Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/96/97124802979722f69bac3808f7b360/659_ciZ-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-99ebc9bd-f9f1-4b2c-b9a0-02ddaf99f257/75/8438968e551d03cb7cc7a0681df9ae/dummy_file_fusioncatcher.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/c96a1d931ddbdd5e6498ab7ed421ce/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/c96a1d931ddbdd5e6498ab7ed421ce/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/701338a9077eba86f891907a8adfdb/659_ciZ-T1-TRNA-1_B23WHTKLT4_1.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
==> STAGING COMPLETE (6 inputs)

Running application...

  0%|          | 0/6 [00:00<?, ?it/s]NCOA4--RET
starfusion
arriba
PDE8A--LRRC28
starfusion
arriba
SYNPO2--SYNPO2
arriba
STK39--C8orf33(5367)
arriba
SLAIN2--TEC
arriba
SLAIN2--SLAIN2
arriba

Processing NCOA4--RET:   0%|          | 0/6 [00:00<?, ?it/s]
Processing NCOA4--RET:  17%|█▋        | 1/6 [00:00<00:00,  9.23it/s]
Processing PDE8A--LRRC28:  17%|█▋        | 1/6 [00:00<00:00,  9.23it/s]
Processing PDE8A--LRRC28:  33%|███▎      | 2/6 [00:00<00:00,  9.46it/s]
Processing SYNPO2--SYNPO2:  33%|███▎      | 2/6 [00:00<00:00,  9.46it/s]
Processing SYNPO2--SYNPO2:  50%|█████     | 3/6 [00:00<00:00,  9.54it/s]
Processing STK39--C8orf33(5367):  50%|█████     | 3/6 [00:00<00:00,  9.54it/s]
Processing STK39--C8orf33(5367):  67%|██████▋   | 4/6 [00:00<00:00,  9.58it/s]
Processing SLAIN2--TEC:  67%|██████▋   | 4/6 [00:00<00:00,  9.58it/s]         
Processing SLAIN2--TEC:  83%|████████▎ | 5/6 [00:00<00:00,  9.60it/s]
Processing SLAIN2--SLAIN2:  83%|████████▎ | 5/6 [00:00<00:00,  9.60it/s]
Processing SLAIN2--SLAIN2: 100%|██████████| 6/6 [00:00<00:00,  9.61it/s]
Processing SLAIN2--SLAIN2: 100%|██████████| 6/6 [00:00<00:00,  9.56it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory