Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/f1758162dbe5d1660ffb9a3e72a64b/659_ciJ-T1-TRNA-1_B23WHTKLT4_1.features.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/bd7366521eab7743d812e6d0e70cfa/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/bd7366521eab7743d812e6d0e70cfa/.command.run
==> STAGING COMPLETE (3 inputs)

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  659_ciJ-T1-TRNA-1_B23WHTKLT4_1: vaf_p90=1.000000 -> CLEAN

Output saved to: 659_ciJ-T1-TRNA-1_B23WHTKLT4_1.predictions.csv
Summary: 0/1 samples flagged as contaminated