Started job on | Jun 08 09:36:18
Started mapping on | Jun 08 09:42:47
Finished on | Jun 08 10:23:13
Mapping speed, Million of reads per hour | 278.95
Number of input reads | 187980796
Average input read length | 258
UNIQUE READS:
Uniquely mapped reads number | 180248338
Uniquely mapped reads % | 95.89%
Average mapped length | 257.43
Number of splices: Total | 230332553
Number of splices: Annotated (sjdb) | 227349319
Number of splices: GT/AG | 227731966
Number of splices: GC/AG | 1330980
Number of splices: AT/AC | 180273
Number of splices: Non-canonical | 1089334
Mismatch rate per base, % | 0.19%
Deletion rate per base | 0.03%
Deletion average length | 2.16
Insertion rate per base | 0.00%
Insertion average length | 1.49
MULTI-MAPPING READS:
Number of reads mapped to multiple loci | 6001108
% of reads mapped to multiple loci | 3.19%
Number of reads mapped to too many loci | 199519
% of reads mapped to too many loci | 0.11%
UNMAPPED READS:
Number of reads unmapped: too many mismatches | 0
% of reads unmapped: too many mismatches | 0.00%
Number of reads unmapped: too short | 1353691
% of reads unmapped: too short | 0.72%
Number of reads unmapped: other | 178140
% of reads unmapped: other | 0.09%
CHIMERIC READS:
Number of chimeric reads | 0
% of chimeric reads | 0.00%