Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/31/1644b841b1d29d009b9f275d7e19a9/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/31/1644b841b1d29d009b9f275d7e19a9/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/29704484d70eb924bee3c3996ec642/tih_rna_sample_00149_B23WHTKLT4_2_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/29704484d70eb924bee3c3996ec642/tih_rna_sample_00149_B23WHTKLT4_2_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory