NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (tih_rna_sample_00121_B23WHTKLT4_1) - dev_rna_exp0020-73d51683 - Workflow Tracker

Runs
dev_rna_exp0020-73d51683
Tasks
GATK4_MARKDUPLICATES (tih_rna_sample_00121_B23WHTKLT4_1)

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Task Info

Status: succeeded
Hash: 11daacf00052
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: tih_rna_sample_00121_B23WHTKLT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: ff/20bfcf
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ff/20bfcf5bb26c812eb2df82ea1a9427
Native ID: nf-ff20bfcf5bb26c812eb2df82ea1a9427-0fef8

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 106.4 GB / 148.0 GB
Process I/O (rchar / wchar): 54.6 GB / 36.9 GB
Disk I/O (read / write): 445.9 MB / 36.9 GB
Host: i-054c612680b4d7726 ( on-demand)

Runtime

Submitted: Jun 08, 2026 1:58:32 AM
Completed: Jun 08, 2026 2:48:54 AM
Total Duration: 50m 21s

Phases

Queue: 42s
Execution: 46m 30s
Stage/Unstage: 3m 9s

Attempt 1

Execution

Status: failed
Hash: 03/f3acd9
Failure Reason: spot eviction ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/03/f3acd954dce65bd5aef827378c9b58
Native ID: nf-03f3acd954dce65bd5aef827378c9b58-f2aaf

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 74.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0c436b0734f574031 ( spot)

Runtime

Submitted: Jun 08, 2026 1:37:27 AM
Completed: Jun 08, 2026 1:58:32 AM
Total Duration: 21m 4s

Phases

Queue: 21m 4s
Execution: -
Stage/Unstage: -