tree based on /tmp/nxf.ziEJaDfRag/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[2590000], rate=47508.41/min 
[2600000], rate=47589.99/min -building interval tree based on /tmp/nxf.ziEJaDfRag/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=25000.00/min 
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[2590000], rate=40606.22/min 
[2600000], rate=40614.42/min -building interval tree based on /tmp/nxf.ziEJaDfRag/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=100000.00/min 
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[2600000], rate=31350.48/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.ziEJaDfRag/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
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 4705882.35 reads per min processed...  
 4641509.43 reads per min processed...  
 4666666.67 reads per min processed...  
 4690909.09 reads per min processed...  
 4714285.71 reads per min processed...  
 4655172.41 reads per min processed...  
 4677966.10 reads per min processed...  
 4700000.00 reads per min processed...  
 4645161.29 reads per min processed...  
 4666666.67 reads per min processed...  
 4687500.00 reads per min processed...  
 4707692.31 reads per min processed...  
 4656716.42 reads per min processed...  
 4676470.59 reads per min processed...  
 4695652.17 reads per min processed...  
 4714285.71 reads per min processed...  
 4732394.37 reads per min processed...  
 4750000.00 reads per min processed...  
 4833333.33 reads per min processed...  
 4849315.07 reads per min processed...  
 4864864.86 reads per min processed...  
 4880000.00 reads per min processed...  
 4831168.83 reads per min processed...  
 4846153.85 reads per min processed...  
 4860759.49 reads per min processed...  
 4875000.00 reads per min processed...  
 4829268.29 reads per min processed...  
 4843373.49 reads per min processed...  
 4857142.86 reads per min processed...  
 4870588.24 reads per min processed...  
 4883720.93 reads per min processed...  
 4840909.09 reads per min processed...  
 4853932.58 reads per min processed...  
 4866666.67 reads per min processed...  
 4826086.96 reads per min processed...  
 4838709.68 reads per min processed...  
 4851063.83 reads per min processed...  
 4863157.89 reads per min processed...  
 4875000.00 reads per min processed...  
 4836734.69 reads per min processed...  
 4848484.85 reads per min processed...  
 4860000.00 reads per min processed...  
 4871287.13 reads per min processed...  
 4834951.46 reads per min processed...  
 4846153.85 reads per min processed...  
 4857142.86 reads per min processed...  
 4867924.53 reads per min processed...  
 4833333.33 reads per min processed...  
 4844036.70 reads per min processed...  
 4854545.45 reads per min processed...  
 4864864.86 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.ziEJaDfRag/659_ciZ-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.ziEJaDfRag/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -307079.210897
EM: Round [1] log likelihood: -306903.172047
EM: Round [2] log likelihood: -306837.618835
EM: Round [3] log likelihood: -306806.531098
EM: Round [4] log likelihood: -306790.182403
EM: Round [5] log likelihood: -306781.047543
EM: Round [6] log likelihood: -306775.676161
EM: Round [7] log likelihood: -306772.350651
EM: Round [8] log likelihood: -306770.182135
EM: Round [9] log likelihood: -306768.696957
EM: Round [10] log likelihood: -306767.634364
EM: Round [11] log likelihood: -306766.845277
EM: Round [12] log likelihood: -306766.240905
EM: Round [13] log likelihood: -306765.766130
EM: Round [14] log likelihood: -306765.385346
EM: Round [15] log likelihood: -306765.074692
EM: Round [16] log likelihood: -306764.817636
EM: Round [17] log likelihood: -306764.602383
EM: Round [18] log likelihood: -306764.420305
EM: Round [19] log likelihood: -306764.264943
EM: Round [20] log likelihood: -306764.131375
EM: Round [21] log likelihood: -306764.015781
EM: Round [22] log likelihood: -306763.915156
EM: Round [23] log likelihood: -306763.827104
EM: Round [24] log likelihood: -306763.749694
EM: Round [25] log likelihood: -306763.681352
EM: Round [26] log likelihood: -306763.620785
EM: Round [27] log likelihood: -306763.566918
EM: Round [28] log likelihood: -306763.518858
EM: Round [29] log likelihood: -306763.475850
EM: Round [30] log likelihood: -306763.437257
EM: Round [31] log likelihood: -306763.402538
EM: Round [32] log likelihood: -306763.371228
EM: Round [33] log likelihood: -306763.342929
EM: Round [34] log likelihood: -306763.317297
EM: Round [35] log likelihood: -306763.294035
EM: Round [36] log likelihood: -306763.272883
EM: Round [37] log likelihood: -306763.253617
EM: Round [38] log likelihood: -306763.236037
EM: Round [39] log likelihood: -306763.219970
EM: Round [40] log likelihood: -306763.205263
EM: Round [41] log likelihood: -306763.191781
EM: Round [42] log likelihood: -306763.179405
EM: Round [43] log likelihood: -306763.168029
EM: Round [44] log likelihood: -306763.157557
EM: Round [45] log likelihood: -306763.147907
EM: Round [46] log likelihood: -306763.139002
EM: Round [47] log likelihood: -306763.130777
EM: Round [48] log likelihood: -306763.123170
EM: Round [49] log likelihood: -306763.116127
EM: Round [50] log likelihood: -306763.109600
EM: Round [51] log likelihood: -306763.103546
EM: Round [52] log likelihood: -306763.097924
EM: Round [53] log likelihood: -306763.092698
EM: Round [54] log likelihood: -306763.087837
EM: Round [55] log likelihood: -306763.083311
EM: Round [56] log likelihood: -306763.079093
EM: Round [57] log likelihood: -306763.075159
EM: Round [58] log likelihood: -306763.071487
EM: Round [59] log likelihood: -306763.068057
EM: Round [60] log likelihood: -306763.064850
EM: Round [61] log likelihood: -306763.061851
EM: Round [62] log likelihood: -306763.059043
EM: Round [63] log likelihood: -306763.056412
EM: Round [64] log likelihood: -306763.053946
EM: Round [65] log likelihood: -306763.051634
EM: Round [66] log likelihood: -306763.049463
EM: Round [67] log likelihood: -306763.047424
EM: Round [68] log likelihood: -306763.045508
EM: Round [69] log likelihood: -306763.043707
EM: Round [70] log likelihood: -306763.042012
EM: Round [71] log likelihood: -306763.040417
EM: Round [72] log likelihood: -306763.038914
EM: Round [73] log likelihood: -306763.037499
EM: Round [74] log likelihood: -306763.036164
EM: Round [75] log likelihood: -306763.034906
EM: Round [76] log likelihood: -306763.033718
EM: Round [77] log likelihood: -306763.032597
EM: Round [78] log likelihood: -306763.031538
EM: Round [79] log likelihood: -306763.030538
EM: Round [80] log likelihood: -306763.029592
EM: Round [81] log likelihood: -306763.028698
EM: Round [82] log likelihood: -306763.027852
EM: Round [83] log likelihood: -306763.027051
EM: Round [84] log likelihood: -306763.026293
EM: Round [85] log likelihood: -306763.025575
EM: Round [86] log likelihood: -306763.024895
EM: Round [87] log likelihood: -306763.024250
EM: Round [88] log likelihood: -306763.023639
EM: Round [89] log likelihood: -306763.023059
EM: Round [90] log likelihood: -306763.022509
EM: Round [91] log likelihood: -306763.021987
EM: Round [92] log likelihood: -306763.021491
EM: Round [93] log likelihood: -306763.021021
EM: Round [94] log likelihood: -306763.020574
EM: Round [95] log likelihood: -306763.020149
EM: Round [96] log likelihood: -306763.019745
EM: Round [97] log likelihood: -306763.019361
EM: Round [98] log likelihood: -306763.018996
EM: Round [99] log likelihood: -306763.018649
EM: Round [100] log likelihood: -306763.018318
EM: Round [101] log likelihood: -306763.018004
EM: Round [102] log likelihood: -306763.017704
EM: Round [103] log likelihood: -306763.017419
EM: Round [104] log likelihood: -306763.017147
EM: Round [105] log likelihood: -306763.016889
EM: Round [106] log likelihood: -306763.016642
EM: Round [107] log likelihood: -306763.016407
EM: Round [108] log likelihood: -306763.016182
EM: Round [109] log likelihood: -306763.015969
EM: Round [110] log likelihood: -306763.015765
EM: Round [111] log likelihood: -306763.015570
EM: Round [112] log likelihood: -306763.015384
EM: Round [113] log likelihood: -306763.015207
EM: Round [114] log likelihood: -306763.015037
EM: Round [115] log likelihood: -306763.014876
EM: Round [116] log likelihood: -306763.014721
EM: Round [117] log likelihood: -306763.014574
EM: Round [118] log likelihood: -306763.014432
EM: Round [119] log likelihood: -306763.014298
EM: Round [120] log likelihood: -306763.014169
EM: Round [121] log likelihood: -306763.014045
EM: Round [122] log likelihood: -306763.013927
EM: Round [123] log likelihood: -306763.013814
EM: Round [124] log likelihood: -306763.013706
EM: Round [125] log likelihood: -306763.013603
EM: Round [126] log likelihood: -306763.013504
EM: Stopping iterations at round 126 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -306797.885107
EM: Round [1] log likelihood: -306655.994617
EM: Round [2] log likelihood: -306605.574312
EM: Round [3] log likelihood: -306582.418188
EM: Round [4] log likelihood: -306570.531328
EM: Round [5] log likelihood: -306564.015680
EM: Round [6] log likelihood: -306560.244004
EM: Round [7] log likelihood: -306557.937600
EM: Round [8] log likelihood: -306556.446919
EM: Round [9] log likelihood: -306555.431484
EM: Round [10] log likelihood: -306554.706642
EM: Round [11] log likelihood: -306554.168245
EM: Round [12] log likelihood: -306553.754996
EM: Round [13] log likelihood: -306553.429221
EM: Round [14] log likelihood: -306553.166776
EM: Round [15] log likelihood: -306552.951578
EM: Round [16] log likelihood: -306552.772528
EM: Round [17] log likelihood: -306552.621729
EM: Round [18] log likelihood: -306552.493411
EM: Round [19] log likelihood: -306552.383257
EM: Round [20] log likelihood: -306552.287973
EM: Round [21] log likelihood: -306552.205003
EM: Round [22] log likelihood: -306552.132331
EM: Round [23] log likelihood: -306552.068347
EM: Round [24] log likelihood: -306552.011749
EM: Round [25] log likelihood: -306551.961476
EM: Round [26] log likelihood: -306551.916649
EM: Round [27] log likelihood: -306551.876542
EM: Round [28] log likelihood: -306551.840542
EM: Round [29] log likelihood: -306551.808134
EM: Round [30] log likelihood: -306551.778882
EM: Round [31] log likelihood: -306551.752412
EM: Round [32] log likelihood: -306551.728402
EM: Round [33] log likelihood: -306551.706577
EM: Round [34] log likelihood: -306551.686697
EM: Round [35] log likelihood: -306551.668554
EM: Round [36] log likelihood: -306551.651965
EM: Round [37] log likelihood: -306551.636773
EM: Round [38] log likelihood: -306551.622836
EM: Round [39] log likelihood: -306551.610031
EM: Round [40] log likelihood: -306551.598249
EM: Round [41] log likelihood: -306551.587393
EM: Round [42] log likelihood: -306551.577378
EM: Round [43] log likelihood: -306551.568127
EM: Round [44] log likelihood: -306551.559571
EM: Round [45] log likelihood: -306551.551649
EM: Round [46] log likelihood: -306551.544306
EM: Round [47] log likelihood: -306551.537493
EM: Round [48] log likelihood: -306551.531165
EM: Round [49] log likelihood: -306551.525282
EM: Round [50] log likelihood: -306551.519808
EM: Round [51] log likelihood: -306551.514710
EM: Round [52] log likelihood: -306551.509958
EM: Round [53] log likelihood: -306551.505525
EM: Round [54] log likelihood: -306551.501387
EM: Round [55] log likelihood: -306551.497521
EM: Round [56] log likelihood: -306551.493906
EM: Round [57] log likelihood: -306551.490525
EM: Round [58] log likelihood: -306551.487359
EM: Round [59] log likelihood: -306551.484393
EM: Round [60] log likelihood: -306551.481613
EM: Round [61] log likelihood: -306551.479006
EM: Round [62] log likelihood: -306551.476559
EM: Round [63] log likelihood: -306551.474261
EM: Round [64] log likelihood: -306551.472103
EM: Round [65] log likelihood: -306551.470074
EM: Round [66] log likelihood: -306551.468166
EM: Round [67] log likelihood: -306551.466371
EM: Round [68] log likelihood: -306551.464681
EM: Round [69] log likelihood: -306551.463090
EM: Round [70] log likelihood: -306551.461591
EM: Round [71] log likelihood: -306551.460177
EM: Round [72] log likelihood: -306551.458845
EM: Round [73] log likelihood: -306551.457588
EM: Round [74] log likelihood: -306551.456401
EM: Round [75] log likelihood: -306551.455281
EM: Round [76] log likelihood: -306551.454224
EM: Round [77] log likelihood: -306551.453225
EM: Round [78] log likelihood: -306551.452280
EM: Round [79] log likelihood: -306551.451388
EM: Round [80] log likelihood: -306551.450544
EM: Round [81] log likelihood: -306551.449745
EM: Round [82] log likelihood: -306551.448989
EM: Round [83] log likelihood: -306551.448274
EM: Round [84] log likelihood: -306551.447597
EM: Round [85] log likelihood: -306551.446956
EM: Round [86] log likelihood: -306551.446348
EM: Round [87] log likelihood: -306551.445772
EM: Round [88] log likelihood: -306551.445227
EM: Round [89] log likelihood: -306551.444709
EM: Round [90] log likelihood: -306551.444219
EM: Round [91] log likelihood: -306551.443753
EM: Round [92] log likelihood: -306551.443312
EM: Round [93] log likelihood: -306551.442893
EM: Round [94] log likelihood: -306551.442496
EM: Round [95] log likelihood: -306551.442118
EM: Round [96] log likelihood: -306551.441760
EM: Round [97] log likelihood: -306551.441419
EM: Round [98] log likelihood: -306551.441096
EM: Round [99] log likelihood: -306551.440789
EM: Round [100] log likelihood: -306551.440497
EM: Round [101] log likelihood: -306551.440220
EM: Round [102] log likelihood: -306551.439956
EM: Round [103] log likelihood: -306551.439705
EM: Round [104] log likelihood: -306551.439467
EM: Round [105] log likelihood: -306551.439240
EM: Round [106] log likelihood: -306551.439025
EM: Round [107] log likelihood: -306551.438820
EM: Round [108] log likelihood: -306551.438624
EM: Round [109] log likelihood: -306551.438439
EM: Round [110] log likelihood: -306551.438262
EM: Round [111] log likelihood: -306551.438094
EM: Round [112] log likelihood: -306551.437934
EM: Round [113] log likelihood: -306551.437781
EM: Round [114] log likelihood: -306551.437636
EM: Round [115] log likelihood: -306551.437498
EM: Round [116] log likelihood: -306551.437366
EM: Round [117] log likelihood: -306551.437241
EM: Round [118] log likelihood: -306551.437121
EM: Round [119] log likelihood: -306551.437007
EM: Round [120] log likelihood: -306551.436899
EM: Round [121] log likelihood: -306551.436795
EM: Round [122] log likelihood: -306551.436697
EM: Stopping iterations at round 122 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.ziEJaDfRag/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.ziEJaDfRag/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.ziEJaDfRag/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 295476694 > /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.ziEJaDfRag/ctat_genome_lib_build_dir > /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.ziEJaDfRag/ctat_genome_lib_build_dir --annotate /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.ziEJaDfRag/ctat_genome_lib_build_dir
-done, see /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.ziEJaDfRag/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1956, filtered: 13271)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.ziEJaDfRag/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.ziEJaDfRag/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000281103.2]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000263011.1]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000277737.3]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000241104.5]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000214975.4]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000235290.1]
WARNING, no entry stored in dbm for [ENSG00000235768.1]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000233747.1]
WARNING, no entry stored in dbm for [ENSG00000270378.1]
WARNING, no entry stored in dbm for [ENSG00000170858.10]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000233606.2]
WARNING, no entry stored in dbm for [ENSG00000233606.2]
WARNING, no entry stored in dbm for [ENSG00000167747.15]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000279689.1]
WARNING, no entry stored in dbm for [ENSG00000231365.6]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000237877.7]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000237037.9]
WARNING, no entry stored in dbm for [ENSG00000237037.9]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000242299.1]
WARNING, no entry stored in dbm for [ENSG00000233006.8]
WARNING, no entry stored in dbm for [ENSG00000228109.1]
WARNING, no entry stored in dbm for [ENSG00000248891.2]
WARNING, no entry stored in dbm for [ENSG00000281903.2]
WARNING, no entry stored in dbm for [ENSG00000229981.8]
WARNING, no entry stored in dbm for [ENSG00000231690.3]
WARNING, no entry stored in dbm for [ENSG00000224520.2]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000196301.3]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000286485.1]
WARNING, no entry stored in dbm for [ENSG00000287400.1]
WARNING, no entry stored in dbm for [ENSG00000259953.2]
WARNING, no entry stored in dbm for [ENSG00000225022.1]
WARNING, no entry stored in dbm for [ENSG00000271064.1]
WARNING, no entry stored in dbm for [ENSG00000226312.7]
WARNING, no entry stored in dbm for [ENSG00000260942.1]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000280287.1]
WARNING, no entry stored in dbm for [ENSG00000237586.3]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000259768.6]
WARNING, no entry stored in dbm for [ENSG00000249713.1]
WARNING, no entry stored in dbm for [ENSG00000269001.2]
WARNING, no entry stored in dbm for [ENSG00000219665.8]
WARNING, no entry stored in dbm for [ENSG00000229330.2]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000232456.1]
WARNING, no entry stored in dbm for [ENSG00000263072.8]
WARNING, no entry stored in dbm for [ENSG00000259948.2]
WARNING, no entry stored in dbm for [ENSG00000230629.2]
WARNING, no entry stored in dbm for [ENSG00000255050.1]
WARNING, no entry stored in dbm for [ENSG00000272267.2]
WARNING, no entry stored in dbm for [ENSG00000133519.12]
WARNING, no entry stored in dbm for [ENSG00000215478.8]
WARNING, no entry stored in dbm for [ENSG00000226471.6]
WARNING, no entry stored in dbm for [ENSG00000223694.1]
WARNING, no entry stored in dbm for [ENSG00000238098.9]
WARNING, no entry stored in dbm for [ENSG00000228113.7]
WARNING, no entry stored in dbm for [ENSG00000229023.1]
WARNING, no entry stored in dbm for [ENSG00000257771.6]
WARNING, no entry stored in dbm for [ENSG00000229124.7]
WARNING, no entry stored in dbm for [ENSG00000261360.1]
WARNING, no entry stored in dbm for [ENSG00000229036.7]
WARNING, no entry stored in dbm for [ENSG00000283698.1]
WARNING, no entry stored in dbm for [ENSG00000275897.1]
WARNING, no entry stored in dbm for [ENSG00000213048.3]
WARNING, no entry stored in dbm for [ENSG00000234761.1]
WARNING, no entry stored in dbm for [ENSG00000273032.3]
WARNING, no entry stored in dbm for [ENSG00000249348.1]
WARNING, no entry stored in dbm for [ENSG00000203307.2]
WARNING, no entry stored in dbm for [ENSG00000270332.2]
WARNING, no entry stored in dbm for [ENSG00000189136.9]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000229816.1]
WARNING, no entry stored in dbm for [ENSG00000225022.1]
WARNING, no entry stored in dbm for [ENSG00000224188.1]
WARNING, no entry stored in dbm for [ENSG00000225022.1]
WARNING, no entry stored in dbm for [ENSG00000258901.2]
WARNING, no entry stored in dbm for [ENSG00000267506.5]
WARNING, no entry stored in dbm for [ENSG00000237298.10]
WARNING, no entry stored in dbm for [ENSG00000234405.2]
WARNING, no entry stored in dbm for [ENSG00000227372.12]
WARNING, no entry stored in dbm for [ENSG00000259556.2]
WARNING, no entry stored in dbm for [ENSG00000247121.7]
WARNING, no entry stored in dbm for [ENSG00000225116.1]
WARNING, no entry stored in dbm for [ENSG00000241654.1]
WARNING, no entry stored in dbm for [ENSG00000279762.3]
WARNING, no entry stored in dbm for [ENSG00000212978.6]
WARNING, no entry stored in dbm for [ENSG00000248787.2]
WARNING, no entry stored in dbm for [ENSG00000259357.2]
WARNING, no entry stored in dbm for [ENSG00000180846.8]
WARNING, no entry stored in dbm for [ENSG00000241316.8]
WARNING, no entry stored in dbm for [ENSG00000281649.2]
WARNING, no entry stored in dbm for [ENSG00000247708.8]
WARNING, no entry stored in dbm for [ENSG00000247708.8]
WARNING, no entry stored in dbm for [ENSG00000228033.6]
WARNING, no entry stored in dbm for [ENSG00000277072.5]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000259696.2]
WARNING, no entry stored in dbm for [ENSG00000197558.13]
WARNING, no entry stored in dbm for [ENSG00000258057.6]
WARNING, no entry stored in dbm for [ENSG00000182776.4]
WARNING, no entry stored in dbm for [ENSG00000269893.8]
WARNING, no entry stored in dbm for [ENSG00000203875.13]
WARNING, no entry stored in dbm for [ENSG00000175061.18]
WARNING, no entry stored in dbm for [ENSG00000267106.8]
WARNING, no entry stored in dbm for [ENSG00000232803.1]
WARNING, no entry stored in dbm for [ENSG00000213393.5]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000228484.3]
WARNING, no entry stored in dbm for [ENSG00000174407.13]
WARNING, no entry stored in dbm for [ENSG00000274775.2]
WARNING, no entry stored in dbm for [ENSG00000273396.3]
WARNING, no entry stored in dbm for [ENSG00000226232.8]
WARNING, no entry stored in dbm for [ENSG00000080947.15]
WARNING, no entry stored in dbm for [ENSG00000226627.2]
WARNING, no entry stored in dbm for [ENSG00000267422.1]
WARNING, no entry stored in dbm for [ENSG00000214765.8]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000283050.2]
WARNING, no entry stored in dbm for [ENSG00000244381.1]
WARNING, no entry stored in dbm for [ENSG00000227707.1]
WARNING, no entry stored in dbm for [ENSG00000261429.2]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000231837.2]
WARNING, no entry stored in dbm for [ENSG00000225482.1]
WARNING, no entry stored in dbm for [ENSG00000231541.1]
WARNING, no entry stored in dbm for [ENSG00000236477.1]
WARNING, no entry stored in dbm for [ENSG00000242951.1]
WARNING, no entry stored in dbm for [ENSG00000240983.1]
WARNING, no entry stored in dbm for [ENSG00000226216.1]
WARNING, no entry stored in dbm for [ENSG00000238069.1]
WARNING, no entry stored in dbm for [ENSG00000244705.1]
WARNING, no entry stored in dbm for [ENSG00000267355.2]
WARNING, no entry stored in dbm for [ENSG00000242067.1]
WARNING, no entry stored in dbm for [ENSG00000219863.5]
WARNING, no entry stored in dbm for [ENSG00000213495.3]
WARNING, no entry stored in dbm for [ENSG00000233445.1]
WARNING, no entry stored in dbm for [ENSG00000213885.4]
WARNING, no entry stored in dbm for [ENSG00000226624.1]
WARNING, no entry stored in dbm for [ENSG00000242941.1]
WARNING, no entry stored in dbm for [ENSG00000204194.1]
WARNING, no entry stored in dbm for [ENSG00000206888.1]
WARNING, no entry stored in dbm for [ENSG00000264618.2]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000264618.2]
WARNING, no entry stored in dbm for [ENSG00000240869.3]
WARNING, no entry stored in dbm for [ENSG00000240606.3]
WARNING, no entry stored in dbm for [ENSG00000275014.1]
WARNING, no entry stored in dbm for [ENSG00000202058.1]
WARNING, no entry stored in dbm for [ENSG00000222386.1]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000255468.7]
WARNING, no entry stored in dbm for [ENSG00000278834.1]
WARNING, no entry stored in dbm for [ENSG00000261097.1]
WARNING, no entry stored in dbm for [ENSG00000226860.1]
WARNING, no entry stored in dbm for [ENSG00000249418.2]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000227354.7]
WARNING, no entry stored in dbm for [ENSG00000256994.2]
WARNING, no entry stored in dbm for [ENSG00000287286.1]
WARNING, no entry stored in dbm for [ENSG00000228903.7]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000242834.1]
WARNING, no entry stored in dbm for [ENSG00000275110.1]
WARNING, no entry stored in dbm for [ENSG00000267122.1]
WARNING, no entry stored in dbm for [ENSG00000234353.2]
WARNING, no entry stored in dbm for [ENSG00000228415.3]
WARNING, no entry stored in dbm for [ENSG00000214182.5]
WARNING, no entry stored in dbm for [ENSG00000234544.2]
WARNING, no entry stored in dbm for [ENSG00000230487.8]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000230082.1]
WARNING, no entry stored in dbm for [ENSG00000279019.1]
WARNING, no entry stored in dbm for [ENSG00000215089.3]
WARNING, no entry stored in dbm for [ENSG00000235151.1]
WARNING, no entry stored in dbm for [ENSG00000224221.1]
WARNING, no entry stored in dbm for [ENSG00000232316.2]
WARNING, no entry stored in dbm for [ENSG00000279853.1]
WARNING, no entry stored in dbm for [ENSG00000241472.7]
WARNING, no entry stored in dbm for [ENSG00000205212.5]
WARNING, no entry stored in dbm for [ENSG00000213178.3]
WARNING, no entry stored in dbm for [ENSG00000268531.3]
WARNING, no entry stored in dbm for [ENSG00000227375.6]
WARNING, no entry stored in dbm for [ENSG00000226947.1]
WARNING, no entry stored in dbm for [ENSG00000227195.11]
WARNING, no entry stored in dbm for [ENSG00000244257.5]
WARNING, no entry stored in dbm for [ENSG00000246982.7]
WARNING, no entry stored in dbm for [ENSG00000287643.1]
WARNING, no entry stored in dbm for [ENSG00000288576.1]
WARNING, no entry stored in dbm for [ENSG00000279393.1]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000247774.7]
WARNING, no entry stored in dbm for [ENSG00000281880.2]
WARNING, no entry stored in dbm for [ENSG00000254294.1]
WARNING, no entry stored in dbm for [ENSG00000235213.1]
WARNING, no entry stored in dbm for [ENSG00000267450.1]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000227954.7]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000287975.1]
WARNING, no entry stored in dbm for [ENSG00000106133.18]
WARNING, no entry stored in dbm for [ENSG00000259275.4]
WARNING, no entry stored in dbm for [ENSG00000226703.1]
WARNING, no entry stored in dbm for [ENSG00000213239.3]
WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [ENSG00000234967.2]
WARNING, no entry stored in dbm for [ENSG00000260032.2]
WARNING, no entry stored in dbm for [ENSG00000241709.3]
WARNING, no entry stored in dbm for [ENSG00000181577.16]
WARNING, no entry stored in dbm for [ENSG00000251254.1]
WARNING, no entry stored in dbm for [ENSG00000177640.16]
WARNING, no entry stored in dbm for [ENSG00000249752.1]
WARNING, no entry stored in dbm for [ENSG00000198496.12]
WARNING, no entry stored in dbm for [ENSG00000198496.12]
WARNING, no entry stored in dbm for [ENSG00000198496.12]
WARNING, no entry stored in dbm for [ENSG00000279134.1]
WARNING, no entry stored in dbm for [ENSG00000198763.3]
WARNING, no entry stored in dbm for [ENSG00000259186.1]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000215386.13]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000234231.4]
WARNING, no entry stored in dbm for [ENSG00000224184.6]
WARNING, no entry stored in dbm for [ENSG00000229989.4]
WARNING, no entry stored in dbm for [ENSG00000234931.1]
WARNING, no entry stored in dbm for [ENSG00000281731.3]
WARNING, no entry stored in dbm for [ENSG00000258874.1]
WARNING, no entry stored in dbm for [ENSG00000253200.1]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000227456.9]
WARNING, no entry stored in dbm for [ENSG00000259948.2]
WARNING, no entry stored in dbm for [ENSG00000238133.6]
WARNING, no entry stored in dbm for [ENSG00000267278.6]
WARNING, no entry stored in dbm for [ENSG00000248973.3]
WARNING, no entry stored in dbm for [ENSG00000225022.1]
WARNING, no entry stored in dbm for [ENSG00000224888.4]
WARNING, no entry stored in dbm for [ENSG00000248736.3]
WARNING, no entry stored in dbm for [ENSG00000227425.1]
WARNING, no entry stored in dbm for [ENSG00000261801.6]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000284668.2]
WARNING, no entry stored in dbm for [ENSG00000285985.1]
WARNING, no entry stored in dbm for [ENSG00000231056.1]
WARNING, no entry stored in dbm for [ENSG00000228437.5]
WARNING, no entry stored in dbm for [ENSG00000250891.2]
WARNING, no entry stored in dbm for [ENSG00000231826.6]
WARNING, no entry stored in dbm for [ENSG00000226476.6]
WARNING, no entry stored in dbm for [ENSG00000225640.1]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000261432.1]
WARNING, no entry stored in dbm for [ENSG00000198685.4]
WARNING, no entry stored in dbm for [ENSG00000228065.11]
WARNING, no entry stored in dbm for [ENSG00000260924.2]
WARNING, no entry stored in dbm for [ENSG00000235437.8]
WARNING, no entry stored in dbm for [ENSG00000245937.8]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000235597.2]
WARNING, no entry stored in dbm for [ENSG00000224559.2]
WARNING, no entry stored in dbm for [ENSG00000242759.8]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000258279.4]
WARNING, no entry stored in dbm for [ENSG00000228221.6]
WARNING, no entry stored in dbm for [ENSG00000260910.2]
WARNING, no entry stored in dbm for [ENSG00000281392.2]
WARNING, no entry stored in dbm for [ENSG00000179219.5]
WARNING, no entry stored in dbm for [ENSG00000267354.1]
WARNING, no entry stored in dbm for [ENSG00000224699.9]
WARNING, no entry stored in dbm for [ENSG00000285744.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000187686.4]
WARNING, no entry stored in dbm for [ENSG00000228666.1]
WARNING, no entry stored in dbm for [ENSG00000239569.3]
WARNING, no entry stored in dbm for [ENSG00000266920.1]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000259639.6]
WARNING, no entry stored in dbm for [ENSG00000248634.1]
WARNING, no entry stored in dbm for [ENSG00000203645.2]
WARNING, no entry stored in dbm for [ENSG00000273377.1]
WARNING, no entry stored in dbm for [ENSG00000228340.6]
WARNING, no entry stored in dbm for [ENSG00000237037.9]
WARNING, no entry stored in dbm for [ENSG00000237750.2]
WARNING, no entry stored in dbm for [ENSG00000281664.1]
WARNING, no entry stored in dbm for [ENSG00000260473.2]
WARNING, no entry stored in dbm for [ENSG00000254777.5]
WARNING, no entry stored in dbm for [ENSG00000270760.1]
WARNING, no entry stored in dbm for [ENSG00000272871.1]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000235142.10]
WARNING, no entry stored in dbm for [ENSG00000286848.1]
WARNING, no entry stored in dbm for [ENSG00000270864.1]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000200795.1]
WARNING, no entry stored in dbm for [ENSG00000258352.1]
WARNING, no entry stored in dbm for [ENSG00000182796.14]
WARNING, no entry stored in dbm for [ENSG00000272677.1]
WARNING, no entry stored in dbm for [ENSG00000212769.5]
WARNING, no entry stored in dbm for [ENSG00000235390.4]
WARNING, no entry stored in dbm for [ENSG00000237092.2]
WARNING, no entry stored in dbm for [ENSG00000234705.2]
WARNING, no entry stored in dbm for [ENSG00000265179.7]
WARNING, no entry stored in dbm for [ENSG00000259163.2]
WARNING, no entry stored in dbm for [ENSG00000214837.8]
WARNING, no entry stored in dbm for [ENSG00000279066.1]
WARNING, no entry stored in dbm for [ENSG00000245468.4]
WARNING, no entry stored in dbm for [ENSG00000185837.3]
WARNING, no entry stored in dbm for [ENSG00000229124.7]
WARNING, no entry stored in dbm for [ENSG00000213244.3]
WARNING, no entry stored in dbm for [ENSG00000261168.1]
WARNING, no entry stored in dbm for [ENSG00000234261.4]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000269540.1]
WARNING, no entry stored in dbm for [ENSG00000286734.1]
WARNING, no entry stored in dbm for [ENSG00000199377.1]
WARNING, no entry stored in dbm for [ENSG00000288109.1]
WARNING, no entry stored in dbm for [ENSG00000242294.6]
WARNING, no entry stored in dbm for [ENSG00000255471.1]
WARNING, no entry stored in dbm for [ENSG00000250682.6]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000267287.1]
WARNING, no entry stored in dbm for [ENSG00000259394.2]
WARNING, no entry stored in dbm for [ENSG00000275340.1]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000244026.6]
WARNING, no entry stored in dbm for [ENSG00000248243.1]
WARNING, no entry stored in dbm for [ENSG00000250662.1]
WARNING, no entry stored in dbm for [ENSG00000260347.1]
WARNING, no entry stored in dbm for [ENSG00000226808.3]
WARNING, no entry stored in dbm for [ENSG00000286456.1]
WARNING, no entry stored in dbm for [ENSG00000255248.9]
WARNING, no entry stored in dbm for [ENSG00000238230.2]
WARNING, no entry stored in dbm for [ENSG00000286346.1]
WARNING, no entry stored in dbm for [ENSG00000235823.3]
WARNING, no entry stored in dbm for [ENSG00000184991.3]
WARNING, no entry stored in dbm for [ENSG00000215093.3]
WARNING, no entry stored in dbm for [ENSG00000259612.1]
WARNING, no entry stored in dbm for [ENSG00000250320.6]
WARNING, no entry stored in dbm for [ENSG00000266729.5]
WARNING, no entry stored in dbm for [ENSG00000235411.1]
WARNING, no entry stored in dbm for [ENSG00000229358.3]
WARNING, no entry stored in dbm for [ENSG00000277837.1]
WARNING, no entry stored in dbm for [ENSG00000231890.8]
WARNING, no entry stored in dbm for [ENSG00000251087.3]
WARNING, no entry stored in dbm for [ENSG00000261564.1]
WARNING, no entry stored in dbm for [ENSG00000250131.2]
WARNING, no entry stored in dbm for [ENSG00000242193.11]
WARNING, no entry stored in dbm for [ENSG00000233025.1]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000237773.7]
WARNING, no entry stored in dbm for [ENSG00000249047.2]
WARNING, no entry stored in dbm for [ENSG00000246695.8]
WARNING, no entry stored in dbm for [ENSG00000286820.1]
WARNING, no entry stored in dbm for [ENSG00000287825.1]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000238191.3]
WARNING, no entry stored in dbm for [ENSG00000224533.4]
WARNING, no entry stored in dbm for [ENSG00000286878.1]
WARNING, no entry stored in dbm for [ENSG00000231187.3]
WARNING, no entry stored in dbm for [ENSG00000259362.2]
WARNING, no entry stored in dbm for [ENSG00000272888.7]
WARNING, no entry stored in dbm for [ENSG00000243066.3]
WARNING, no entry stored in dbm for [ENSG00000271986.2]
WARNING, no entry stored in dbm for [ENSG00000244692.3]
WARNING, no entry stored in dbm for [ENSG00000242315.3]
WARNING, no entry stored in dbm for [ENSG00000239224.3]
WARNING, no entry stored in dbm for [ENSG00000243426.3]
WARNING, no entry stored in dbm for [ENSG00000242493.3]
WARNING, no entry stored in dbm for [ENSG00000243738.3]
WARNING, no entry stored in dbm for [ENSG00000249026.2]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000227252.2]
WARNING, no entry stored in dbm for [ENSG00000198221.10]
WARNING, no entry stored in dbm for [ENSG00000228544.1]
WARNING, no entry stored in dbm for [ENSG00000228544.1]
WARNING, no entry stored in dbm for [ENSG00000254633.2]
WARNING, no entry stored in dbm for [ENSG00000256433.3]
WARNING, no entry stored in dbm for [ENSG00000233013.10]
WARNING, no entry stored in dbm for [ENSG00000249669.10]
WARNING, no entry stored in dbm for [ENSG00000226194.5]
WARNING, no entry stored in dbm for [ENSG00000228775.8]
WARNING, no entry stored in dbm for [ENSG00000204661.9]
WARNING, no entry stored in dbm for [ENSG00000232993.1]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000249345.8]
WARNING, no entry stored in dbm for [ENSG00000217801.10]
WARNING, no entry stored in dbm for [ENSG00000215580.11]
WARNING, no entry stored in dbm for [ENSG00000279022.1]
WARNING, no entry stored in dbm for [ENSG00000270049.3]
WARNING, no entry stored in dbm for [ENSG00000215162.2]
WARNING, no entry stored in dbm for [ENSG00000254775.2]
WARNING, no entry stored in dbm for [ENSG00000251365.4]
WARNING, no entry stored in dbm for [ENSG00000247675.7]
WARNING, no entry stored in dbm for [ENSG00000227881.1]
WARNING, no entry stored in dbm for [ENSG00000220517.2]
WARNING, no entry stored in dbm for [ENSG00000267080.6]
WARNING, no entry stored in dbm for [ENSG00000203993.6]
WARNING, no entry stored in dbm for [ENSG00000275613.2]
WARNING, no entry stored in dbm for [ENSG00000257027.1]
WARNING, no entry stored in dbm for [ENSG00000249476.2]
WARNING, no entry stored in dbm for [ENSG00000255191.1]
WARNING, no entry stored in dbm for [ENSG00000231811.3]
WARNING, no entry stored in dbm for [ENSG00000245970.2]
WARNING, no entry stored in dbm for [ENSG00000234377.7]
WARNING, no entry stored in dbm for [ENSG00000254632.2]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000255136.3]
WARNING, no entry stored in dbm for [ENSG00000235286.1]
WARNING, no entry stored in dbm for [ENSG00000218186.2]
WARNING, no entry stored in dbm for [ENSG00000283633.1]
WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [ENSG00000225548.7]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000250328.6]
WARNING, no entry stored in dbm for [ENSG00000227416.2]
WARNING, no entry stored in dbm for [ENSG00000287338.1]
WARNING, no entry stored in dbm for [ENSG00000286724.1]
WARNING, no entry stored in dbm for [ENSG00000237094.12]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000232576.2]
WARNING, no entry stored in dbm for [ENSG00000286391.1]
WARNING, no entry stored in dbm for [ENSG00000218418.2]
WARNING, no entry stored in dbm for [ENSG00000238260.1]
WARNING, no entry stored in dbm for [ENSG00000240291.1]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000235582.2]
WARNING, no entry stored in dbm for [ENSG00000215016.2]
WARNING, no entry stored in dbm for [ENSG00000285615.1]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000270066.3]
WARNING, no entry stored in dbm for [ENSG00000218483.1]
WARNING, no entry stored in dbm for [ENSG00000273373.1]
WARNING, no entry stored in dbm for [ENSG00000225339.4]
WARNING, no entry stored in dbm for [ENSG00000258471.2]
WARNING, no entry stored in dbm for [ENSG00000247970.2]
WARNING, no entry stored in dbm for [ENSG00000286650.1]
WARNING, no entry stored in dbm for [ENSG00000230615.7]
WARNING, no entry stored in dbm for [ENSG00000230615.7]
WARNING, no entry stored in dbm for [ENSG00000237390.1]
WARNING, no entry stored in dbm for [ENSG00000220685.3]
WARNING, no entry stored in dbm for [ENSG00000268858.2]
WARNING, no entry stored in dbm for [ENSG00000237214.3]
WARNING, no entry stored in dbm for [ENSG00000237927.1]
WARNING, no entry stored in dbm for [ENSG00000287268.1]
WARNING, no entry stored in dbm for [ENSG00000285407.1]
WARNING, no entry stored in dbm for [ENSG00000151631.8]
WARNING, no entry stored in dbm for [ENSG00000234062.8]
WARNING, no entry stored in dbm for [ENSG00000251474.6]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000259315.1]
WARNING, no entry stored in dbm for [ENSG00000223548.1]
WARNING, no entry stored in dbm for [ENSG00000274265.5]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000279047.4]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000282206.1]
WARNING, no entry stored in dbm for [ENSG00000286909.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000262413.1]
WARNING, no entry stored in dbm for [ENSG00000279821.1]
WARNING, no entry stored in dbm for [ENSG00000279143.1]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000198526.7]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000257691.2]
WARNING, no entry stored in dbm for [ENSG00000214135.8]
WARNING, no entry stored in dbm for [ENSG00000260498.6]
WARNING, no entry stored in dbm for [ENSG00000259704.2]
WARNING, no entry stored in dbm for [ENSG00000277511.1]
WARNING, no entry stored in dbm for [ENSG00000214942.6]
WARNING, no entry stored in dbm for [ENSG00000262223.8]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000278887.2]
WARNING, no entry stored in dbm for [ENSG00000260776.6]
WARNING, no entry stored in dbm for [ENSG00000259692.6]
WARNING, no entry stored in dbm for [ENSG00000259692.6]
WARNING, no entry stored in dbm for [ENSG00000282375.1]
WARNING, no entry stored in dbm for [ENSG00000277096.1]
WARNING, no entry stored in dbm for [ENSG00000277096.1]
WARNING, no entry stored in dbm for [ENSG00000248912.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000256625.1]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000254641.1]
WARNING, no entry stored in dbm for [ENSG00000264164.1]
WARNING, no entry stored in dbm for [ENSG00000244266.1]
WARNING, no entry stored in dbm for [ENSG00000229143.1]
WARNING, no entry stored in dbm for [ENSG00000235530.7]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000228643.1]
WARNING, no entry stored in dbm for [ENSG00000229337.2]
WARNING, no entry stored in dbm for [ENSG00000287344.1]
WARNING, no entry stored in dbm for [ENSG00000226963.1]
WARNING, no entry stored in dbm for [ENSG00000288091.1]
WARNING, no entry stored in dbm for [ENSG00000225205.5]
WARNING, no entry stored in dbm for [ENSG00000236978.1]
WARNING, no entry stored in dbm for [ENSG00000242299.1]
WARNING, no entry stored in dbm for [ENSG00000287188.1]
WARNING, no entry stored in dbm for [ENSG00000257337.7]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000217178.1]
WARNING, no entry stored in dbm for [ENSG00000253200.1]
WARNING, no entry stored in dbm for [ENSG00000249857.1]
WARNING, no entry stored in dbm for [ENSG00000286193.2]
WARNING, no entry stored in dbm for [ENSG00000243517.1]
WARNING, no entry stored in dbm for [ENSG00000244313.3]
WARNING, no entry stored in dbm for [ENSG00000223628.2]
WARNING, no entry stored in dbm for [ENSG00000241846.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000286373.1]
WARNING, no entry stored in dbm for [ENSG00000254777.5]
WARNING, no entry stored in dbm for [ENSG00000260276.2]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000251498.1]
WARNING, no entry stored in dbm for [ENSG00000213963.6]
WARNING, no entry stored in dbm for [ENSG00000287844.1]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000249406.3]
WARNING, no entry stored in dbm for [ENSG00000259583.3]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000259341.2]
WARNING, no entry stored in dbm for [ENSG00000287299.1]
WARNING, no entry stored in dbm for [ENSG00000213228.5]
WARNING, no entry stored in dbm for [ENSG00000240401.9]
WARNING, no entry stored in dbm for [ENSG00000203327.2]
WARNING, no entry stored in dbm for [ENSG00000260115.1]
WARNING, no entry stored in dbm for [ENSG00000274184.1]
WARNING, no entry stored in dbm for [ENSG00000277978.1]
WARNING, no entry stored in dbm for [ENSG00000268884.1]
WARNING, no entry stored in dbm for [ENSG00000230721.1]
WARNING, no entry stored in dbm for [ENSG00000247121.7]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000237513.2]
WARNING, no entry stored in dbm for [ENSG00000273063.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000231815.2]
WARNING, no entry stored in dbm for [ENSG00000286125.1]
WARNING, no entry stored in dbm for [ENSG00000269968.1]
WARNING, no entry stored in dbm for [ENSG00000250770.3]
WARNING, no entry stored in dbm for [ENSG00000264990.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000223561.7]
WARNING, no entry stored in dbm for [ENSG00000278920.1]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000243554.1]
WARNING, no entry stored in dbm for [ENSG00000235623.2]
WARNING, no entry stored in dbm for [ENSG00000269972.1]
WARNING, no entry stored in dbm for [ENSG00000119440.8]
WARNING, no entry stored in dbm for [ENSG00000201607.1]
WARNING, no entry stored in dbm for [ENSG00000238098.9]
WARNING, no entry stored in dbm for [ENSG00000279821.1]
WARNING, no entry stored in dbm for [ENSG00000224486.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.ziEJaDfRag/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)