Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/de6dfcd18df87c44d6c4ef1491ef8f/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/de6dfcd18df87c44d6c4ef1491ef8f/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/1a8ddd5d8c27765c221e0f4a07f333/tih_rna_sample_00089_B23WHTKLT4_2_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/1a8ddd5d8c27765c221e0f4a07f333/tih_rna_sample_00089_B23WHTKLT4_2_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory