[W::hts_idx_load3] The index file is older than the data file: 659_bUW-T1-TRNA-1_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	362003735
Known Splicing Events:	358679131
Partial Novel Splicing Events:	1596050
Novel Splicing Events:	1591347
Filtered Splicing Events:	137207

Total splicing  Junctions:	544541
Known Splicing Junctions:	258058
Partial Novel Splicing Junctions:	142679
Novel Splicing Junctions:	143804

===================================================================
Create BED file ...
Create Interact file ...