AIH curated blacklist: matched 11 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 277
Pass (FILTER=PASS): 15 (5.4%)
Fail (FILTER=FAIL): 262 (94.6%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 11
All 11 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 63
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 29
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 26
confidence_below_min(low<high): 21
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 20
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 19
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 11
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 3
Breakdown by confidence:
high: 15 pass, 8 fail (total: 23)
low: 0 pass, 136 fail (total: 136)
medium: 0 pass, 118 fail (total: 118)
Arriba filter: 277 rows -> 15 PASS; wrote tih_rna_sample_00451_B23WHTKLT4_2.arriba.fusions.filtered.tsv and tih_rna_sample_00451_B23WHTKLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00451_B23WHTKLT4_2.arriba.fusions.filter_summary.txt