AIH curated blacklist: matched 11 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 313
Pass (FILTER=PASS): 53 (16.9%)
Fail (FILTER=FAIL): 260 (83.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 11
All 11 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 66
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 35
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 26
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 21
confidence_below_min(low<high): 16
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 8
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 5
total_reads_below_min(3.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 3
Breakdown by confidence:
high: 53 pass, 9 fail (total: 62)
low: 0 pass, 107 fail (total: 107)
medium: 0 pass, 144 fail (total: 144)
Arriba filter: 313 rows -> 53 PASS; wrote tih_rna_sample_00136_B23WHTKLT4_2.arriba.fusions.filtered.tsv and tih_rna_sample_00136_B23WHTKLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00136_B23WHTKLT4_2.arriba.fusions.filter_summary.txt